RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 LINC00587B1AMM8 73 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 H3BNG1 76 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 SSNA1O43805 119 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 COX7A2P2O60397 106 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 CST7O76096 145 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 TCRBP04435 133 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 GIPP09681 153 aaPredicted RBP1.73□□□□□ -2.13
PHC3-213ENST00000491258 HIST1H1EP10412 219 aaKnown RBP1.73□□□□□ -2.13
PHC3-213ENST00000491258 IL7P13232 177 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 S100A11P31949 105 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 LEPP41159 167 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 INPP1P49441 399 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 ERCC8Q13216 396 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 CLINT1Q14677 625 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 GCSAMLQ5JQS6 135 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 C10orf113Q5VZT2 155 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 MIC13Q5XKP0 118 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 Q6ZTI0 123 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 BOD1L2Q8IYS8 172 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 LINC01561Q8N1V8 128 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 C12orf45Q8N5I9 185 aaPredicted RBP1.73□□□□□ -2.13
PHC3-213ENST00000491258 C11orf72Q8NBR9 251 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 TMEM263Q8WUH6 116 aaKnown RBP1.73□□□□□ -2.13
PHC3-213ENST00000491258 GNPNAT1Q96EK6 184 aaPredicted RBP1.73□□□□□ -2.13
PHC3-213ENST00000491258 SFRP2Q96HF1 295 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 FAM19A4Q96LR4 140 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 C2orf50Q96LR7 162 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 LINC00477Q96M19 166 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 C18orf15Q96N68 181 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 ODF3Q96PU9 254 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 LINC00467Q9BRT7 94 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 SLC50A1Q9BRV3 221 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 C2orf88Q9BSF0 95 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 UPK3BQ9BT76 320 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 AGPAT4-IT1Q9H0P7 198 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 C20orf85Q9H1P6 137 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 SLC39A9Q9NUM3 307 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 UQCC1Q9NVA1 299 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 ZNF586Q9NXT0 402 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 TMEM14CQ9P0S9 112 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 MRPS16Q9Y3D3 137 aaKnown RBP1.73□□□□□ -2.13
PHC3-213ENST00000491258 HSPB11Q9Y547 144 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 PXMP4Q9Y6I8 212 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 SORL1Q92673 2214 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 HSPG2P98160 4391 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 KIAA2026Q5HYC2 2103 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 PKHD1P08F94 4074 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 TRGV2A0A075B6R0 118 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 A0A096LPF7 62 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 TRGV1A0A0A0MS02 117 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 TRAV12-3A0A0B4J271 114 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 A0A1B0GWB2 263 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 IGSF23A1L1A6 192 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 C7orf71A4D174 169 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 M0R3E3 92 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 RS1O15537 224 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 LYRM1O43325 122 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 SPINK4O60575 86 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 PPBPP02775 128 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 RLN2P04090 185 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 SLC25A5P05141 298 aaKnown RBP1.72□□□□□ -2.13
PHC3-213ENST00000491258 NMBP08949 121 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 OR10J4P0C629 311 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 CRISP2P16562 243 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 RNASE4P34096 147 aaKnown RBP1.72□□□□□ -2.13
PHC3-213ENST00000491258 SULT1A1P50225 295 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 PDE6HQ13956 83 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 ZNF846Q147U1 533 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 ATP6V1FQ16864 119 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 C6orf226Q5I0X4 101 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 TTC32Q5I0X7 151 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 Q6ZQT7 251 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 Q6ZRN7 208 aaPredicted RBP1.72□□□□□ -2.13
PHC3-213ENST00000491258 SPATA12Q7Z6I5 190 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 EXOC3-AS1Q8N2X6 119 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 ZFAND2AQ8N6M9 145 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 OR1L4Q8NGR5 311 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 FAM167A-AS1Q96KT0 104 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 PGLYRP4Q96LB8 373 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 VPS25Q9BRG1 176 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 SPANXB1Q9NS25 103 aaPredicted RBP1.72□□□□□ -2.13
PHC3-213ENST00000491258 LYRM2Q9NU23 88 aaPredicted RBP1.72□□□□□ -2.13
PHC3-213ENST00000491258 KLF12Q9Y4X4 402 aa1.72□□□□□ -2.13
PHC3-213ENST00000491258 LSM5Q9Y4Y9 91 aaKnown RBP1.72□□□□□ -2.13
PHC3-213ENST00000491258 APOBP04114 4563 aaKnown RBP1.72□□□□□ -2.13
PHC3-213ENST00000491258 IGKV2-40A0A087WW87 121 aaPredicted RBP1.71□□□□□ -2.14
PHC3-213ENST00000491258 A0A1B0GV90 55 aa1.71□□□□□ -2.14
PHC3-213ENST00000491258 ARPC5O15511 151 aa1.71□□□□□ -2.14
PHC3-213ENST00000491258 MPDU1O75352 247 aa1.71□□□□□ -2.14
PHC3-213ENST00000491258 SIX6O95475 246 aa1.71□□□□□ -2.14
PHC3-213ENST00000491258 IGKV2D-40P01614 121 aaPredicted RBP1.71□□□□□ -2.14
PHC3-213ENST00000491258 GPX1P07203 203 aa1.71□□□□□ -2.14
PHC3-213ENST00000491258 NBEAP1P0C6P0 100 aa1.71□□□□□ -2.14
PHC3-213ENST00000491258 PYYP10082 97 aa1.71□□□□□ -2.14
PHC3-213ENST00000491258 PVALBP20472 110 aaPredicted RBP1.71□□□□□ -2.14
PHC3-213ENST00000491258 FGF7P21781 194 aa1.71□□□□□ -2.14
PHC3-213ENST00000491258 RPL35P42766 123 aaKnown RBP1.71□□□□□ -2.14
PHC3-213ENST00000491258 ZNF138P52744 262 aa1.71□□□□□ -2.14
PHC3-213ENST00000491258 TCL1AP56279 114 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms