RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 K7ERU9 68 aa-0.07□□□□□ -2.42
SEMA3A-207ENST00000490883 UBE2D1P51668 147 aa-0.07□□□□□ -2.42
SEMA3A-207ENST00000490883 EDDM3BP56851 147 aa-0.07□□□□□ -2.42
SEMA3A-207ENST00000490883 SMIM21Q3B7S5 101 aa-0.07□□□□□ -2.42
SEMA3A-207ENST00000490883 SCIMPQ6UWF3 145 aa-0.07□□□□□ -2.42
SEMA3A-207ENST00000490883 ANP32BQ92688 251 aaKnown RBP-0.07□□□□□ -2.42
SEMA3A-207ENST00000490883 COPZ2Q9P299 210 aa-0.07□□□□□ -2.42
SEMA3A-207ENST00000490883 FHAD1B1AJZ9 1412 aa-0.07□□□□□ -2.42
SEMA3A-207ENST00000490883 ANKRD17O75179 2603 aaKnown RBP-0.07□□□□□ -2.42
SEMA3A-207ENST00000490883 TMEM2Q9UHN6 1383 aa-0.07□□□□□ -2.42
SEMA3A-207ENST00000490883 MACF1Q9UPN3 7388 aaKnown RBP-0.08□□□□□ -2.42
SEMA3A-207ENST00000490883 RRAS2P62070 204 aaPredicted RBP-0.08□□□□□ -2.42
SEMA3A-207ENST00000490883 TSTD1Q8NFU3 115 aa-0.08□□□□□ -2.42
SEMA3A-207ENST00000490883 FAM213BQ8TBF2 198 aa-0.08□□□□□ -2.42
SEMA3A-207ENST00000490883 WFDC6Q9BQY6 131 aa-0.08□□□□□ -2.42
SEMA3A-207ENST00000490883 PSMG3Q9BT73 122 aaPredicted RBP-0.08□□□□□ -2.42
SEMA3A-207ENST00000490883 SPRR2GQ9BYE4 73 aa-0.08□□□□□ -2.42
SEMA3A-207ENST00000490883 A6NIN4 97 aa-0.09□□□□□ -2.42
SEMA3A-207ENST00000490883 RPL7L1Q6DKI1 246 aaKnown RBP-0.09□□□□□ -2.42
SEMA3A-207ENST00000490883 SCP2D1Q9UJQ7 156 aa-0.09□□□□□ -2.42
SEMA3A-207ENST00000490883 U3KQA8 63 aa-0.09□□□□□ -2.42
SEMA3A-207ENST00000490883 IFNA17P01571 189 aa-0.1□□□□□ -2.43
SEMA3A-207ENST00000490883 IL5P05113 134 aa-0.1□□□□□ -2.43
SEMA3A-207ENST00000490883 PIPP12273 146 aaPredicted RBP-0.1□□□□□ -2.43
SEMA3A-207ENST00000490883 RPS25P62851 125 aaKnown RBP-0.1□□□□□ -2.43
SEMA3A-207ENST00000490883 SDF2Q99470 211 aa-0.1□□□□□ -2.43
SEMA3A-207ENST00000490883 CBLN1P23435 193 aa-0.11□□□□□ -2.43
SEMA3A-207ENST00000490883 GCHFRP30047 84 aa-0.11□□□□□ -2.43
SEMA3A-207ENST00000490883 GUCA1AP43080 201 aaPredicted RBP-0.11□□□□□ -2.43
SEMA3A-207ENST00000490883 Q5VV11 94 aa-0.11□□□□□ -2.43
SEMA3A-207ENST00000490883 ZNF818PQ6ZRF7 136 aa-0.11□□□□□ -2.43
SEMA3A-207ENST00000490883 SIPA1L3O60292 1781 aaPredicted RBP-0.11□□□□□ -2.43
SEMA3A-207ENST00000490883 DAPK1P53355 1430 aa-0.12□□□□□ -2.43
SEMA3A-207ENST00000490883 WNK2Q9Y3S1 2297 aa-0.12□□□□□ -2.43
SEMA3A-207ENST00000490883 NDUFB6O95139 128 aa-0.12□□□□□ -2.43
SEMA3A-207ENST00000490883 COPZ1P61923 177 aa-0.12□□□□□ -2.43
SEMA3A-207ENST00000490883 SPTSSAQ969W0 71 aa-0.12□□□□□ -2.43
SEMA3A-207ENST00000490883 ZMYM4Q5VZL5 1548 aa-0.13□□□□□ -2.43
SEMA3A-207ENST00000490883 SPTBN2O15020 2390 aa-0.13□□□□□ -2.43
SEMA3A-207ENST00000490883 GOLGA3Q08378 1498 aa-0.13□□□□□ -2.43
SEMA3A-207ENST00000490883 G3V318 75 aa-0.13□□□□□ -2.43
SEMA3A-207ENST00000490883 TPT1P8Q9HAU6 139 aa-0.13□□□□□ -2.43
SEMA3A-207ENST00000490883 ABCA2Q9BZC7 2435 aa-0.14□□□□□ -2.43
SEMA3A-207ENST00000490883 KCNRGQ8N5I3 272 aa-0.14□□□□□ -2.43
SEMA3A-207ENST00000490883 SPTSSBQ8NFR3 76 aa-0.14□□□□□ -2.43
SEMA3A-207ENST00000490883 TMEM191AQ9H0A3 160 aa-0.14□□□□□ -2.43
SEMA3A-207ENST00000490883 ZNF292O60281 2723 aa-0.15□□□□□ -2.43
SEMA3A-207ENST00000490883 APOC4-APOC2K7ER74 178 aa-0.15□□□□□ -2.43
SEMA3A-207ENST00000490883 SSBP3-AS1Q7Z2R9 100 aa-0.15□□□□□ -2.43
SEMA3A-207ENST00000490883 TCEAL4Q96EI5 215 aa-0.15□□□□□ -2.43
SEMA3A-207ENST00000490883 DPH3Q96FX2 82 aa-0.15□□□□□ -2.43
SEMA3A-207ENST00000490883 FAM208BQ5VWN6 2430 aa-0.16□□□□□ -2.43
SEMA3A-207ENST00000490883 TRAV1-2A0A0B4J238 106 aa-0.16□□□□□ -2.44
SEMA3A-207ENST00000490883 TRBV10-3A0A0K0K1G6 114 aa-0.16□□□□□ -2.44
SEMA3A-207ENST00000490883 ZNF815PA8K554 130 aa-0.16□□□□□ -2.44
SEMA3A-207ENST00000490883 SNCGO76070 127 aa-0.16□□□□□ -2.44
SEMA3A-207ENST00000490883 CCL8P80075 99 aa-0.16□□□□□ -2.44
SEMA3A-207ENST00000490883 SMCO1Q147U7 214 aa-0.16□□□□□ -2.44
SEMA3A-207ENST00000490883 UBE2DNLQ8IWF7 75 aa-0.16□□□□□ -2.44
SEMA3A-207ENST00000490883 LINC00312Q9Y6C7 94 aa-0.16□□□□□ -2.44
SEMA3A-207ENST00000490883 PIN1P1O15428 100 aa-0.18□□□□□ -2.44
SEMA3A-207ENST00000490883 S100A7L2Q5SY68 101 aa-0.18□□□□□ -2.44
SEMA3A-207ENST00000490883 PFDN5Q99471 154 aa-0.18□□□□□ -2.44
SEMA3A-207ENST00000490883 CYP4F30PQ9H0H9 118 aa-0.18□□□□□ -2.44
SEMA3A-207ENST00000490883 CCDC167Q9P0B6 97 aa-0.18□□□□□ -2.44
SEMA3A-207ENST00000490883 C2CD3Q4AC94 2353 aa-0.18□□□□□ -2.44
SEMA3A-207ENST00000490883 PTPRQQ9UMZ3 2332 aa-0.19□□□□□ -2.44
SEMA3A-207ENST00000490883 BAGE3Q86Y29 109 aa-0.19□□□□□ -2.44
SEMA3A-207ENST00000490883 PAIP2BQ9ULR5 123 aaKnown RBP-0.19□□□□□ -2.44
SEMA3A-207ENST00000490883 MYH9P35579 1960 aaKnown RBP-0.19□□□□□ -2.44
SEMA3A-207ENST00000490883 LRRC37A3O60309 1634 aa-0.2□□□□□ -2.44
SEMA3A-207ENST00000490883 AKAP6Q13023 2319 aa-0.2□□□□□ -2.44
SEMA3A-207ENST00000490883 ZNF518AQ6AHZ1 1483 aa-0.2□□□□□ -2.44
SEMA3A-207ENST00000490883 IFT140Q96RY7 1462 aa-0.2□□□□□ -2.44
SEMA3A-207ENST00000490883 SPINK8P0C7L1 97 aa-0.2□□□□□ -2.44
SEMA3A-207ENST00000490883 NCOR1O75376 2440 aa-0.21□□□□□ -2.44
SEMA3A-207ENST00000490883 IFT172Q9UG01 1749 aa-0.21□□□□□ -2.44
SEMA3A-207ENST00000490883 SIX6O95475 246 aa-0.21□□□□□ -2.44
SEMA3A-207ENST00000490883 SEC11CQ9BY50 192 aa-0.21□□□□□ -2.44
SEMA3A-207ENST00000490883 CNFNQ9BYD5 112 aa-0.21□□□□□ -2.44
SEMA3A-207ENST00000490883 HMCN2Q8NDA2 5059 aa-0.21□□□□□ -2.44
SEMA3A-207ENST00000490883 PLCE1Q9P212 2302 aa-0.21□□□□□ -2.44
SEMA3A-207ENST00000490883 A0A0D9SFI3 127 aa-0.22□□□□□ -2.44
SEMA3A-207ENST00000490883 FAM92AA1XBS5 289 aa-0.22□□□□□ -2.44
SEMA3A-207ENST00000490883 CACNA1AO00555 2505 aa-0.22□□□□□ -2.44
SEMA3A-207ENST00000490883 CASKIN1Q8WXD9 1431 aa-0.22□□□□□ -2.45
SEMA3A-207ENST00000490883 DOPEY2Q9Y3R5 2298 aa-0.22□□□□□ -2.45
SEMA3A-207ENST00000490883 GRIN2AQ12879 1464 aa-0.22□□□□□ -2.45
SEMA3A-207ENST00000490883 CSMD3Q7Z407 3707 aa-0.23□□□□□ -2.45
SEMA3A-207ENST00000490883 PI4KAP42356 2102 aa-0.23□□□□□ -2.45
SEMA3A-207ENST00000490883 HCG22E2RYF7 251 aa-0.23□□□□□ -2.45
SEMA3A-207ENST00000490883 SMIM6P0DI80 62 aa-0.23□□□□□ -2.45
SEMA3A-207ENST00000490883 ARPC4P59998 168 aa-0.23□□□□□ -2.45
SEMA3A-207ENST00000490883 SPEF2Q9C093 1822 aa-0.23□□□□□ -2.45
SEMA3A-207ENST00000490883 MYH8P13535 1937 aa-0.23□□□□□ -2.45
SEMA3A-207ENST00000490883 PXDNQ92626 1479 aa-0.23□□□□□ -2.45
SEMA3A-207ENST00000490883 PLXNB2O15031 1838 aa-0.24□□□□□ -2.45
SEMA3A-207ENST00000490883 NSD1Q96L73 2696 aaPredicted RBP-0.24□□□□□ -2.45
SEMA3A-207ENST00000490883 SPAARA0A1B0GVQ0 90 aa-0.24□□□□□ -2.45
SEMA3A-207ENST00000490883 IFITM1P13164 125 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms