RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 ARAP1Q96P48 1450 aa0.2□□□□□ -2.38
PTPN4-212ENST00000488896 IGF2RP11717 2491 aa0.2□□□□□ -2.38
PTPN4-212ENST00000488896 TRAV1-2A0A0B4J238 106 aa0.19□□□□□ -2.38
PTPN4-212ENST00000488896 CTXND1A0A1B0GTU2 59 aa0.19□□□□□ -2.38
PTPN4-212ENST00000488896 APOC4-APOC2K7ER74 178 aa0.19□□□□□ -2.38
PTPN4-212ENST00000488896 PPP1R17O96001 155 aa0.19□□□□□ -2.38
PTPN4-212ENST00000488896 UBE2D1P51668 147 aa0.19□□□□□ -2.38
PTPN4-212ENST00000488896 INSL4Q14641 139 aa0.19□□□□□ -2.38
PTPN4-212ENST00000488896 MEIG1Q5JSS6 88 aa0.19□□□□□ -2.38
PTPN4-212ENST00000488896 ARL11Q969Q4 196 aa0.19□□□□□ -2.38
PTPN4-212ENST00000488896 AQP10Q96PS8 301 aa0.19□□□□□ -2.38
PTPN4-212ENST00000488896 SDF2Q99470 211 aa0.19□□□□□ -2.38
PTPN4-212ENST00000488896 SCN3BQ9NY72 215 aa0.19□□□□□ -2.38
PTPN4-212ENST00000488896 F8P00451 2351 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 ARFGEF1Q9Y6D6 1849 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 PTPRMP28827 1452 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 TRBV10-3A0A0K0K1G6 114 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 HCG22E2RYF7 251 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 SELENOWP63302 87 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 SPAG11BQ08648 103 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 SPAG11AQ6PDA7 123 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 ZNF818PQ6ZRF7 136 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 TTC9CQ8N5M4 171 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 WFDC6Q9BQY6 131 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 AGPAT4-IT1Q9H0P7 198 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 R4GMQ9 66 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 FHAD1B1AJZ9 1412 aa0.18□□□□□ -2.38
PTPN4-212ENST00000488896 VIRMAQ69YN4 1812 aaKnown RBP0.17□□□□□ -2.38
PTPN4-212ENST00000488896 AKAP11Q9UKA4 1901 aa0.17□□□□□ -2.38
PTPN4-212ENST00000488896 CACNA1HO95180 2353 aa0.17□□□□□ -2.38
PTPN4-212ENST00000488896 TRAV13-2A0A0B4J235 113 aa0.17□□□□□ -2.38
PTPN4-212ENST00000488896 A0A0D9SFI3 127 aa0.17□□□□□ -2.38
PTPN4-212ENST00000488896 CCL8P80075 99 aa0.17□□□□□ -2.38
PTPN4-212ENST00000488896 HAMPP81172 84 aa0.17□□□□□ -2.38
PTPN4-212ENST00000488896 CFAP126Q5VTH2 177 aa0.17□□□□□ -2.38
PTPN4-212ENST00000488896 PAIP2BQ9ULR5 123 aaKnown RBP0.17□□□□□ -2.38
PTPN4-212ENST00000488896 UNC13AQ9UPW8 1703 aa0.17□□□□□ -2.38
PTPN4-212ENST00000488896 U3KQA8 63 aa0.17□□□□□ -2.38
PTPN4-212ENST00000488896 MYH9P35579 1960 aaKnown RBP0.17□□□□□ -2.38
PTPN4-212ENST00000488896 PARP14Q460N5 1801 aa0.17□□□□□ -2.38
PTPN4-212ENST00000488896 PHIPQ8WWQ0 1821 aa0.17□□□□□ -2.38
PTPN4-212ENST00000488896 KCPQ6ZWJ8 1503 aa0.17□□□□□ -2.38
PTPN4-212ENST00000488896 PLXNA1Q9UIW2 1896 aa0.16□□□□□ -2.38
PTPN4-212ENST00000488896 NRXN2Q9P2S2 1712 aa0.16□□□□□ -2.38
PTPN4-212ENST00000488896 PI4KAP42356 2102 aa0.16□□□□□ -2.38
PTPN4-212ENST00000488896 PRG4Q92954 1404 aaPredicted RBP0.16□□□□□ -2.38
PTPN4-212ENST00000488896 MAST4O15021 2626 aa0.16□□□□□ -2.38
PTPN4-212ENST00000488896 M0R135 149 aa0.16□□□□□ -2.38
PTPN4-212ENST00000488896 NDUFA2O43678 99 aa0.16□□□□□ -2.38
PTPN4-212ENST00000488896 SNAPC5O75971 98 aa0.16□□□□□ -2.38
PTPN4-212ENST00000488896 SIX6O95475 246 aa0.16□□□□□ -2.38
PTPN4-212ENST00000488896 S100A3P33764 101 aa0.16□□□□□ -2.38
PTPN4-212ENST00000488896 LINC00470Q9BZP3 86 aa0.16□□□□□ -2.38
PTPN4-212ENST00000488896 CDK13Q14004 1512 aaKnown RBP0.16□□□□□ -2.38
PTPN4-212ENST00000488896 TMEM2Q9UHN6 1383 aa0.16□□□□□ -2.38
PTPN4-212ENST00000488896 TNS1Q9HBL0 1735 aaKnown RBP0.16□□□□□ -2.38
PTPN4-212ENST00000488896 TTC28Q96AY4 2481 aa0.15□□□□□ -2.38
PTPN4-212ENST00000488896 FAT4Q6V0I7 4981 aa0.15□□□□□ -2.38
PTPN4-212ENST00000488896 MYH8P13535 1937 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 MUC22E2RYF6 1773 aaPredicted RBP0.15□□□□□ -2.39
PTPN4-212ENST00000488896 CLPSL1A2RUU4 121 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 MIF4GDA9UHW6 222 aaKnown RBP0.15□□□□□ -2.39
PTPN4-212ENST00000488896 IFNGP01579 166 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 HMGN1P05114 100 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 SPINK8P0C7L1 97 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 S100A12P80511 92 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 CATR1Q13166 79 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 TMEM170BQ5T4T1 132 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 PRO0255Q9UI72 69 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 SERP1Q9Y6X1 66 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 WDR97A6NE52 1622 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 MEGF8Q7Z7M0 2845 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 SPEF2Q9C093 1822 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 JMJD1CQ15652 2540 aa0.15□□□□□ -2.39
PTPN4-212ENST00000488896 ASXL3Q9C0F0 2248 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 ZMYM4Q5VZL5 1548 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 FXYD6-FXYD2A0A087WZ82 144 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 TRAV22A0A0B4J277 110 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 G3V318 75 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 PIN1P1O15428 100 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 APOC2P02655 101 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 AKAIN1P0CW23 69 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 Q56UQ5 140 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 TSLPQ969D9 159 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 LSM10Q969L4 123 aaKnown RBP0.14□□□□□ -2.39
PTPN4-212ENST00000488896 PPP3R2Q96LZ3 170 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 RERGLQ9H628 205 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 NAA60Q9H7X0 242 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 V9GYH0 126 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 ZNF518AQ6AHZ1 1483 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 SSC5DA1L4H1 1573 aa0.14□□□□□ -2.39
PTPN4-212ENST00000488896 DAPK1P53355 1430 aa0.13□□□□□ -2.39
PTPN4-212ENST00000488896 KDM6BO15054 1643 aa0.13□□□□□ -2.39
PTPN4-212ENST00000488896 CEP152O94986 1710 aa0.13□□□□□ -2.39
PTPN4-212ENST00000488896 PLCE1Q9P212 2302 aa0.13□□□□□ -2.39
PTPN4-212ENST00000488896 SYNE1Q8NF91 8797 aaKnown RBP0.13□□□□□ -2.39
PTPN4-212ENST00000488896 M0R3E3 92 aa0.13□□□□□ -2.39
PTPN4-212ENST00000488896 C12orf73Q69YU5 71 aa0.13□□□□□ -2.39
PTPN4-212ENST00000488896 Q8N8P6 123 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms