RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 Q8N3U1 123 aa11.49□□□□□ -0.57
HMG20B-212ENST00000487894 A0A087WWC5 75 aa11.48□□□□□ -0.57
HMG20B-212ENST00000487894 F5H697 171 aa11.48□□□□□ -0.57
HMG20B-212ENST00000487894 FAM231DQ6ZW35 169 aa11.48□□□□□ -0.57
HMG20B-212ENST00000487894 LRP1BQ9NZR2 4599 aa11.48□□□□□ -0.57
HMG20B-212ENST00000487894 IBA57-AS1B1ANH7 110 aa11.47□□□□□ -0.57
HMG20B-212ENST00000487894 LINC01551Q86U37 167 aa11.47□□□□□ -0.57
HMG20B-212ENST00000487894 CNFNQ9BYD5 112 aa11.47□□□□□ -0.57
HMG20B-212ENST00000487894 ZNF727A8MUV8 499 aa11.46□□□□□ -0.57
HMG20B-212ENST00000487894 GATCO43716 136 aaKnown RBP11.46□□□□□ -0.57
HMG20B-212ENST00000487894 MGPP08493 103 aa11.46□□□□□ -0.57
HMG20B-212ENST00000487894 NTF3P20783 257 aa11.46□□□□□ -0.57
HMG20B-212ENST00000487894 WDR73Q6P4I2 378 aa11.46□□□□□ -0.57
HMG20B-212ENST00000487894 SPATA12Q7Z6I5 190 aa11.46□□□□□ -0.57
HMG20B-212ENST00000487894 GTSF1Q8WW33 167 aa11.46□□□□□ -0.57
HMG20B-212ENST00000487894 TRGC1P0CF51 173 aa11.45□□□□□ -0.58
HMG20B-212ENST00000487894 C9JQL5 133 aa11.44□□□□□ -0.58
HMG20B-212ENST00000487894 KRTAP10-2P60368 255 aa11.44□□□□□ -0.58
HMG20B-212ENST00000487894 ERVFC1-1P60608 527 aa11.44□□□□□ -0.58
HMG20B-212ENST00000487894 SRSF3P84103 164 aaKnown RBP11.44□□□□□ -0.58
HMG20B-212ENST00000487894 LAGE3Q14657 143 aa11.44□□□□□ -0.58
HMG20B-212ENST00000487894 CT83Q5H943 113 aa11.44□□□□□ -0.58
HMG20B-212ENST00000487894 SUMO4Q6EEV6 95 aa11.44□□□□□ -0.58
HMG20B-212ENST00000487894 DPH3P1Q9H4G8 78 aa11.44□□□□□ -0.58
HMG20B-212ENST00000487894 RYR1P21817 5038 aa11.44□□□□□ -0.58
HMG20B-212ENST00000487894 C16orf90A8MZG2 172 aa11.43□□□□□ -0.58
HMG20B-212ENST00000487894 M0QY20 66 aa11.43□□□□□ -0.58
HMG20B-212ENST00000487894 NIT1Q86X76 327 aa11.43□□□□□ -0.58
HMG20B-212ENST00000487894 Q9HAA7 133 aa11.43□□□□□ -0.58
HMG20B-212ENST00000487894 A8MWL6 223 aa11.42□□□□□ -0.58
HMG20B-212ENST00000487894 TWIST1Q15672 202 aa11.42□□□□□ -0.58
HMG20B-212ENST00000487894 DAZ4Q86SG3 579 aaKnown RBP11.42□□□□□ -0.58
HMG20B-212ENST00000487894 DAZ3Q9NR90 486 aaKnown RBP11.42□□□□□ -0.58
HMG20B-212ENST00000487894 A0A087WTM6 91 aa11.41□□□□□ -0.58
HMG20B-212ENST00000487894 TRBV6-8A0A0A6YYG3 113 aa11.41□□□□□ -0.58
HMG20B-212ENST00000487894 H7C1H1 209 aa11.41□□□□□ -0.58
HMG20B-212ENST00000487894 FAM74A3Q4VXF1 159 aa11.41□□□□□ -0.58
HMG20B-212ENST00000487894 OSTCQ9NRP0 149 aa11.41□□□□□ -0.58
HMG20B-212ENST00000487894 PEA15Q15121 130 aa11.4□□□□□ -0.58
HMG20B-212ENST00000487894 PGLYRP4Q96LB8 373 aa11.4□□□□□ -0.58
HMG20B-212ENST00000487894 DNAJC30Q96LL9 226 aa11.4□□□□□ -0.58
HMG20B-212ENST00000487894 APOBP04114 4563 aaKnown RBP11.4□□□□□ -0.58
HMG20B-212ENST00000487894 EIF4EBP3O60516 100 aaPredicted RBP11.39□□□□□ -0.59
HMG20B-212ENST00000487894 FOXA3P55318 350 aaPredicted RBP11.39□□□□□ -0.59
HMG20B-212ENST00000487894 RPL23P62829 140 aaKnown RBP11.39□□□□□ -0.59
HMG20B-212ENST00000487894 TMEM241Q24JQ0 296 aa11.39□□□□□ -0.59
HMG20B-212ENST00000487894 RASL11AQ6T310 242 aa11.39□□□□□ -0.59
HMG20B-212ENST00000487894 NTM-AS1Q6ZSK4 140 aa11.39□□□□□ -0.59
HMG20B-212ENST00000487894 TSKUQ8WUA8 353 aa11.39□□□□□ -0.59
HMG20B-212ENST00000487894 ISOC2Q96AB3 205 aa11.39□□□□□ -0.59
HMG20B-212ENST00000487894 CHCHD7Q9BUK0 85 aa11.39□□□□□ -0.59
HMG20B-212ENST00000487894 SMDT1Q9H4I9 107 aa11.39□□□□□ -0.59
HMG20B-212ENST00000487894 URGCP-MRPS24S4R325 110 aa11.39□□□□□ -0.59
HMG20B-212ENST00000487894 HSPG2P98160 4391 aa11.38□□□□□ -0.59
HMG20B-212ENST00000487894 PSCAO43653 123 aa11.38□□□□□ -0.59
HMG20B-212ENST00000487894 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.38□□□□□ -0.59
HMG20B-212ENST00000487894 GFRA4Q9GZZ7 299 aa11.38□□□□□ -0.59
HMG20B-212ENST00000487894 NAT8Q9UHE5 227 aa11.38□□□□□ -0.59
HMG20B-212ENST00000487894 V9GYV3 84 aa11.38□□□□□ -0.59
HMG20B-212ENST00000487894 A0A087WX48 190 aa11.37□□□□□ -0.59
HMG20B-212ENST00000487894 LRCOL1A6NCL2 159 aa11.37□□□□□ -0.59
HMG20B-212ENST00000487894 ADIRFQ15847 76 aa11.37□□□□□ -0.59
HMG20B-212ENST00000487894 TMEM97Q5BJF2 176 aa11.37□□□□□ -0.59
HMG20B-212ENST00000487894 SVIPQ8NHG7 77 aa11.37□□□□□ -0.59
HMG20B-212ENST00000487894 TRAV8-3A0A0A6YYJ7 113 aa11.36□□□□□ -0.59
HMG20B-212ENST00000487894 FAM231BA6NCW3 169 aa11.36□□□□□ -0.59
HMG20B-212ENST00000487894 HIGD1CA8MV81 97 aa11.36□□□□□ -0.59
HMG20B-212ENST00000487894 FUSP35637 526 aaKnown RBP eCLIP11.36□□□□□ -0.59
HMG20B-212ENST00000487894 C15orf54Q8N8G6 183 aa11.36□□□□□ -0.59
HMG20B-212ENST00000487894 GATD1Q8NB37 220 aa11.36□□□□□ -0.59
HMG20B-212ENST00000487894 NIT2Q9NQR4 276 aa11.36□□□□□ -0.59
HMG20B-212ENST00000487894 KLK12Q9UKR0 248 aa11.36□□□□□ -0.59
HMG20B-212ENST00000487894 TRAV26-2A0A0B4J265 109 aa11.35□□□□□ -0.59
HMG20B-212ENST00000487894 MPV17L2Q567V2 206 aa11.35□□□□□ -0.59
HMG20B-212ENST00000487894 SMIM15Q7Z3B0 74 aa11.35□□□□□ -0.59
HMG20B-212ENST00000487894 BORCS7Q96B45 105 aa11.35□□□□□ -0.59
HMG20B-212ENST00000487894 CHCHD5Q9BSY4 110 aa11.35□□□□□ -0.59
HMG20B-212ENST00000487894 TRBV25-1A0A075B6N4 114 aa11.34□□□□□ -0.59
HMG20B-212ENST00000487894 IQCJQ1A5X6 159 aa11.34□□□□□ -0.59
HMG20B-212ENST00000487894 CDPF1Q6NVV7 123 aa11.34□□□□□ -0.59
HMG20B-212ENST00000487894 KCNIP4Q6PIL6 250 aa11.34□□□□□ -0.59
HMG20B-212ENST00000487894 TM2D2Q9BX73 214 aa11.34□□□□□ -0.59
HMG20B-212ENST00000487894 A0A1B0GUT8 65 aa11.33□□□□□ -0.6
HMG20B-212ENST00000487894 TMEM262E9PQX1 116 aa11.33□□□□□ -0.6
HMG20B-212ENST00000487894 ELOBQ15370 118 aa11.33□□□□□ -0.6
HMG20B-212ENST00000487894 FRZBQ92765 325 aa11.33□□□□□ -0.6
HMG20B-212ENST00000487894 IGHV1-24A0A0C4DH33 117 aa11.32□□□□□ -0.6
HMG20B-212ENST00000487894 SMCPP49901 116 aaPredicted RBP11.32□□□□□ -0.6
HMG20B-212ENST00000487894 PKIAP61925 76 aa11.32□□□□□ -0.6
HMG20B-212ENST00000487894 NUP35Q8NFH5 326 aa11.32□□□□□ -0.6
HMG20B-212ENST00000487894 UBE2WQ96B02 151 aa11.32□□□□□ -0.6
HMG20B-212ENST00000487894 RPL39LQ96EH5 51 aaKnown RBP11.32□□□□□ -0.6
HMG20B-212ENST00000487894 CDK2AP2O75956 126 aa11.31□□□□□ -0.6
HMG20B-212ENST00000487894 GAGE6Q13070 117 aa11.31□□□□□ -0.6
HMG20B-212ENST00000487894 WFDC2Q14508 124 aa11.31□□□□□ -0.6
HMG20B-212ENST00000487894 ATRAIDQ6UW56 229 aa11.31□□□□□ -0.6
HMG20B-212ENST00000487894 MAPKAPK5-AS1Q8N8E1 139 aa11.31□□□□□ -0.6
HMG20B-212ENST00000487894 Q8N976 141 aa11.31□□□□□ -0.6
HMG20B-212ENST00000487894 TMEM191AQ9H0A3 160 aa11.31□□□□□ -0.6
HMG20B-212ENST00000487894 RAB14P61106 215 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms