RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 GNG13Q9P2W3 67 aa16.08■□□□□ 0.16
LIME1-206ENST00000487026 EIF5AP63241 154 aaKnown RBP16.07■□□□□ 0.16
LIME1-206ENST00000487026 MPV17L2Q567V2 206 aa16.07■□□□□ 0.16
LIME1-206ENST00000487026 ATRAIDQ6UW56 229 aa16.07■□□□□ 0.16
LIME1-206ENST00000487026 LINC00528Q8N1L1 170 aa16.07■□□□□ 0.16
LIME1-206ENST00000487026 C15orf54Q8N8G6 183 aa16.07■□□□□ 0.16
LIME1-206ENST00000487026 GZMBP10144 247 aa16.06■□□□□ 0.16
LIME1-206ENST00000487026 Q0VG73 95 aa16.06■□□□□ 0.16
LIME1-206ENST00000487026 CHCHD5Q9BSY4 110 aa16.06■□□□□ 0.16
LIME1-206ENST00000487026 KIF25-AS1Q9Y6Z4 181 aa16.06■□□□□ 0.16
LIME1-206ENST00000487026 NTM-AS1Q6ZSK4 140 aa16.04■□□□□ 0.16
LIME1-206ENST00000487026 C1orf43Q9BWL3 253 aa16.04■□□□□ 0.16
LIME1-206ENST00000487026 MANBALQ9NQG1 85 aa16.04■□□□□ 0.16
LIME1-206ENST00000487026 ANGP03950 147 aaKnown RBP16.03■□□□□ 0.16
LIME1-206ENST00000487026 PLA2G1BP04054 148 aaKnown RBP16.03■□□□□ 0.16
LIME1-206ENST00000487026 SMIM17P0DL12 118 aa16.03■□□□□ 0.16
LIME1-206ENST00000487026 SCXQ7RTU7 201 aa16.03■□□□□ 0.16
LIME1-206ENST00000487026 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.03■□□□□ 0.16
LIME1-206ENST00000487026 C11orf52Q96A22 123 aa16.03■□□□□ 0.16
LIME1-206ENST00000487026 TPPP3Q9BW30 176 aa16.03■□□□□ 0.16
LIME1-206ENST00000487026 IGLV2-8P01709 118 aa16.02■□□□□ 0.16
LIME1-206ENST00000487026 CRPP02741 224 aa16.02■□□□□ 0.16
LIME1-206ENST00000487026 CENPWQ5EE01 88 aa16.02■□□□□ 0.16
LIME1-206ENST00000487026 RAB19A4D1S5 217 aa16.01■□□□□ 0.15
LIME1-206ENST00000487026 AP1S3Q96PC3 154 aa16.01■□□□□ 0.15
LIME1-206ENST00000487026 TRAV1-1A0A0B4J248 108 aa16■□□□□ 0.15
LIME1-206ENST00000487026 GAGE6Q13070 117 aa16■□□□□ 0.15
LIME1-206ENST00000487026 DAZAP1Q96EP5 407 aaKnown RBP16■□□□□ 0.15
LIME1-206ENST00000487026 VAX2Q9UIW0 290 aa16■□□□□ 0.15
LIME1-206ENST00000487026 MGPP08493 103 aa15.99■□□□□ 0.15
LIME1-206ENST00000487026 OR2D3Q8NGH3 330 aa15.99■□□□□ 0.15
LIME1-206ENST00000487026 CHAC1Q9BUX1 264 aa15.99■□□□□ 0.15
LIME1-206ENST00000487026 IGLC6P0CF74 106 aa15.98■□□□□ 0.15
LIME1-206ENST00000487026 CLPSL2Q6UWE3 100 aa15.98■□□□□ 0.15
LIME1-206ENST00000487026 FER1L6-AS1Q8NA97 138 aa15.98■□□□□ 0.15
LIME1-206ENST00000487026 J3QL48 77 aa15.97■□□□□ 0.15
LIME1-206ENST00000487026 HLA-DQA1P01909 254 aa15.97■□□□□ 0.15
LIME1-206ENST00000487026 RBX1P62877 108 aa15.97■□□□□ 0.15
LIME1-206ENST00000487026 TMEM97Q5BJF2 176 aa15.97■□□□□ 0.15
LIME1-206ENST00000487026 C19orf71A6NCJ1 209 aa15.96■□□□□ 0.15
LIME1-206ENST00000487026 USP17L23D6RBM5 183 aa15.96■□□□□ 0.15
LIME1-206ENST00000487026 M0QY20 66 aa15.96■□□□□ 0.15
LIME1-206ENST00000487026 GNG4P50150 75 aa15.96■□□□□ 0.15
LIME1-206ENST00000487026 RAB5CP51148 216 aa15.96■□□□□ 0.15
LIME1-206ENST00000487026 C14orf177Q52M58 125 aa15.96■□□□□ 0.15
LIME1-206ENST00000487026 EIF5AL1Q6IS14 154 aaKnown RBP15.96■□□□□ 0.15
LIME1-206ENST00000487026 CIRBP-AS1Q8TBR5 109 aa15.96■□□□□ 0.15
LIME1-206ENST00000487026 SULT1A2P50226 295 aa15.95■□□□□ 0.14
LIME1-206ENST00000487026 RPS20P60866 119 aaKnown RBP15.95■□□□□ 0.14
LIME1-206ENST00000487026 PKIAP61925 76 aa15.95■□□□□ 0.14
LIME1-206ENST00000487026 MIAQ16674 131 aa15.95■□□□□ 0.14
LIME1-206ENST00000487026 LINC00269Q8N2A0 174 aa15.95■□□□□ 0.14
LIME1-206ENST00000487026 TRBV25-1A0A075B6N4 114 aa15.94■□□□□ 0.14
LIME1-206ENST00000487026 TEX46H3BTG2 121 aa15.94■□□□□ 0.14
LIME1-206ENST00000487026 SUMO4Q6EEV6 95 aa15.94■□□□□ 0.14
LIME1-206ENST00000487026 SLC51BQ86UW2 128 aa15.94■□□□□ 0.14
LIME1-206ENST00000487026 MED9Q9NWA0 146 aa15.94■□□□□ 0.14
LIME1-206ENST00000487026 MEF2BQ02080 365 aaPredicted RBP15.93■□□□□ 0.14
LIME1-206ENST00000487026 C9orf62Q8N4C0 152 aa15.93■□□□□ 0.14
LIME1-206ENST00000487026 PRR34Q9NV39 138 aa15.93■□□□□ 0.14
LIME1-206ENST00000487026 TRBV20OR9-2A0A075B6H5 130 aa15.92■□□□□ 0.14
LIME1-206ENST00000487026 P01737 135 aa15.92■□□□□ 0.14
LIME1-206ENST00000487026 PRSS1P07477 247 aa15.92■□□□□ 0.14
LIME1-206ENST00000487026 CACNG7P62955 275 aa15.92■□□□□ 0.14
LIME1-206ENST00000487026 LYZL1Q6UWQ5 148 aa15.92■□□□□ 0.14
LIME1-206ENST00000487026 DEFB104AQ8WTQ1 72 aa15.92■□□□□ 0.14
LIME1-206ENST00000487026 IGHV1-24A0A0C4DH33 117 aa15.91■□□□□ 0.14
LIME1-206ENST00000487026 PDE6DO43924 150 aa15.91■□□□□ 0.14
LIME1-206ENST00000487026 NKX2-5P52952 324 aaPredicted RBP15.91■□□□□ 0.14
LIME1-206ENST00000487026 IQCJQ1A5X6 159 aa15.91■□□□□ 0.14
LIME1-206ENST00000487026 KRTAP26-1Q6PEX3 210 aa15.91■□□□□ 0.14
LIME1-206ENST00000487026 H7C1H1 209 aa15.9■□□□□ 0.14
LIME1-206ENST00000487026 IFNA1P01562 189 aa15.9■□□□□ 0.14
LIME1-206ENST00000487026 KRTAP10-4P60372 401 aaPredicted RBP15.89■□□□□ 0.13
LIME1-206ENST00000487026 SMIM12Q96EX1 92 aa15.89■□□□□ 0.13
LIME1-206ENST00000487026 IGLV10-54A0A075B6I4 117 aa15.88■□□□□ 0.13
LIME1-206ENST00000487026 XKRY2A2RUG3 117 aa15.88■□□□□ 0.13
LIME1-206ENST00000487026 F2Z2F3 143 aa15.88■□□□□ 0.13
LIME1-206ENST00000487026 BCL2P10415 239 aa15.88■□□□□ 0.13
LIME1-206ENST00000487026 NTF3P20783 257 aa15.88■□□□□ 0.13
LIME1-206ENST00000487026 RASL11AQ6T310 242 aa15.88■□□□□ 0.13
LIME1-206ENST00000487026 NUDT10Q8NFP7 164 aa15.87■□□□□ 0.13
LIME1-206ENST00000487026 NUDT11Q96G61 164 aa15.87■□□□□ 0.13
LIME1-206ENST00000487026 LRP1Q07954 4544 aaKnown RBP15.86■□□□□ 0.13
LIME1-206ENST00000487026 KRTAP29-1A8MX34 341 aaPredicted RBP15.86■□□□□ 0.13
LIME1-206ENST00000487026 TRGC1P0CF51 173 aa15.86■□□□□ 0.13
LIME1-206ENST00000487026 REG3AQ06141 175 aa15.86■□□□□ 0.13
LIME1-206ENST00000487026 C20orf203Q8NBC4 194 aa15.85■□□□□ 0.13
LIME1-206ENST00000487026 DPH3P1Q9H4G8 78 aa15.85■□□□□ 0.13
LIME1-206ENST00000487026 NIT2Q9NQR4 276 aa15.85■□□□□ 0.13
LIME1-206ENST00000487026 BIN3Q9NQY0 253 aa15.85■□□□□ 0.13
LIME1-206ENST00000487026 IGLV4-60A0A075B6I1 120 aa15.84■□□□□ 0.13
LIME1-206ENST00000487026 DGAT2L7PQ6IED9 249 aa15.84■□□□□ 0.13
LIME1-206ENST00000487026 TMEM243Q9BU79 118 aa15.84■□□□□ 0.13
LIME1-206ENST00000487026 GFRA4Q9GZZ7 299 aa15.84■□□□□ 0.13
LIME1-206ENST00000487026 C9orf163Q8N9P6 203 aa15.83■□□□□ 0.12
LIME1-206ENST00000487026 RNASE7Q9H1E1 156 aaKnown RBP15.83■□□□□ 0.12
LIME1-206ENST00000487026 TWIST1Q15672 202 aa15.82■□□□□ 0.12
LIME1-206ENST00000487026 K7EN84 100 aa15.81■□□□□ 0.12
LIME1-206ENST00000487026 CTRLP40313 264 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 950.9 ms