RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 A0A1B0GW15 77 aa10.63□□□□□ -0.71
CDK11A-220ENST00000492390 COX19Q49B96 90 aa10.63□□□□□ -0.71
CDK11A-220ENST00000492390 WDR73Q6P4I2 378 aa10.63□□□□□ -0.71
CDK11A-220ENST00000492390 OR10AG1Q8NH19 301 aa10.63□□□□□ -0.71
CDK11A-220ENST00000492390 NXPH4O95158 308 aa10.62□□□□□ -0.71
CDK11A-220ENST00000492390 HOXA5P20719 270 aa10.62□□□□□ -0.71
CDK11A-220ENST00000492390 RPS10P46783 165 aaKnown RBP10.62□□□□□ -0.71
CDK11A-220ENST00000492390 CACNG7P62955 275 aa10.62□□□□□ -0.71
CDK11A-220ENST00000492390 ZNF415Q09FC8 603 aa10.62□□□□□ -0.71
CDK11A-220ENST00000492390 LINC00612Q8N6U2 182 aa10.62□□□□□ -0.71
CDK11A-220ENST00000492390 GATD1Q8NB37 220 aa10.62□□□□□ -0.71
CDK11A-220ENST00000492390 GNB1LQ9BYB4 327 aa10.62□□□□□ -0.71
CDK11A-220ENST00000492390 TNFRSF18Q9Y5U5 241 aa10.62□□□□□ -0.71
CDK11A-220ENST00000492390 MUC21A0A0G2JKD1 596 aa10.61□□□□□ -0.71
CDK11A-220ENST00000492390 MUC21A0A140T8X8 626 aa10.61□□□□□ -0.71
CDK11A-220ENST00000492390 HLA-DQA1P01909 254 aa10.61□□□□□ -0.71
CDK11A-220ENST00000492390 MT-ND6P03923 174 aa10.61□□□□□ -0.71
CDK11A-220ENST00000492390 S100A8P05109 93 aa10.61□□□□□ -0.71
CDK11A-220ENST00000492390 HTN1P15515 57 aa10.61□□□□□ -0.71
CDK11A-220ENST00000492390 CAMPP49913 170 aa10.61□□□□□ -0.71
CDK11A-220ENST00000492390 TMEM136Q6ZRR5 245 aa10.61□□□□□ -0.71
CDK11A-220ENST00000492390 RNASE8Q8TDE3 154 aaKnown RBP10.61□□□□□ -0.71
CDK11A-220ENST00000492390 TMEM263Q8WUH6 116 aaKnown RBP10.61□□□□□ -0.71
CDK11A-220ENST00000492390 PHLDA3Q9Y5J5 127 aa10.61□□□□□ -0.71
CDK11A-220ENST00000492390 SNURFLB1AK76 121 aa10.6□□□□□ -0.71
CDK11A-220ENST00000492390 NTF3P20783 257 aa10.6□□□□□ -0.71
CDK11A-220ENST00000492390 SPANXN1Q5VSR9 72 aa10.6□□□□□ -0.71
CDK11A-220ENST00000492390 ZFP82Q8N141 532 aa10.6□□□□□ -0.71
CDK11A-220ENST00000492390 C11orf72Q8NBR9 251 aa10.6□□□□□ -0.71
CDK11A-220ENST00000492390 A0A096LPF7 62 aa10.59□□□□□ -0.71
CDK11A-220ENST00000492390 RAB4BP61018 213 aa10.59□□□□□ -0.71
CDK11A-220ENST00000492390 TWIST1Q15672 202 aa10.59□□□□□ -0.71
CDK11A-220ENST00000492390 M0R381 172 aa10.58□□□□□ -0.72
CDK11A-220ENST00000492390 TRGC2P03986 189 aa10.58□□□□□ -0.72
CDK11A-220ENST00000492390 SSTP61278 116 aa10.58□□□□□ -0.72
CDK11A-220ENST00000492390 MSRB1Q9NZV6 116 aa10.58□□□□□ -0.72
CDK11A-220ENST00000492390 TRAPPC1Q9Y5R8 145 aa10.58□□□□□ -0.72
CDK11A-220ENST00000492390 IGLV5-52A0A0A0MRZ9 124 aa10.57□□□□□ -0.72
CDK11A-220ENST00000492390 PHOX2AO14813 284 aa10.57□□□□□ -0.72
CDK11A-220ENST00000492390 MRPL18Q9H0U6 180 aaKnown RBP10.57□□□□□ -0.72
CDK11A-220ENST00000492390 GSN-AS1Q9NRJ2 163 aa10.57□□□□□ -0.72
CDK11A-220ENST00000492390 TRAV9-2A0A087WT02 112 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 GAGE12BA1L429 117 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 GAGE7O76087 117 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 TRGC1P0CF51 173 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 GAGE12FP0CL80 117 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 GAGE12GP0CL81 117 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 GAGE12IP0CL82 117 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 FABP9Q0Z7S8 132 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 DMRTA1Q5VZB9 504 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 NTN5Q8WTR8 489 aaPredicted RBP10.56□□□□□ -0.72
CDK11A-220ENST00000492390 PTH2Q96A98 100 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 VSIG2Q96IQ7 327 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 AP1S3Q96PC3 154 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 SPXQ9BT56 116 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 TMEM191AQ9H0A3 160 aa10.56□□□□□ -0.72
CDK11A-220ENST00000492390 LRP1Q07954 4544 aaKnown RBP10.55□□□□□ -0.72
CDK11A-220ENST00000492390 C1orf196B1AJZ1 125 aa10.55□□□□□ -0.72
CDK11A-220ENST00000492390 M0R2P5 195 aa10.55□□□□□ -0.72
CDK11A-220ENST00000492390 OXTP01178 125 aa10.55□□□□□ -0.72
CDK11A-220ENST00000492390 SLAQ13239 276 aa10.55□□□□□ -0.72
CDK11A-220ENST00000492390 K7EP13 123 aa10.54□□□□□ -0.72
CDK11A-220ENST00000492390 APCSP02743 223 aa10.54□□□□□ -0.72
CDK11A-220ENST00000492390 PIK3CD-AS1Q5SR53 167 aa10.54□□□□□ -0.72
CDK11A-220ENST00000492390 SMIM15Q7Z3B0 74 aa10.54□□□□□ -0.72
CDK11A-220ENST00000492390 EVI2AP22794 236 aa10.53□□□□□ -0.72
CDK11A-220ENST00000492390 DAZ2Q13117 558 aaKnown RBP10.53□□□□□ -0.72
CDK11A-220ENST00000492390 ZNF876PQ49A33 203 aa10.53□□□□□ -0.72
CDK11A-220ENST00000492390 FAM104BQ5XKR9 115 aa10.53□□□□□ -0.72
CDK11A-220ENST00000492390 AMN1Q8IY45 258 aa10.53□□□□□ -0.72
CDK11A-220ENST00000492390 LINC00528Q8N1L1 170 aa10.53□□□□□ -0.72
CDK11A-220ENST00000492390 FAM30AQ9NZY2 134 aa10.53□□□□□ -0.72
CDK11A-220ENST00000492390 RAB5BP61020 215 aa10.52□□□□□ -0.73
CDK11A-220ENST00000492390 MRPL16Q9NX20 251 aaKnown RBP10.52□□□□□ -0.73
CDK11A-220ENST00000492390 TMA7Q9Y2S6 64 aaKnown RBP10.52□□□□□ -0.73
CDK11A-220ENST00000492390 KIAA1644Q3SXP7 199 aa10.51□□□□□ -0.73
CDK11A-220ENST00000492390 C14orf178Q8N769 122 aaPredicted RBP10.51□□□□□ -0.73
CDK11A-220ENST00000492390 RNF185Q96GF1 192 aa10.51□□□□□ -0.73
CDK11A-220ENST00000492390 DPH3P1Q9H4G8 78 aa10.51□□□□□ -0.73
CDK11A-220ENST00000492390 DNAH8Q96JB1 4490 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 HIST1H2BKO60814 126 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 HIST1H2BJP06899 126 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 RAB4AP20338 218 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 HIST1H2BOP23527 126 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 HIST1H2BBP33778 126 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 HIST1H2BDP58876 126 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 HIST1H2BCP62807 126 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 HIST2H2BEQ16778 126 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.5□□□□□ -0.73
CDK11A-220ENST00000492390 RASL10AQ92737 203 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 HIST1H2BHQ93079 126 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 HIST1H2BNQ99877 126 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 HIST1H2BMQ99879 126 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 JPT2Q9H910 190 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 ICOSQ9Y6W8 199 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 KIF25-AS1Q9Y6Z4 181 aa10.5□□□□□ -0.73
CDK11A-220ENST00000492390 TRGV1A0A0A0MS02 117 aa10.49□□□□□ -0.73
CDK11A-220ENST00000492390 A8MWV9 139 aa10.49□□□□□ -0.73
CDK11A-220ENST00000492390 SMIM17P0DL12 118 aa10.49□□□□□ -0.73
CDK11A-220ENST00000492390 MRPL51Q4U2R6 128 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms