RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 USP17L23D6RBM5 183 aa7.74□□□□□ -1.17
SFXN3-207ENST00000489434 LTAP01374 205 aa7.74□□□□□ -1.17
SFXN3-207ENST00000489434 FHITP49789 147 aa7.74□□□□□ -1.17
SFXN3-207ENST00000489434 TMEM97Q5BJF2 176 aa7.74□□□□□ -1.17
SFXN3-207ENST00000489434 DGAT2L7PQ6IED9 249 aa7.74□□□□□ -1.17
SFXN3-207ENST00000489434 ENHOQ6UWT2 76 aa7.74□□□□□ -1.17
SFXN3-207ENST00000489434 ZNF471Q9BX82 626 aaPredicted RBP7.74□□□□□ -1.17
SFXN3-207ENST00000489434 MAP1LC3BQ9GZQ8 125 aa7.74□□□□□ -1.17
SFXN3-207ENST00000489434 F5H697 171 aa7.73□□□□□ -1.17
SFXN3-207ENST00000489434 GIPP09681 153 aaPredicted RBP7.73□□□□□ -1.17
SFXN3-207ENST00000489434 AKR1C3P42330 323 aa7.73□□□□□ -1.17
SFXN3-207ENST00000489434 MPV17L2Q567V2 206 aa7.73□□□□□ -1.17
SFXN3-207ENST00000489434 TMA7Q9Y2S6 64 aaKnown RBP7.73□□□□□ -1.17
SFXN3-207ENST00000489434 UBR4Q5T4S7 5183 aa7.72□□□□□ -1.17
SFXN3-207ENST00000489434 HMSDA8MTL9 139 aa7.72□□□□□ -1.17
SFXN3-207ENST00000489434 S100A9P06702 114 aaKnown RBP7.72□□□□□ -1.17
SFXN3-207ENST00000489434 NEXN-AS1Q8NBZ9 246 aa7.72□□□□□ -1.17
SFXN3-207ENST00000489434 PRSS1P07477 247 aa7.71□□□□□ -1.18
SFXN3-207ENST00000489434 SMIM17P0DL12 118 aa7.71□□□□□ -1.18
SFXN3-207ENST00000489434 SPANXN1Q5VSR9 72 aa7.71□□□□□ -1.18
SFXN3-207ENST00000489434 PRR27Q6MZM9 219 aa7.71□□□□□ -1.18
SFXN3-207ENST00000489434 C9orf163Q8N9P6 203 aa7.71□□□□□ -1.18
SFXN3-207ENST00000489434 TRBV25-1A0A075B6N4 114 aa7.7□□□□□ -1.18
SFXN3-207ENST00000489434 A0A0D9SG52 128 aa7.7□□□□□ -1.18
SFXN3-207ENST00000489434 CXCL1P09341 107 aa7.7□□□□□ -1.18
SFXN3-207ENST00000489434 RPL19P84098 196 aaKnown RBP7.7□□□□□ -1.18
SFXN3-207ENST00000489434 COMMD7Q86VX2 200 aa7.7□□□□□ -1.18
SFXN3-207ENST00000489434 CLRN3Q8NCR9 226 aa7.7□□□□□ -1.18
SFXN3-207ENST00000489434 OR10AG1Q8NH19 301 aa7.7□□□□□ -1.18
SFXN3-207ENST00000489434 PKHD1L1Q86WI1 4243 aa7.69□□□□□ -1.18
SFXN3-207ENST00000489434 CTAG1AP78358 180 aa7.69□□□□□ -1.18
SFXN3-207ENST00000489434 S100A12P80511 92 aa7.69□□□□□ -1.18
SFXN3-207ENST00000489434 LINC00269Q8N2A0 174 aa7.69□□□□□ -1.18
SFXN3-207ENST00000489434 DPH3Q96FX2 82 aa7.69□□□□□ -1.18
SFXN3-207ENST00000489434 DERL1Q9BUN8 251 aa7.69□□□□□ -1.18
SFXN3-207ENST00000489434 PRR34Q9NV39 138 aa7.69□□□□□ -1.18
SFXN3-207ENST00000489434 PAGE4O60829 102 aa7.68□□□□□ -1.18
SFXN3-207ENST00000489434 OR5AL1P0C617 328 aa7.68□□□□□ -1.18
SFXN3-207ENST00000489434 RBX1P62877 108 aa7.68□□□□□ -1.18
SFXN3-207ENST00000489434 GAGE6Q13070 117 aa7.68□□□□□ -1.18
SFXN3-207ENST00000489434 CLPSL2Q6UWE3 100 aa7.68□□□□□ -1.18
SFXN3-207ENST00000489434 BAGE2Q86Y30 109 aa7.68□□□□□ -1.18
SFXN3-207ENST00000489434 AP1S3Q96PC3 154 aa7.68□□□□□ -1.18
SFXN3-207ENST00000489434 VAX2Q9UIW0 290 aa7.68□□□□□ -1.18
SFXN3-207ENST00000489434 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.67□□□□□ -1.18
SFXN3-207ENST00000489434 H7C1H1 209 aa7.67□□□□□ -1.18
SFXN3-207ENST00000489434 SSTP61278 116 aa7.67□□□□□ -1.18
SFXN3-207ENST00000489434 DAZAP1Q96EP5 407 aaKnown RBP7.67□□□□□ -1.18
SFXN3-207ENST00000489434 SSBP4Q9BWG4 385 aaPredicted RBP7.67□□□□□ -1.18
SFXN3-207ENST00000489434 AP5S1Q9NUS5 200 aa7.67□□□□□ -1.18
SFXN3-207ENST00000489434 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.67□□□□□ -1.18
SFXN3-207ENST00000489434 IGHV1-24A0A0C4DH33 117 aa7.66□□□□□ -1.18
SFXN3-207ENST00000489434 MUC21A0A0G2JKD1 596 aa7.66□□□□□ -1.18
SFXN3-207ENST00000489434 MUC21A0A140T8X8 626 aa7.66□□□□□ -1.18
SFXN3-207ENST00000489434 hDV102S1A0JD36 115 aa7.66□□□□□ -1.18
SFXN3-207ENST00000489434 ARPC5O15511 151 aa7.66□□□□□ -1.18
SFXN3-207ENST00000489434 SNAI2O43623 268 aa7.66□□□□□ -1.18
SFXN3-207ENST00000489434 SDIM1Q6ZPB5 146 aa7.66□□□□□ -1.18
SFXN3-207ENST00000489434 NTM-AS1Q6ZSK4 140 aa7.66□□□□□ -1.18
SFXN3-207ENST00000489434 SFT2D1Q8WV19 159 aa7.66□□□□□ -1.18
SFXN3-207ENST00000489434 IGHV3-64A0A075B6Q5 118 aa7.65□□□□□ -1.18
SFXN3-207ENST00000489434 TRAV8-4A0A0B4J246 113 aa7.65□□□□□ -1.18
SFXN3-207ENST00000489434 UMAD1C9J7I0 102 aa7.65□□□□□ -1.18
SFXN3-207ENST00000489434 TEX46H3BTG2 121 aa7.65□□□□□ -1.18
SFXN3-207ENST00000489434 P01737 135 aa7.65□□□□□ -1.18
SFXN3-207ENST00000489434 H2AFB1P0C5Y9 115 aa7.65□□□□□ -1.18
SFXN3-207ENST00000489434 HNRNPA3P51991 378 aaKnown RBP7.65□□□□□ -1.18
SFXN3-207ENST00000489434 CNBPP62633 177 aaKnown RBP7.65□□□□□ -1.18
SFXN3-207ENST00000489434 REG3AQ06141 175 aa7.65□□□□□ -1.18
SFXN3-207ENST00000489434 IQCJQ1A5X6 159 aa7.65□□□□□ -1.18
SFXN3-207ENST00000489434 UQCC3Q6UW78 93 aa7.65□□□□□ -1.18
SFXN3-207ENST00000489434 Q6ZRU5 148 aa7.65□□□□□ -1.18
SFXN3-207ENST00000489434 RNF185Q96GF1 192 aa7.65□□□□□ -1.18
SFXN3-207ENST00000489434 IGLV10-54A0A075B6I4 117 aa7.64□□□□□ -1.19
SFXN3-207ENST00000489434 SCO2A0A1W2PP80 73 aa7.64□□□□□ -1.19
SFXN3-207ENST00000489434 KRTAP26-1Q6PEX3 210 aa7.64□□□□□ -1.19
SFXN3-207ENST00000489434 FAM213BQ8TBF2 198 aa7.64□□□□□ -1.19
SFXN3-207ENST00000489434 MLST8Q9BVC4 326 aa7.64□□□□□ -1.19
SFXN3-207ENST00000489434 DPH3P1Q9H4G8 78 aa7.64□□□□□ -1.19
SFXN3-207ENST00000489434 CYTL1Q9NRR1 136 aa7.64□□□□□ -1.19
SFXN3-207ENST00000489434 A0A1B0GV50 99 aa7.63□□□□□ -1.19
SFXN3-207ENST00000489434 MGPP08493 103 aa7.63□□□□□ -1.19
SFXN3-207ENST00000489434 GZMBP10144 247 aa7.63□□□□□ -1.19
SFXN3-207ENST00000489434 TMUB2Q71RG4 321 aa7.63□□□□□ -1.19
SFXN3-207ENST00000489434 MBD3L1Q8WWY6 194 aa7.63□□□□□ -1.19
SFXN3-207ENST00000489434 TMEM243Q9BU79 118 aa7.63□□□□□ -1.19
SFXN3-207ENST00000489434 TPPP3Q9BW30 176 aa7.63□□□□□ -1.19
SFXN3-207ENST00000489434 KIF25-AS1Q9Y6Z4 181 aa7.63□□□□□ -1.19
SFXN3-207ENST00000489434 A0A1B0GUV1 79 aa7.62□□□□□ -1.19
SFXN3-207ENST00000489434 RAB19A4D1S5 217 aa7.62□□□□□ -1.19
SFXN3-207ENST00000489434 G3V3Q6 166 aa7.62□□□□□ -1.19
SFXN3-207ENST00000489434 PANO1I0J062 215 aa7.62□□□□□ -1.19
SFXN3-207ENST00000489434 M0QY20 66 aa7.62□□□□□ -1.19
SFXN3-207ENST00000489434 UBE2L6O14933 153 aa7.62□□□□□ -1.19
SFXN3-207ENST00000489434 RPS20P60866 119 aaKnown RBP7.62□□□□□ -1.19
SFXN3-207ENST00000489434 CIRBPQ14011 172 aaKnown RBP7.62□□□□□ -1.19
SFXN3-207ENST00000489434 WDR73Q6P4I2 378 aa7.62□□□□□ -1.19
SFXN3-207ENST00000489434 KCNRGQ8N5I3 272 aa7.62□□□□□ -1.19
SFXN3-207ENST00000489434 XKRY2A2RUG3 117 aa7.61□□□□□ -1.19
SFXN3-207ENST00000489434 RPL35P42766 123 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms