RNA–Protein interactions for RNA: ENST00000488575.1

HLA-DPB1-216, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 421 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-216ENST00000488575 P01737 135 aa8.11□□□□□ -1.11
HLA-DPB1-216ENST00000488575 CXCL1P09341 107 aa8.11□□□□□ -1.11
HLA-DPB1-216ENST00000488575 ODF1Q14990 250 aa8.11□□□□□ -1.11
HLA-DPB1-216ENST00000488575 ANXA2RQ3ZCQ2 193 aa8.11□□□□□ -1.11
HLA-DPB1-216ENST00000488575 C9orf47Q6ZRZ4 202 aa8.11□□□□□ -1.11
HLA-DPB1-216ENST00000488575 NUDT10Q8NFP7 164 aa8.11□□□□□ -1.11
HLA-DPB1-216ENST00000488575 NUDT11Q96G61 164 aa8.11□□□□□ -1.11
HLA-DPB1-216ENST00000488575 GFRA4Q9GZZ7 299 aa8.11□□□□□ -1.11
HLA-DPB1-216ENST00000488575 RNASE7Q9H1E1 156 aaKnown RBP8.11□□□□□ -1.11
HLA-DPB1-216ENST00000488575 FSIP2Q5CZC0 6907 aa8.1□□□□□ -1.11
HLA-DPB1-216ENST00000488575 TRAV12-3A0A0B4J271 114 aa8.1□□□□□ -1.11
HLA-DPB1-216ENST00000488575 TRBV7-9A0A0J9YWB2 115 aa8.1□□□□□ -1.11
HLA-DPB1-216ENST00000488575 RPS10P46783 165 aaKnown RBP8.1□□□□□ -1.11
HLA-DPB1-216ENST00000488575 TMEM78Q5T7P6 136 aa8.1□□□□□ -1.11
HLA-DPB1-216ENST00000488575 SH2D6Q7Z4S9 175 aa8.1□□□□□ -1.11
HLA-DPB1-216ENST00000488575 Q8N976 141 aa8.1□□□□□ -1.11
HLA-DPB1-216ENST00000488575 NHLRC2Q8NBF2 726 aa8.1□□□□□ -1.11
HLA-DPB1-216ENST00000488575 TSKUQ8WUA8 353 aa8.1□□□□□ -1.11
HLA-DPB1-216ENST00000488575 LINC00477Q96M19 166 aa8.1□□□□□ -1.11
HLA-DPB1-216ENST00000488575 ODF3Q96PU9 254 aa8.1□□□□□ -1.11
HLA-DPB1-216ENST00000488575 RPP21Q9H633 154 aaKnown RBP8.1□□□□□ -1.11
HLA-DPB1-216ENST00000488575 IGKV2-40A0A087WW87 121 aaPredicted RBP8.09□□□□□ -1.11
HLA-DPB1-216ENST00000488575 IGKV2D-40P01614 121 aaPredicted RBP8.09□□□□□ -1.11
HLA-DPB1-216ENST00000488575 ZNF138P52744 262 aa8.09□□□□□ -1.11
HLA-DPB1-216ENST00000488575 SMUG1Q53HV7 270 aa8.09□□□□□ -1.11
HLA-DPB1-216ENST00000488575 PRR27Q6MZM9 219 aa8.09□□□□□ -1.11
HLA-DPB1-216ENST00000488575 RASL11AQ6T310 242 aa8.09□□□□□ -1.11
HLA-DPB1-216ENST00000488575 SGK494Q96LW2 274 aa8.09□□□□□ -1.11
HLA-DPB1-216ENST00000488575 DPH3P1Q9H4G8 78 aa8.09□□□□□ -1.11
HLA-DPB1-216ENST00000488575 TRAV8-3A0A0A6YYJ7 113 aa8.08□□□□□ -1.12
HLA-DPB1-216ENST00000488575 TRGV4A0A0C4DH28 118 aa8.08□□□□□ -1.12
HLA-DPB1-216ENST00000488575 XKRY2A2RUG3 117 aa8.08□□□□□ -1.12
HLA-DPB1-216ENST00000488575 FAM162BQ5T6X4 162 aa8.08□□□□□ -1.12
HLA-DPB1-216ENST00000488575 Q6AWC8 147 aa8.08□□□□□ -1.12
HLA-DPB1-216ENST00000488575 WDR73Q6P4I2 378 aa8.08□□□□□ -1.12
HLA-DPB1-216ENST00000488575 ZC2HC1AQ96GY0 325 aa8.08□□□□□ -1.12
HLA-DPB1-216ENST00000488575 NAT8BQ9UHF3 227 aa8.08□□□□□ -1.12
HLA-DPB1-216ENST00000488575 COX11Q9Y6N1 276 aa8.08□□□□□ -1.12
HLA-DPB1-216ENST00000488575 TRAV8-6A0A0B4J262 113 aa8.07□□□□□ -1.12
HLA-DPB1-216ENST00000488575 MT-ND6P03923 174 aa8.07□□□□□ -1.12
HLA-DPB1-216ENST00000488575 LEPP41159 167 aa8.07□□□□□ -1.12
HLA-DPB1-216ENST00000488575 FOXA3P55318 350 aaPredicted RBP8.07□□□□□ -1.12
HLA-DPB1-216ENST00000488575 RPS20P60866 119 aaKnown RBP8.07□□□□□ -1.12
HLA-DPB1-216ENST00000488575 ATP5L2Q7Z4Y8 100 aa8.07□□□□□ -1.12
HLA-DPB1-216ENST00000488575 BAALCQ8WXS3 180 aa8.07□□□□□ -1.12
HLA-DPB1-216ENST00000488575 MRPL16Q9NX20 251 aaKnown RBP8.07□□□□□ -1.12
HLA-DPB1-216ENST00000488575 FABP5P3A8MUU1 101 aa8.06□□□□□ -1.12
HLA-DPB1-216ENST00000488575 PRAC2D3DTV9 90 aa8.06□□□□□ -1.12
HLA-DPB1-216ENST00000488575 J3KRW8 73 aa8.06□□□□□ -1.12
HLA-DPB1-216ENST00000488575 IGHV3-30P01768 117 aa8.06□□□□□ -1.12
HLA-DPB1-216ENST00000488575 IGHV3-33P01772 117 aa8.06□□□□□ -1.12
HLA-DPB1-216ENST00000488575 IGHV3-30-3P0DP02 117 aa8.06□□□□□ -1.12
HLA-DPB1-216ENST00000488575 IGHV3-30-5P0DP03 117 aa8.06□□□□□ -1.12
HLA-DPB1-216ENST00000488575 GNB1LQ9BYB4 327 aa8.06□□□□□ -1.12
HLA-DPB1-216ENST00000488575 AGPAT4-IT1Q9H0P7 198 aa8.06□□□□□ -1.12
HLA-DPB1-216ENST00000488575 A0A1B0GW15 77 aa8.05□□□□□ -1.12
HLA-DPB1-216ENST00000488575 OR2D3Q8NGH3 330 aa8.05□□□□□ -1.12
HLA-DPB1-216ENST00000488575 ATP6V0E2Q8NHE4 81 aa8.05□□□□□ -1.12
HLA-DPB1-216ENST00000488575 A0A0J9YXV3 536 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 C7orf71A4D174 169 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 HIGD1CA8MV81 97 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 PHOX2AO14813 284 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 SH2D1AO60880 128 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 TRGC2P03986 189 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 S100A6P06703 90 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 CRIP1P50238 77 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 ERCC8Q13216 396 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 OR10J3Q5JRS4 329 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 NUP35Q8NFH5 326 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 Q8TAT8 98 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 ZNF479Q96JC4 524 aa8.04□□□□□ -1.12
HLA-DPB1-216ENST00000488575 HLA-DQA1P01909 254 aa8.03□□□□□ -1.12
HLA-DPB1-216ENST00000488575 S100A8P05109 93 aa8.03□□□□□ -1.12
HLA-DPB1-216ENST00000488575 CRISP2P16562 243 aa8.03□□□□□ -1.12
HLA-DPB1-216ENST00000488575 KRTAP10-8P60410 259 aa8.03□□□□□ -1.12
HLA-DPB1-216ENST00000488575 LINC01559Q495D7 138 aa8.03□□□□□ -1.12
HLA-DPB1-216ENST00000488575 FAM19A4Q96LR4 140 aa8.03□□□□□ -1.12
HLA-DPB1-216ENST00000488575 TRAPPC1Q9Y5R8 145 aa8.03□□□□□ -1.12
HLA-DPB1-216ENST00000488575 KLLNB2CW77 178 aa8.02□□□□□ -1.13
HLA-DPB1-216ENST00000488575 BORCS7Q96B45 105 aa8.02□□□□□ -1.13
HLA-DPB1-216ENST00000488575 TRAV21A0A0B4J279 112 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 LOC105371267A0A1B0GV96 52 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 A0A1B0GXF2 115 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 HIST1H2BKO60814 126 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 HIST1H2BJP06899 126 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 HIST1H2BOP23527 126 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 HIST1H2BBP33778 126 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 HIST1H2BDP58876 126 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 HIST1H2BCP62807 126 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 HBBP68871 147 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 RIGQ13278 110 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 HIST2H2BEQ16778 126 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 GTSF1Q8WW33 167 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 HIST1H2BHQ93079 126 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 HIST1H2BNQ99877 126 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 HIST1H2BMQ99879 126 aa8.01□□□□□ -1.13
HLA-DPB1-216ENST00000488575 LOC100131303A0A0U1RQF7 123 aa8□□□□□ -1.13
HLA-DPB1-216ENST00000488575 A0A1B0GUT8 65 aa8□□□□□ -1.13
HLA-DPB1-216ENST00000488575 C5orf52A6NGY3 159 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms