RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 KCNIP4Q6PIL6 250 aa13.73□□□□□ -0.21
COL6A2-208ENST00000485591 RASL11AQ6T310 242 aa13.73□□□□□ -0.21
COL6A2-208ENST00000485591 GATD1Q8NB37 220 aa13.73□□□□□ -0.21
COL6A2-208ENST00000485591 ATP6V0E2Q8NHE4 81 aa13.73□□□□□ -0.21
COL6A2-208ENST00000485591 ZNRF2Q8NHG8 242 aa13.73□□□□□ -0.21
COL6A2-208ENST00000485591 FRZBQ92765 325 aa13.73□□□□□ -0.21
COL6A2-208ENST00000485591 BTF3L4Q96K17 158 aa13.73□□□□□ -0.21
COL6A2-208ENST00000485591 RPS10P5Q9NQ39 176 aa13.73□□□□□ -0.21
COL6A2-208ENST00000485591 MRPS16Q9Y3D3 137 aaKnown RBP13.73□□□□□ -0.21
COL6A2-208ENST00000485591 LYSTQ99698 3801 aa13.72□□□□□ -0.21
COL6A2-208ENST00000485591 UBE2D3P61077 147 aa13.72□□□□□ -0.21
COL6A2-208ENST00000485591 UBE2D2P62837 147 aa13.72□□□□□ -0.21
COL6A2-208ENST00000485591 AMN1Q8IY45 258 aa13.72□□□□□ -0.21
COL6A2-208ENST00000485591 RNF185Q96GF1 192 aa13.72□□□□□ -0.21
COL6A2-208ENST00000485591 DNAJC30Q96LL9 226 aa13.72□□□□□ -0.21
COL6A2-208ENST00000485591 UPK3BQ9BT76 320 aa13.72□□□□□ -0.21
COL6A2-208ENST00000485591 TRAV9-1A0A075B6T8 112 aa13.71□□□□□ -0.21
COL6A2-208ENST00000485591 RAB4AP20338 218 aa13.71□□□□□ -0.21
COL6A2-208ENST00000485591 GTSF1LQ9H1H1 148 aa13.71□□□□□ -0.21
COL6A2-208ENST00000485591 TRAV26-2A0A0B4J265 109 aa13.7□□□□□ -0.22
COL6A2-208ENST00000485591 NIT2Q9NQR4 276 aa13.7□□□□□ -0.22
COL6A2-208ENST00000485591 S100PP25815 95 aa13.69□□□□□ -0.22
COL6A2-208ENST00000485591 FAM104BQ5XKR9 115 aa13.69□□□□□ -0.22
COL6A2-208ENST00000485591 MRAP2Q96G30 205 aa13.69□□□□□ -0.22
COL6A2-208ENST00000485591 TNFRSF18Q9Y5U5 241 aa13.69□□□□□ -0.22
COL6A2-208ENST00000485591 KMT2CQ8NEZ4 4911 aaKnown RBP13.68□□□□□ -0.22
COL6A2-208ENST00000485591 DNAH1Q9P2D7 4330 aa13.68□□□□□ -0.22
COL6A2-208ENST00000485591 MRPL51Q4U2R6 128 aaKnown RBP13.66□□□□□ -0.22
COL6A2-208ENST00000485591 LELP1Q5T871 98 aa13.66□□□□□ -0.22
COL6A2-208ENST00000485591 DAZ4Q86SG3 579 aaKnown RBP13.66□□□□□ -0.22
COL6A2-208ENST00000485591 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.66□□□□□ -0.22
COL6A2-208ENST00000485591 RPL39LQ96EH5 51 aaKnown RBP13.66□□□□□ -0.22
COL6A2-208ENST00000485591 DAZ3Q9NR90 486 aaKnown RBP13.66□□□□□ -0.22
COL6A2-208ENST00000485591 URGCP-MRPS24S4R325 110 aa13.66□□□□□ -0.22
COL6A2-208ENST00000485591 VPS13DQ5THJ4 4388 aa13.64□□□□□ -0.23
COL6A2-208ENST00000485591 TRBV6-5A0A0K0K1A5 114 aa13.64□□□□□ -0.23
COL6A2-208ENST00000485591 GAS8-AS1O95177 125 aa13.64□□□□□ -0.23
COL6A2-208ENST00000485591 OR10J3Q5JRS4 329 aa13.64□□□□□ -0.23
COL6A2-208ENST00000485591 Q9H8V8 135 aa13.64□□□□□ -0.23
COL6A2-208ENST00000485591 IGHV3-38A0A0C4DH36 116 aa13.63□□□□□ -0.23
COL6A2-208ENST00000485591 ATRAIDQ6UW56 229 aa13.63□□□□□ -0.23
COL6A2-208ENST00000485591 SACSQ9NZJ4 4579 aa13.62□□□□□ -0.23
COL6A2-208ENST00000485591 TRAV8-6A0A0B4J262 113 aa13.62□□□□□ -0.23
COL6A2-208ENST00000485591 SMKR1H3BMG3 65 aa13.62□□□□□ -0.23
COL6A2-208ENST00000485591 SIVA1O15304 175 aa13.62□□□□□ -0.23
COL6A2-208ENST00000485591 NCR2O95944 276 aa13.62□□□□□ -0.23
COL6A2-208ENST00000485591 RPS10P46783 165 aaKnown RBP13.62□□□□□ -0.23
COL6A2-208ENST00000485591 TMEM97Q5BJF2 176 aa13.62□□□□□ -0.23
COL6A2-208ENST00000485591 WFDC10BQ8IUB3 73 aa13.62□□□□□ -0.23
COL6A2-208ENST00000485591 PPP1R17O96001 155 aa13.61□□□□□ -0.23
COL6A2-208ENST00000485591 NRACQ8N912 160 aa13.61□□□□□ -0.23
COL6A2-208ENST00000485591 IGLV2-18A0A075B6J9 118 aa13.6□□□□□ -0.23
COL6A2-208ENST00000485591 TRBV6-8A0A0A6YYG3 113 aa13.6□□□□□ -0.23
COL6A2-208ENST00000485591 PPBPP02775 128 aa13.6□□□□□ -0.23
COL6A2-208ENST00000485591 CKS2P33552 79 aa13.6□□□□□ -0.23
COL6A2-208ENST00000485591 TMEM136Q6ZRR5 245 aa13.6□□□□□ -0.23
COL6A2-208ENST00000485591 SDHAF1A6NFY7 115 aa13.59□□□□□ -0.23
COL6A2-208ENST00000485591 D6R8Y8 96 aa13.59□□□□□ -0.23
COL6A2-208ENST00000485591 ELOBQ15370 118 aa13.59□□□□□ -0.23
COL6A2-208ENST00000485591 COX19Q49B96 90 aa13.59□□□□□ -0.23
COL6A2-208ENST00000485591 ST20Q9HBF5 79 aa13.59□□□□□ -0.23
COL6A2-208ENST00000485591 HYDINQ4G0P3 5121 aa13.59□□□□□ -0.23
COL6A2-208ENST00000485591 RYR2Q92736 4967 aa13.59□□□□□ -0.23
COL6A2-208ENST00000485591 NBDYA0A0U1RRE5 68 aa13.58□□□□□ -0.24
COL6A2-208ENST00000485591 DNAH10OSP0CZ25 163 aa13.58□□□□□ -0.24
COL6A2-208ENST00000485591 NTM-AS1Q6ZSK4 140 aa13.58□□□□□ -0.24
COL6A2-208ENST00000485591 TRBV24-1A0A075B6N3 115 aa13.57□□□□□ -0.24
COL6A2-208ENST00000485591 HLA-DQA1P01909 254 aa13.57□□□□□ -0.24
COL6A2-208ENST00000485591 TTC32Q5I0X7 151 aa13.57□□□□□ -0.24
COL6A2-208ENST00000485591 Q6ZR54 194 aa13.57□□□□□ -0.24
COL6A2-208ENST00000485591 ORMDL3Q8N138 153 aa13.57□□□□□ -0.24
COL6A2-208ENST00000485591 TMEM70Q9BUB7 260 aa13.57□□□□□ -0.24
COL6A2-208ENST00000485591 GNB1LQ9BYB4 327 aa13.57□□□□□ -0.24
COL6A2-208ENST00000485591 DNAH6Q9C0G6 4158 aa13.56□□□□□ -0.24
COL6A2-208ENST00000485591 TGIF2-C20orf24A0A0A6YYL0 155 aa13.56□□□□□ -0.24
COL6A2-208ENST00000485591 POLR2KP53803 58 aaKnown RBP13.56□□□□□ -0.24
COL6A2-208ENST00000485591 SUMO2P61956 95 aaKnown RBP13.56□□□□□ -0.24
COL6A2-208ENST00000485591 COTL1Q14019 142 aa13.56□□□□□ -0.24
COL6A2-208ENST00000485591 LINC01556Q5JQF7 62 aa13.56□□□□□ -0.24
COL6A2-208ENST00000485591 C20orf78Q9BR46 151 aa13.56□□□□□ -0.24
COL6A2-208ENST00000485591 TRBV25-1A0A075B6N4 114 aa13.55□□□□□ -0.24
COL6A2-208ENST00000485591 I3L3M4 83 aa13.55□□□□□ -0.24
COL6A2-208ENST00000485591 M0R2N4 97 aa13.55□□□□□ -0.24
COL6A2-208ENST00000485591 PHOX2AO14813 284 aa13.55□□□□□ -0.24
COL6A2-208ENST00000485591 TNFRSF6BO95407 300 aa13.55□□□□□ -0.24
COL6A2-208ENST00000485591 IQCJQ1A5X6 159 aa13.55□□□□□ -0.24
COL6A2-208ENST00000485591 YPEL4Q96NS1 127 aa13.55□□□□□ -0.24
COL6A2-208ENST00000485591 SMCO4Q9NRQ5 59 aa13.55□□□□□ -0.24
COL6A2-208ENST00000485591 IGHV1-24A0A0C4DH33 117 aa13.54□□□□□ -0.24
COL6A2-208ENST00000485591 TRBV27A0A0K0K1C4 114 aa13.54□□□□□ -0.24
COL6A2-208ENST00000485591 K7EP13 123 aa13.54□□□□□ -0.24
COL6A2-208ENST00000485591 NPYP01303 97 aa13.54□□□□□ -0.24
COL6A2-208ENST00000485591 MT-ND6P03923 174 aa13.54□□□□□ -0.24
COL6A2-208ENST00000485591 CBLN2Q8IUK8 224 aa13.54□□□□□ -0.24
COL6A2-208ENST00000485591 PRELID3AQ96N28 172 aa13.54□□□□□ -0.24
COL6A2-208ENST00000485591 KRTAP1-5Q9BYS1 174 aa13.54□□□□□ -0.24
COL6A2-208ENST00000485591 LAMTOR2Q9Y2Q5 125 aa13.54□□□□□ -0.24
COL6A2-208ENST00000485591 KMT2AQ03164 3969 aa13.54□□□□□ -0.24
COL6A2-208ENST00000485591 PMCHP20382 165 aa13.53□□□□□ -0.24
COL6A2-208ENST00000485591 RPL32P62910 135 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms