RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 ZNF56Q15929 161 aa9.79□□□□□ -0.84
TNXB-206ENST00000490077 TMEM170BQ5T4T1 132 aa9.79□□□□□ -0.84
TNXB-206ENST00000490077 HIGD1BQ9P298 99 aa9.79□□□□□ -0.84
TNXB-206ENST00000490077 COX6B1P14854 86 aa9.79□□□□□ -0.84
TNXB-206ENST00000490077 CRIP2P52943 208 aaPredicted RBP9.79□□□□□ -0.84
TNXB-206ENST00000490077 PGPEP1Q9NXJ5 209 aa9.79□□□□□ -0.84
TNXB-206ENST00000490077 IGHV3-16A0A0C4DH30 117 aa9.78□□□□□ -0.84
TNXB-206ENST00000490077 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
TNXB-206ENST00000490077 SCGB1D4Q6XE38 83 aa9.78□□□□□ -0.84
TNXB-206ENST00000490077 Q6ZSV7 163 aa9.78□□□□□ -0.84
TNXB-206ENST00000490077 ANK3Q12955 4377 aaKnown RBP9.78□□□□□ -0.84
TNXB-206ENST00000490077 K7ERU9 68 aa9.78□□□□□ -0.84
TNXB-206ENST00000490077 APRG1Q8IVJ8 170 aa9.78□□□□□ -0.84
TNXB-206ENST00000490077 IGHV3-38A0A0C4DH36 116 aa9.77□□□□□ -0.84
TNXB-206ENST00000490077 RBMY1BA6NDE4 496 aaKnown RBP9.77□□□□□ -0.84
TNXB-206ENST00000490077 RBMY1EA6NEQ0 496 aaKnown RBP9.77□□□□□ -0.84
TNXB-206ENST00000490077 H7C2G1 150 aa9.77□□□□□ -0.84
TNXB-206ENST00000490077 RBMY1DP0C7P1 496 aaKnown RBP9.77□□□□□ -0.84
TNXB-206ENST00000490077 FOXI2Q6ZQN5 318 aa9.77□□□□□ -0.84
TNXB-206ENST00000490077 PDZD2O15018 2839 aa9.77□□□□□ -0.85
TNXB-206ENST00000490077 ZNF843Q8N446 348 aa9.77□□□□□ -0.85
TNXB-206ENST00000490077 FAM104AQ969W3 186 aa9.77□□□□□ -0.85
TNXB-206ENST00000490077 USMG5Q96IX5 58 aa9.77□□□□□ -0.85
TNXB-206ENST00000490077 PLNP26678 52 aa9.76□□□□□ -0.85
TNXB-206ENST00000490077 NPC2P61916 151 aa9.76□□□□□ -0.85
TNXB-206ENST00000490077 ORMDL2Q53FV1 153 aa9.76□□□□□ -0.85
TNXB-206ENST00000490077 SPAG8Q99932 426 aaPredicted RBP9.76□□□□□ -0.85
TNXB-206ENST00000490077 A0A0J9YX75 114 aa9.76□□□□□ -0.85
TNXB-206ENST00000490077 A0A0J9YXV3 536 aa9.76□□□□□ -0.85
TNXB-206ENST00000490077 M0QY20 66 aa9.76□□□□□ -0.85
TNXB-206ENST00000490077 HOXD3P31249 432 aaPredicted RBP9.76□□□□□ -0.85
TNXB-206ENST00000490077 ZNF876PQ49A33 203 aa9.76□□□□□ -0.85
TNXB-206ENST00000490077 TSSC4Q9Y5U2 329 aaPredicted RBP9.76□□□□□ -0.85
TNXB-206ENST00000490077 LOC107984156A0A0G2JMH3 177 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 ELANEP08246 267 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 SRSF9Q13242 221 aaKnown RBP eCLIP9.75□□□□□ -0.85
TNXB-206ENST00000490077 SCGB2A2Q13296 93 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 ARL17AQ8IVW1 177 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 ZNF418Q8TF45 676 aaPredicted RBP9.75□□□□□ -0.85
TNXB-206ENST00000490077 C20orf78Q9BR46 151 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 SPANXB1Q9NS25 103 aaPredicted RBP9.75□□□□□ -0.85
TNXB-206ENST00000490077 PRO0461Q9UI25 63 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 TRAV8-3A0A0A6YYJ7 113 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 HOXA3O43365 443 aaPredicted RBP9.75□□□□□ -0.85
TNXB-206ENST00000490077 FHL3Q13643 280 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 CR1P17927 2039 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 TRAV12-1A0A0B4J245 112 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 SMAGPQ0VAQ4 97 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 RRN3P1Q2M238 152 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 AMELXQ99217 191 aa9.75□□□□□ -0.85
TNXB-206ENST00000490077 NFE4Q86UQ8 179 aa9.74□□□□□ -0.85
TNXB-206ENST00000490077 RAX2Q96IS3 184 aa9.74□□□□□ -0.85
TNXB-206ENST00000490077 LENEPQ9Y5L5 61 aa9.74□□□□□ -0.85
TNXB-206ENST00000490077 PLA2G2AP14555 144 aa9.74□□□□□ -0.85
TNXB-206ENST00000490077 A0A096LNT2 108 aa9.73□□□□□ -0.85
TNXB-206ENST00000490077 A0A0J9YY99 117 aa9.73□□□□□ -0.85
TNXB-206ENST00000490077 TSPAN13O95857 204 aa9.73□□□□□ -0.85
TNXB-206ENST00000490077 DEFB131AP59861 70 aa9.73□□□□□ -0.85
TNXB-206ENST00000490077 KHDC1LQ5JSQ8 128 aa9.73□□□□□ -0.85
TNXB-206ENST00000490077 MRPL16Q9NX20 251 aaKnown RBP9.73□□□□□ -0.85
TNXB-206ENST00000490077 UNC79Q9P2D8 2635 aa9.73□□□□□ -0.85
TNXB-206ENST00000490077 B4DSR2 109 aa9.73□□□□□ -0.85
TNXB-206ENST00000490077 K7EQG2 157 aa9.73□□□□□ -0.85
TNXB-206ENST00000490077 PSMB2P49721 201 aa9.73□□□□□ -0.85
TNXB-206ENST00000490077 TCTEX1D4Q5JR98 221 aa9.73□□□□□ -0.85
TNXB-206ENST00000490077 NXPH4O95158 308 aa9.72□□□□□ -0.85
TNXB-206ENST00000490077 NDUFA7O95182 113 aa9.72□□□□□ -0.85
TNXB-206ENST00000490077 SPXQ9BT56 116 aa9.72□□□□□ -0.85
TNXB-206ENST00000490077 A0A1W2PRX2 142 aa9.71□□□□□ -0.85
TNXB-206ENST00000490077 COTL1Q14019 142 aa9.71□□□□□ -0.85
TNXB-206ENST00000490077 C9orf85Q96MD7 179 aa9.71□□□□□ -0.85
TNXB-206ENST00000490077 CFC1BP0CG36 223 aa9.71□□□□□ -0.86
TNXB-206ENST00000490077 CFC1P0CG37 223 aa9.71□□□□□ -0.86
TNXB-206ENST00000490077 DAND5Q8N907 189 aa9.71□□□□□ -0.86
TNXB-206ENST00000490077 ZNF702PQ9H963 129 aa9.71□□□□□ -0.86
TNXB-206ENST00000490077 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.7□□□□□ -0.86
TNXB-206ENST00000490077 IGHV3OR16-12A0A075B7B8 117 aa9.7□□□□□ -0.86
TNXB-206ENST00000490077 IGHV1OR15-1A0A075B7D0 117 aa9.7□□□□□ -0.86
TNXB-206ENST00000490077 IGKV2-29A2NJV5 120 aaPredicted RBP9.7□□□□□ -0.86
TNXB-206ENST00000490077 AZU1P20160 251 aa9.7□□□□□ -0.86
TNXB-206ENST00000490077 OR5A1Q8NGJ0 315 aa9.7□□□□□ -0.86
TNXB-206ENST00000490077 PKD1L1Q8TDX9 2849 aa9.7□□□□□ -0.86
TNXB-206ENST00000490077 PMVKQ15126 192 aa9.7□□□□□ -0.86
TNXB-206ENST00000490077 TRPT1Q86TN4 253 aaKnown RBP9.7□□□□□ -0.86
TNXB-206ENST00000490077 TMEM61Q8N0U2 210 aa9.7□□□□□ -0.86
TNXB-206ENST00000490077 KIR2DL4Q99706 377 aa9.7□□□□□ -0.86
TNXB-206ENST00000490077 A0A1B0GWB2 263 aa9.69□□□□□ -0.86
TNXB-206ENST00000490077 TMEM238C9JI98 176 aa9.69□□□□□ -0.86
TNXB-206ENST00000490077 TEP1Q99973 2627 aaKnown RBP9.69□□□□□ -0.86
TNXB-206ENST00000490077 VCYO14598 125 aa9.69□□□□□ -0.86
TNXB-206ENST00000490077 POM121L12Q8N7R1 296 aa9.69□□□□□ -0.86
TNXB-206ENST00000490077 NDUFS8O00217 210 aa9.69□□□□□ -0.86
TNXB-206ENST00000490077 TCL1BO95988 128 aa9.69□□□□□ -0.86
TNXB-206ENST00000490077 GAGE13Q4V321 117 aa9.69□□□□□ -0.86
TNXB-206ENST00000490077 C10orf126Q8N4M7 172 aa9.69□□□□□ -0.86
TNXB-206ENST00000490077 ATRQ13535 2644 aa9.68□□□□□ -0.86
TNXB-206ENST00000490077 TRAV2A0A0B4J234 112 aa9.68□□□□□ -0.86
TNXB-206ENST00000490077 TRBV27A0A0K0K1C4 114 aa9.68□□□□□ -0.86
TNXB-206ENST00000490077 IGHV3-30P01768 117 aa9.68□□□□□ -0.86
TNXB-206ENST00000490077 IGHV3-30-5P0DP03 117 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms