RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 PARP14Q460N5 1801 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 FOCADQ5VW36 1801 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 AGLP35573 1532 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 UGGT2Q9NYU1 1516 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 NISCHQ9Y2I1 1504 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 FER1L6Q2WGJ9 1857 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 NUP210LQ5VU65 1888 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 UNC13BO14795 1591 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 INO80Q9ULG1 1556 aaPredicted RBP-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 A0A0J9YY99 117 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 A0A1B0GW64 132 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 FAM159BA6NKW6 160 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 IFITM5A6NNB3 132 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 K7EP13 123 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 AIPO00170 330 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 NIPSNAP2O75323 286 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 DCTN3O75935 186 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 DEXIO95424 95 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 DHFRP00374 187 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 IGHV3-30P01768 117 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 IGHV3-33P01772 117 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 TCRBP04435 133 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 SFTA3P0C7M3 94 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 IGHV3-30-5P0DP03 117 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 DEFB130BP0DP73 79 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 DEFB130AP0DP74 79 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 EVI2AP22794 236 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 ATP5G3P48201 142 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 MAXP61244 160 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 RPS28P62857 69 aaKnown RBP-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 RPL19P84098 196 aaKnown RBP-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 DIAPH2-AS1Q14236 149 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 CDKL4Q5MAI5 379 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 C8orf74Q6P047 294 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 C3orf62Q6ZUJ4 267 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 Q6ZUT4 128 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 SNX29P2Q8IUI4 249 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 FAM223AQ8IWN6 122 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 OR6V1Q8N148 313 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 C12orf45Q8N5I9 185 aaPredicted RBP-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 ATP6V0E2Q8NHE4 81 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 MYOZ3Q8TDC0 251 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 ZNF431Q8TF32 576 aaPredicted RBP-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 PLEKHB2Q96CS7 222 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 MUCL1Q96DR8 90 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 ZNF714Q96N38 554 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 MRPL34Q9BQ48 92 aaKnown RBP-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 LINC00467Q9BRT7 94 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 OR2H1Q9GZK4 316 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 WFDC10AQ9H1F0 79 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 BOLA2Q9H3K6 86 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 TAF9BQ9HBM6 251 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 BCL2L10Q9HD36 194 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 MRPL40Q9NQ50 206 aaKnown RBP-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 UBAP1Q9NZ09 502 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 SS18L2Q9UHA2 77 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 LY96Q9Y6Y9 160 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 MYH1P12882 1939 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 TOP2BQ02880 1626 aa-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 FAM208AQ9UK61 1670 aaKnown RBP-0.47□□□□□ -2.48
CCDC66-219ENST00000484441 DDX60LQ5H9U9 1706 aaKnown RBP-0.47□□□□□ -2.49
CCDC66-219ENST00000484441 KIAA1551Q9HCM1 1747 aa-0.47□□□□□ -2.49
CCDC66-219ENST00000484441 NWD2Q9ULI1 1742 aa-0.47□□□□□ -2.49
CCDC66-219ENST00000484441 LTN1O94822 1766 aa-0.47□□□□□ -2.49
CCDC66-219ENST00000484441 ZNF518AQ6AHZ1 1483 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 ANKRD36A6QL64 1941 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 MYH9P35579 1960 aaKnown RBP-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 ADCY10Q96PN6 1610 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 ADGBQ8N7X0 1667 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 A0A096LNI7 61 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 TRAV22A0A0B4J277 110 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 UBE2L5PA0A1B0GUS4 154 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 ODAMA1E959 279 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 C9orf170A2RU37 121 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 ZNF727A8MUV8 499 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 DEFB108AA8MXU0 73 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 HCG22E2RYF7 251 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 NDUFC1O43677 76 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 E2F6O75461 281 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 PIAS1O75925 651 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 TNFSF15O95150 251 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 NMBP08949 121 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 APELAP0DMC3 54 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 SMIM10L2AP0DMW4 78 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 SMIM10L2BP0DMW5 78 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 MAGEA2P43356 314 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 RPL5P46777 297 aaKnown RBP-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 ROMO1P60602 79 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 SNRPD3P62318 126 aaKnown RBP-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 UBE2BP63146 152 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 HIST3H3Q16695 136 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 RTL8BQ17RB0 113 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 C9orf116Q5BN46 136 aaPredicted RBP-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 LINC00299Q6ZSB3 139 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 SSBP3-AS1Q7Z2R9 100 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 WFDC10BQ8IUB3 73 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 DEFB106AQ8N104 65 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 ANKRD29Q8N6D5 301 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 FAM216BQ8N7L0 139 aa-0.48□□□□□ -2.49
CCDC66-219ENST00000484441 C5orf17Q8NAS9 161 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms