RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	ANG	P03950	147 aa	Known RBP	11.68	□□□□□ -0.54
GGA1-223	ENST00000491295	EIF5A	P63241	154 aa	Known RBP	11.68	□□□□□ -0.54
GGA1-223	ENST00000491295	RPL19	P84098	196 aa	Known RBP	11.68	□□□□□ -0.54
GGA1-223	ENST00000491295	TMUB2	Q71RG4	321 aa		11.68	□□□□□ -0.54
GGA1-223	ENST00000491295	C15orf54	Q8N8G6	183 aa		11.68	□□□□□ -0.54
GGA1-223	ENST00000491295	CIRBP-AS1	Q8TBR5	109 aa		11.68	□□□□□ -0.54
GGA1-223	ENST00000491295	CHCHD5	Q9BSY4	110 aa		11.68	□□□□□ -0.54
GGA1-223	ENST00000491295		F5H697	171 aa		11.67	□□□□□ -0.54
GGA1-223	ENST00000491295	SMIM17	P0DL12	118 aa		11.67	□□□□□ -0.54
GGA1-223	ENST00000491295	MPV17L2	Q567V2	206 aa		11.67	□□□□□ -0.54
GGA1-223	ENST00000491295	DGAT2L7P	Q6IED9	249 aa		11.67	□□□□□ -0.54
GGA1-223	ENST00000491295	H2AFB1	P0C5Y9	115 aa		11.66	□□□□□ -0.54
GGA1-223	ENST00000491295	KANTR	A0A1W2PQU2	76 aa		11.65	□□□□□ -0.54
GGA1-223	ENST00000491295	AP1S3	Q96PC3	154 aa		11.65	□□□□□ -0.54
GGA1-223	ENST00000491295	PRR34	Q9NV39	138 aa		11.65	□□□□□ -0.54
GGA1-223	ENST00000491295	KIF25-AS1	Q9Y6Z4	181 aa		11.65	□□□□□ -0.54
GGA1-223	ENST00000491295	OXT	P01178	125 aa		11.64	□□□□□ -0.55
GGA1-223	ENST00000491295	DERL1	Q9BUN8	251 aa		11.64	□□□□□ -0.55
GGA1-223	ENST00000491295	TRBV25-1	A0A075B6N4	114 aa		11.63	□□□□□ -0.55
GGA1-223	ENST00000491295		A0A1B0GV50	99 aa		11.63	□□□□□ -0.55
GGA1-223	ENST00000491295	USP17L23	D6RBM5	183 aa		11.63	□□□□□ -0.55
GGA1-223	ENST00000491295	SMLR1	H3BR10	107 aa		11.63	□□□□□ -0.55
GGA1-223	ENST00000491295		H7C1H1	209 aa		11.63	□□□□□ -0.55
GGA1-223	ENST00000491295	RPL35	P42766	123 aa	Known RBP	11.63	□□□□□ -0.55
GGA1-223	ENST00000491295	KRTAP10-4	P60372	401 aa	Predicted RBP	11.63	□□□□□ -0.55
GGA1-223	ENST00000491295	SERTAD4-AS1	Q5TG53	156 aa		11.63	□□□□□ -0.55
GGA1-223	ENST00000491295	NTM-AS1	Q6ZSK4	140 aa		11.63	□□□□□ -0.55
GGA1-223	ENST00000491295	MANBAL	Q9NQG1	85 aa		11.63	□□□□□ -0.55
GGA1-223	ENST00000491295	BCL2L11	O43521	198 aa		11.62	□□□□□ -0.55
GGA1-223	ENST00000491295	RPS20	P60866	119 aa	Known RBP	11.62	□□□□□ -0.55
GGA1-223	ENST00000491295	IQCJ	Q1A5X6	159 aa		11.62	□□□□□ -0.55
GGA1-223	ENST00000491295	MUC21	A0A0G2JKD1	596 aa		11.61	□□□□□ -0.55
GGA1-223	ENST00000491295	MUC21	A0A140T8X8	626 aa		11.61	□□□□□ -0.55
GGA1-223	ENST00000491295	HLA-DQA1	P01909	254 aa		11.61	□□□□□ -0.55
GGA1-223	ENST00000491295	RBX1	P62877	108 aa		11.61	□□□□□ -0.55
GGA1-223	ENST00000491295	C9orf163	Q8N9P6	203 aa		11.61	□□□□□ -0.55
GGA1-223	ENST00000491295	CLRN3	Q8NCR9	226 aa		11.61	□□□□□ -0.55
GGA1-223	ENST00000491295	C11orf52	Q96A22	123 aa		11.61	□□□□□ -0.55
GGA1-223	ENST00000491295	DAZAP1	Q96EP5	407 aa	Known RBP	11.61	□□□□□ -0.55
GGA1-223	ENST00000491295	SMIM12	Q96EX1	92 aa		11.61	□□□□□ -0.55
GGA1-223	ENST00000491295	TRAV1-1	A0A0B4J248	108 aa		11.6	□□□□□ -0.55
GGA1-223	ENST00000491295	IGHV1-24	A0A0C4DH33	117 aa		11.6	□□□□□ -0.55
GGA1-223	ENST00000491295	TEX46	H3BTG2	121 aa		11.6	□□□□□ -0.55
GGA1-223	ENST00000491295		M0QY20	66 aa		11.6	□□□□□ -0.55
GGA1-223	ENST00000491295	SST	P61278	116 aa		11.6	□□□□□ -0.55
GGA1-223	ENST00000491295	CACNG7	P62955	275 aa		11.6	□□□□□ -0.55
GGA1-223	ENST00000491295	LINC00269	Q8N2A0	174 aa		11.6	□□□□□ -0.55
GGA1-223	ENST00000491295	XKRY2	A2RUG3	117 aa		11.59	□□□□□ -0.55
GGA1-223	ENST00000491295		F2Z2F3	143 aa		11.59	□□□□□ -0.55
GGA1-223	ENST00000491295	PRSS1	P07477	247 aa		11.59	□□□□□ -0.55
GGA1-223	ENST00000491295	IGLC6	P0CF74	106 aa		11.59	□□□□□ -0.55
GGA1-223	ENST00000491295	RAB5C	P51148	216 aa		11.59	□□□□□ -0.55
GGA1-223	ENST00000491295	GAGE6	Q13070	117 aa		11.59	□□□□□ -0.55
GGA1-223	ENST00000491295	FER1L6-AS1	Q8NA97	138 aa		11.59	□□□□□ -0.55
GGA1-223	ENST00000491295	TRAV8-4	A0A0B4J246	113 aa		11.58	□□□□□ -0.56
GGA1-223	ENST00000491295		A0A1B0GUV1	79 aa		11.58	□□□□□ -0.56
GGA1-223	ENST00000491295		P01737	135 aa		11.58	□□□□□ -0.56
GGA1-223	ENST00000491295	EIF5AL1	Q6IS14	154 aa	Known RBP	11.58	□□□□□ -0.56
GGA1-223	ENST00000491295	KRTAP26-1	Q6PEX3	210 aa		11.58	□□□□□ -0.56
GGA1-223	ENST00000491295	GNG13	Q9P2W3	67 aa		11.58	□□□□□ -0.56
GGA1-223	ENST00000491295	CENPW	Q5EE01	88 aa		11.57	□□□□□ -0.56
GGA1-223	ENST00000491295	OR2D3	Q8NGH3	330 aa		11.57	□□□□□ -0.56
GGA1-223	ENST00000491295	BIN3	Q9NQY0	253 aa		11.57	□□□□□ -0.56
GGA1-223	ENST00000491295	C19orf71	A6NCJ1	209 aa		11.56	□□□□□ -0.56
GGA1-223	ENST00000491295	GZMB	P10144	247 aa		11.56	□□□□□ -0.56
GGA1-223	ENST00000491295	RPL37A	P61513	92 aa	Known RBP	11.56	□□□□□ -0.56
GGA1-223	ENST00000491295	CCL20	P78556	96 aa		11.56	□□□□□ -0.56
GGA1-223	ENST00000491295	REG3A	Q06141	175 aa		11.56	□□□□□ -0.56
GGA1-223	ENST00000491295	TPPP3	Q9BW30	176 aa		11.56	□□□□□ -0.56
GGA1-223	ENST00000491295	PDE6D	O43924	150 aa		11.55	□□□□□ -0.56
GGA1-223	ENST00000491295	MGP	P08493	103 aa		11.55	□□□□□ -0.56
GGA1-223	ENST00000491295	TRGC1	P0CF51	173 aa		11.55	□□□□□ -0.56
GGA1-223	ENST00000491295	GNG4	P50150	75 aa		11.55	□□□□□ -0.56
GGA1-223	ENST00000491295	SUMO4	Q6EEV6	95 aa		11.55	□□□□□ -0.56
GGA1-223	ENST00000491295	WDR73	Q6P4I2	378 aa		11.55	□□□□□ -0.56
GGA1-223	ENST00000491295	RASL11A	Q6T310	242 aa		11.55	□□□□□ -0.56
GGA1-223	ENST00000491295	PGLYRP4	Q96LB8	373 aa		11.55	□□□□□ -0.56
GGA1-223	ENST00000491295	CLPSL2	Q6UWE3	100 aa		11.54	□□□□□ -0.56
GGA1-223	ENST00000491295	SDIM1	Q6ZPB5	146 aa		11.54	□□□□□ -0.56
GGA1-223	ENST00000491295	TMEM243	Q9BU79	118 aa		11.54	□□□□□ -0.56
GGA1-223	ENST00000491295	NIT2	Q9NQR4	276 aa		11.54	□□□□□ -0.56
GGA1-223	ENST00000491295	CNBP	P62633	177 aa	Known RBP	11.53	□□□□□ -0.56
GGA1-223	ENST00000491295	IFNA1	P01562	189 aa		11.52	□□□□□ -0.57
GGA1-223	ENST00000491295	NKX2-5	P52952	324 aa	Predicted RBP	11.52	□□□□□ -0.57
GGA1-223	ENST00000491295	MEF2B	Q02080	365 aa	Predicted RBP	11.52	□□□□□ -0.57
GGA1-223	ENST00000491295	C9orf62	Q8N4C0	152 aa		11.52	□□□□□ -0.57
GGA1-223	ENST00000491295	C20orf203	Q8NBC4	194 aa		11.52	□□□□□ -0.57
GGA1-223	ENST00000491295	DPH3P1	Q9H4G8	78 aa		11.52	□□□□□ -0.57
GGA1-223	ENST00000491295	RAB19	A4D1S5	217 aa		11.51	□□□□□ -0.57
GGA1-223	ENST00000491295	NTF3	P20783	257 aa		11.51	□□□□□ -0.57
GGA1-223	ENST00000491295	AP5S1	Q9NUS5	200 aa		11.51	□□□□□ -0.57
GGA1-223	ENST00000491295	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.5	□□□□□ -0.57
GGA1-223	ENST00000491295	hDV102S1	A0JD36	115 aa		11.5	□□□□□ -0.57
GGA1-223	ENST00000491295	UBE2L6	O14933	153 aa		11.5	□□□□□ -0.57
GGA1-223	ENST00000491295	TAGLN2	P37802	199 aa	Known RBP	11.5	□□□□□ -0.57
GGA1-223	ENST00000491295	SULT1A2	P50226	295 aa		11.5	□□□□□ -0.57
GGA1-223	ENST00000491295	CIRBP	Q14011	172 aa	Known RBP	11.5	□□□□□ -0.57
GGA1-223	ENST00000491295	LYZL1	Q6UWQ5	148 aa		11.5	□□□□□ -0.57
GGA1-223	ENST00000491295	RNF185	Q96GF1	192 aa		11.5	□□□□□ -0.57
GGA1-223	ENST00000491295	MED9	Q9NWA0	146 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms