RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 IFNA17P01571 189 aa-0.04□□□□□ -2.42
GCFC2-209ENST00000486016 PIPP12273 146 aaPredicted RBP-0.04□□□□□ -2.42
GCFC2-209ENST00000486016 RPS25P62851 125 aaKnown RBP-0.04□□□□□ -2.42
GCFC2-209ENST00000486016 SPTSSBQ8NFR3 76 aa-0.04□□□□□ -2.42
GCFC2-209ENST00000486016 WFDC6Q9BQY6 131 aa-0.04□□□□□ -2.42
GCFC2-209ENST00000486016 TPT1P8Q9HAU6 139 aa-0.04□□□□□ -2.42
GCFC2-209ENST00000486016 GOLGA3Q08378 1498 aa-0.04□□□□□ -2.42
GCFC2-209ENST00000486016 DAPK1P53355 1430 aa-0.04□□□□□ -2.42
GCFC2-209ENST00000486016 DMBT1Q9UGM3 2413 aaPredicted RBP-0.05□□□□□ -2.42
GCFC2-209ENST00000486016 IGSF10Q6WRI0 2623 aa-0.05□□□□□ -2.42
GCFC2-209ENST00000486016 PARP14Q460N5 1801 aa-0.05□□□□□ -2.42
GCFC2-209ENST00000486016 TRAV1-2A0A0B4J238 106 aa-0.05□□□□□ -2.42
GCFC2-209ENST00000486016 G3V318 75 aa-0.05□□□□□ -2.42
GCFC2-209ENST00000486016 CBLN1P23435 193 aa-0.05□□□□□ -2.42
GCFC2-209ENST00000486016 COPZ1P61923 177 aa-0.05□□□□□ -2.42
GCFC2-209ENST00000486016 S100A7L2Q5SY68 101 aa-0.05□□□□□ -2.42
GCFC2-209ENST00000486016 SPTSSAQ969W0 71 aa-0.05□□□□□ -2.42
GCFC2-209ENST00000486016 U3KQA8 63 aa-0.05□□□□□ -2.42
GCFC2-209ENST00000486016 ASXL3Q9C0F0 2248 aa-0.05□□□□□ -2.42
GCFC2-209ENST00000486016 ARFGEF1Q9Y6D6 1849 aa-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 CELSR2Q9HCU4 2923 aa-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 CACNA1CQ13936 2221 aa-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 ZMYM4Q5VZL5 1548 aa-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 APOC4-APOC2K7ER74 178 aa-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 SNCGO76070 127 aa-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 NDUFB6O95139 128 aa-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 GUCA1AP43080 201 aaPredicted RBP-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 ZNF818PQ6ZRF7 136 aa-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 SSBP3-AS1Q7Z2R9 100 aa-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 UBE2DNLQ8IWF7 75 aa-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 KCNRGQ8N5I3 272 aa-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 SDF2Q99470 211 aa-0.06□□□□□ -2.42
GCFC2-209ENST00000486016 SMCO1Q147U7 214 aa-0.07□□□□□ -2.42
GCFC2-209ENST00000486016 SIPA1L3O60292 1781 aaPredicted RBP-0.07□□□□□ -2.42
GCFC2-209ENST00000486016 COL7A1Q02388 2944 aa-0.08□□□□□ -2.42
GCFC2-209ENST00000486016 AHCTF1Q8WYP5 2266 aa-0.08□□□□□ -2.42
GCFC2-209ENST00000486016 HIVEP3Q5T1R4 2406 aa-0.08□□□□□ -2.42
GCFC2-209ENST00000486016 ZNF815PA8K554 130 aa-0.08□□□□□ -2.42
GCFC2-209ENST00000486016 TCEAL4Q96EI5 215 aa-0.08□□□□□ -2.42
GCFC2-209ENST00000486016 TMEM191AQ9H0A3 160 aa-0.08□□□□□ -2.42
GCFC2-209ENST00000486016 LINC00312Q9Y6C7 94 aa-0.08□□□□□ -2.42
GCFC2-209ENST00000486016 TRBV10-3A0A0K0K1G6 114 aa-0.09□□□□□ -2.42
GCFC2-209ENST00000486016 FAM92AA1XBS5 289 aa-0.09□□□□□ -2.42
GCFC2-209ENST00000486016 CCL8P80075 99 aa-0.09□□□□□ -2.42
GCFC2-209ENST00000486016 Q5VV11 94 aa-0.09□□□□□ -2.42
GCFC2-209ENST00000486016 DPH3Q96FX2 82 aa-0.09□□□□□ -2.42
GCFC2-209ENST00000486016 PFDN5Q99471 154 aa-0.09□□□□□ -2.42
GCFC2-209ENST00000486016 SEC11CQ9BY50 192 aa-0.09□□□□□ -2.42
GCFC2-209ENST00000486016 CELSR1Q9NYQ6 3014 aa-0.1□□□□□ -2.42
GCFC2-209ENST00000486016 UNC79Q9P2D8 2635 aa-0.1□□□□□ -2.42
GCFC2-209ENST00000486016 MYOM3Q5VTT5 1437 aa-0.1□□□□□ -2.43
GCFC2-209ENST00000486016 CASKIN1Q8WXD9 1431 aa-0.1□□□□□ -2.43
GCFC2-209ENST00000486016 IFITM1P13164 125 aa-0.1□□□□□ -2.43
GCFC2-209ENST00000486016 BAGE3Q86Y29 109 aa-0.1□□□□□ -2.43
GCFC2-209ENST00000486016 CCDC167Q9P0B6 97 aa-0.1□□□□□ -2.43
GCFC2-209ENST00000486016 LRRC37A3O60309 1634 aa-0.1□□□□□ -2.43
GCFC2-209ENST00000486016 ZNF518AQ6AHZ1 1483 aa-0.1□□□□□ -2.43
GCFC2-209ENST00000486016 IFT140Q96RY7 1462 aa-0.1□□□□□ -2.43
GCFC2-209ENST00000486016 SMIM6P0DI80 62 aa-0.11□□□□□ -2.43
GCFC2-209ENST00000486016 CYP4F30PQ9H0H9 118 aa-0.11□□□□□ -2.43
GCFC2-209ENST00000486016 IFT172Q9UG01 1749 aa-0.11□□□□□ -2.43
GCFC2-209ENST00000486016 GRIN2AQ12879 1464 aa-0.11□□□□□ -2.43
GCFC2-209ENST00000486016 A0A0D9SFI3 127 aa-0.12□□□□□ -2.43
GCFC2-209ENST00000486016 PIN1P1O15428 100 aa-0.12□□□□□ -2.43
GCFC2-209ENST00000486016 SIX6O95475 246 aa-0.12□□□□□ -2.43
GCFC2-209ENST00000486016 SPINK8P0C7L1 97 aa-0.12□□□□□ -2.43
GCFC2-209ENST00000486016 HIST1H1DP16402 221 aaKnown RBP-0.12□□□□□ -2.43
GCFC2-209ENST00000486016 CCL18P55774 89 aa-0.12□□□□□ -2.43
GCFC2-209ENST00000486016 CFAP126Q5VTH2 177 aa-0.12□□□□□ -2.43
GCFC2-209ENST00000486016 PDCD10Q9BUL8 212 aa-0.12□□□□□ -2.43
GCFC2-209ENST00000486016 PAIP2BQ9ULR5 123 aaKnown RBP-0.12□□□□□ -2.43
GCFC2-209ENST00000486016 WNK2Q9Y3S1 2297 aa-0.12□□□□□ -2.43
GCFC2-209ENST00000486016 UBR5O95071 2799 aaPredicted RBP-0.13□□□□□ -2.43
GCFC2-209ENST00000486016 HCG22E2RYF7 251 aa-0.13□□□□□ -2.43
GCFC2-209ENST00000486016 CFDP00746 253 aaPredicted RBP-0.13□□□□□ -2.43
GCFC2-209ENST00000486016 ARPC4P59998 168 aa-0.13□□□□□ -2.43
GCFC2-209ENST00000486016 CNFNQ9BYD5 112 aa-0.13□□□□□ -2.43
GCFC2-209ENST00000486016 PRO0255Q9UI72 69 aa-0.13□□□□□ -2.43
GCFC2-209ENST00000486016 BICRAQ9NZM4 1560 aa-0.14□□□□□ -2.43
GCFC2-209ENST00000486016 PXDNQ92626 1479 aa-0.14□□□□□ -2.43
GCFC2-209ENST00000486016 GPR98Q8WXG9 6306 aa-0.14□□□□□ -2.43
GCFC2-209ENST00000486016 SPEF2Q9C093 1822 aa-0.14□□□□□ -2.43
GCFC2-209ENST00000486016 TRAV13-2A0A0B4J235 113 aa-0.14□□□□□ -2.43
GCFC2-209ENST00000486016 SPAARA0A1B0GVQ0 90 aa-0.14□□□□□ -2.43
GCFC2-209ENST00000486016 PPP1R17O96001 155 aa-0.14□□□□□ -2.43
GCFC2-209ENST00000486016 RBM3P98179 157 aaKnown RBP-0.14□□□□□ -2.43
GCFC2-209ENST00000486016 NPVFQ9HCQ7 196 aa-0.14□□□□□ -2.43
GCFC2-209ENST00000486016 SCN3BQ9NY72 215 aa-0.14□□□□□ -2.43
GCFC2-209ENST00000486016 ZNF609O15014 1411 aa-0.14□□□□□ -2.43
GCFC2-209ENST00000486016 NWD2Q9ULI1 1742 aa-0.15□□□□□ -2.43
GCFC2-209ENST00000486016 BIVM-ERCC5R4GMW8 1640 aa-0.15□□□□□ -2.43
GCFC2-209ENST00000486016 LSM10Q969L4 123 aaKnown RBP-0.15□□□□□ -2.43
GCFC2-209ENST00000486016 AGPAT4-IT1Q9H0P7 198 aa-0.15□□□□□ -2.43
GCFC2-209ENST00000486016 R4GMQ9 66 aa-0.15□□□□□ -2.43
GCFC2-209ENST00000486016 ANK2Q01484 3957 aa-0.15□□□□□ -2.43
GCFC2-209ENST00000486016 MRC1P22897 1456 aa-0.16□□□□□ -2.43
GCFC2-209ENST00000486016 C10orf142B7Z368 130 aa-0.16□□□□□ -2.44
GCFC2-209ENST00000486016 M0R135 149 aa-0.16□□□□□ -2.44
GCFC2-209ENST00000486016 M0R3E3 92 aa-0.16□□□□□ -2.44
GCFC2-209ENST00000486016 C10orf128Q5T292 105 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms