RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 RNASE7Q9H1E1 156 aaKnown RBP8.6□□□□□ -1.03
HDAC1-209ENST00000484305 APOBP04114 4563 aaKnown RBP8.6□□□□□ -1.03
HDAC1-209ENST00000484305 PCLOQ9Y6V0 5065 aa8.59□□□□□ -1.03
HDAC1-209ENST00000484305 F2Z2F3 143 aa8.59□□□□□ -1.03
HDAC1-209ENST00000484305 TMEM250H0YL14 139 aa8.59□□□□□ -1.03
HDAC1-209ENST00000484305 CACNG7P62955 275 aa8.59□□□□□ -1.03
HDAC1-209ENST00000484305 MAPKAPK5-AS1Q8N8E1 139 aa8.59□□□□□ -1.03
HDAC1-209ENST00000484305 URGCP-MRPS24S4R325 110 aa8.59□□□□□ -1.03
HDAC1-209ENST00000484305 TRBV6-8A0A0A6YYG3 113 aa8.58□□□□□ -1.04
HDAC1-209ENST00000484305 TRAV8-3A0A0A6YYJ7 113 aa8.58□□□□□ -1.04
HDAC1-209ENST00000484305 MGPP08493 103 aa8.58□□□□□ -1.04
HDAC1-209ENST00000484305 NTF3P20783 257 aa8.58□□□□□ -1.04
HDAC1-209ENST00000484305 KRTAP10-1P60331 282 aa8.58□□□□□ -1.04
HDAC1-209ENST00000484305 DNAJC30Q96LL9 226 aa8.58□□□□□ -1.04
HDAC1-209ENST00000484305 TM2D2Q9BX73 214 aa8.58□□□□□ -1.04
HDAC1-209ENST00000484305 RPP21Q9H633 154 aaKnown RBP8.58□□□□□ -1.04
HDAC1-209ENST00000484305 KLK12Q9UKR0 248 aa8.58□□□□□ -1.04
HDAC1-209ENST00000484305 J3QL48 77 aa8.57□□□□□ -1.04
HDAC1-209ENST00000484305 M0QY20 66 aa8.57□□□□□ -1.04
HDAC1-209ENST00000484305 CEBPGP53567 150 aa8.57□□□□□ -1.04
HDAC1-209ENST00000484305 TOR2AQ5JU69 321 aa8.57□□□□□ -1.04
HDAC1-209ENST00000484305 A0A087WX48 190 aa8.56□□□□□ -1.04
HDAC1-209ENST00000484305 CTRLP40313 264 aa8.56□□□□□ -1.04
HDAC1-209ENST00000484305 WFDC2Q14508 124 aa8.56□□□□□ -1.04
HDAC1-209ENST00000484305 SUMO4Q6EEV6 95 aa8.56□□□□□ -1.04
HDAC1-209ENST00000484305 NTM-AS1Q6ZSK4 140 aa8.56□□□□□ -1.04
HDAC1-209ENST00000484305 Q8N814 137 aa8.56□□□□□ -1.04
HDAC1-209ENST00000484305 CHCHD7Q9BUK0 85 aa8.56□□□□□ -1.04
HDAC1-209ENST00000484305 EIF5A2Q9GZV4 153 aaKnown RBP8.56□□□□□ -1.04
HDAC1-209ENST00000484305 TMEM262E9PQX1 116 aa8.55□□□□□ -1.04
HDAC1-209ENST00000484305 TRGC1P0CF51 173 aa8.55□□□□□ -1.04
HDAC1-209ENST00000484305 GCSHP23434 173 aa8.55□□□□□ -1.04
HDAC1-209ENST00000484305 WDR73Q6P4I2 378 aa8.55□□□□□ -1.04
HDAC1-209ENST00000484305 KCNIP4Q6PIL6 250 aa8.55□□□□□ -1.04
HDAC1-209ENST00000484305 Q8N1X5 172 aa8.55□□□□□ -1.04
HDAC1-209ENST00000484305 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.55□□□□□ -1.04
HDAC1-209ENST00000484305 GTSF1Q8WW33 167 aa8.55□□□□□ -1.04
HDAC1-209ENST00000484305 FAM210AQ96ND0 272 aa8.55□□□□□ -1.04
HDAC1-209ENST00000484305 ABCA13Q86UQ4 5058 aa8.55□□□□□ -1.04
HDAC1-209ENST00000484305 IGLV5-52A0A0A0MRZ9 124 aa8.54□□□□□ -1.04
HDAC1-209ENST00000484305 H7C1H1 209 aa8.54□□□□□ -1.04
HDAC1-209ENST00000484305 LECT2O14960 151 aa8.54□□□□□ -1.04
HDAC1-209ENST00000484305 XGP55808 180 aa8.54□□□□□ -1.04
HDAC1-209ENST00000484305 TWIST1Q15672 202 aa8.54□□□□□ -1.04
HDAC1-209ENST00000484305 MPV17L2Q567V2 206 aa8.54□□□□□ -1.04
HDAC1-209ENST00000484305 NTN5Q8WTR8 489 aaPredicted RBP8.54□□□□□ -1.04
HDAC1-209ENST00000484305 UBE2WQ96B02 151 aa8.54□□□□□ -1.04
HDAC1-209ENST00000484305 CHCHD5Q9BSY4 110 aa8.54□□□□□ -1.04
HDAC1-209ENST00000484305 CNFNQ9BYD5 112 aa8.54□□□□□ -1.04
HDAC1-209ENST00000484305 DPH3P1Q9H4G8 78 aa8.54□□□□□ -1.04
HDAC1-209ENST00000484305 IGKV2D-24A0A075B6R9 120 aa8.53□□□□□ -1.04
HDAC1-209ENST00000484305 GATCO43716 136 aaKnown RBP8.53□□□□□ -1.04
HDAC1-209ENST00000484305 ELOBQ15370 118 aa8.53□□□□□ -1.04
HDAC1-209ENST00000484305 TMEM97Q5BJF2 176 aa8.53□□□□□ -1.04
HDAC1-209ENST00000484305 RASL11AQ6T310 242 aa8.53□□□□□ -1.04
HDAC1-209ENST00000484305 FAM231DQ6ZW35 169 aa8.53□□□□□ -1.04
HDAC1-209ENST00000484305 BAALCQ8WXS3 180 aa8.53□□□□□ -1.04
HDAC1-209ENST00000484305 RMI2Q96E14 147 aa8.53□□□□□ -1.04
HDAC1-209ENST00000484305 SMIM7Q9BQ49 75 aa8.53□□□□□ -1.04
HDAC1-209ENST00000484305 COX11Q9Y6N1 276 aa8.53□□□□□ -1.04
HDAC1-209ENST00000484305 NDUFS6O75380 124 aaKnown RBP8.52□□□□□ -1.05
HDAC1-209ENST00000484305 SRP19P09132 144 aaKnown RBP8.52□□□□□ -1.05
HDAC1-209ENST00000484305 ATRAIDQ6UW56 229 aa8.52□□□□□ -1.05
HDAC1-209ENST00000484305 ENHOQ6UWT2 76 aa8.52□□□□□ -1.05
HDAC1-209ENST00000484305 C15orf54Q8N8G6 183 aa8.52□□□□□ -1.05
HDAC1-209ENST00000484305 Q8N976 141 aa8.52□□□□□ -1.05
HDAC1-209ENST00000484305 TRBV25-1A0A075B6N4 114 aa8.51□□□□□ -1.05
HDAC1-209ENST00000484305 A8MWL6 223 aa8.51□□□□□ -1.05
HDAC1-209ENST00000484305 ANGP03950 147 aaKnown RBP8.51□□□□□ -1.05
HDAC1-209ENST00000484305 FOXA3P55318 350 aaPredicted RBP8.51□□□□□ -1.05
HDAC1-209ENST00000484305 Q0VG73 95 aa8.51□□□□□ -1.05
HDAC1-209ENST00000484305 GAGE6Q13070 117 aa8.51□□□□□ -1.05
HDAC1-209ENST00000484305 LINC01551Q86U37 167 aa8.51□□□□□ -1.05
HDAC1-209ENST00000484305 DEFB104AQ8WTQ1 72 aa8.51□□□□□ -1.05
HDAC1-209ENST00000484305 PGLYRP4Q96LB8 373 aa8.51□□□□□ -1.05
HDAC1-209ENST00000484305 NIT2Q9NQR4 276 aa8.51□□□□□ -1.05
HDAC1-209ENST00000484305 TRAV26-2A0A0B4J265 109 aa8.5□□□□□ -1.05
HDAC1-209ENST00000484305 IGHV1-24A0A0C4DH33 117 aa8.5□□□□□ -1.05
HDAC1-209ENST00000484305 ZNF727A8MUV8 499 aa8.5□□□□□ -1.05
HDAC1-209ENST00000484305 SMCPP49901 116 aaPredicted RBP8.5□□□□□ -1.05
HDAC1-209ENST00000484305 PKIAP61925 76 aa8.5□□□□□ -1.05
HDAC1-209ENST00000484305 IQCJQ1A5X6 159 aa8.5□□□□□ -1.05
HDAC1-209ENST00000484305 GATD1Q8NB37 220 aa8.5□□□□□ -1.05
HDAC1-209ENST00000484305 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.49□□□□□ -1.05
HDAC1-209ENST00000484305 CRPP02741 224 aa8.49□□□□□ -1.05
HDAC1-209ENST00000484305 RBX1P62877 108 aa8.49□□□□□ -1.05
HDAC1-209ENST00000484305 CT83Q5H943 113 aa8.49□□□□□ -1.05
HDAC1-209ENST00000484305 TEX261Q6UWH6 196 aa8.49□□□□□ -1.05
HDAC1-209ENST00000484305 C9JQL5 133 aa8.48□□□□□ -1.05
HDAC1-209ENST00000484305 HAMPP81172 84 aa8.48□□□□□ -1.05
HDAC1-209ENST00000484305 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
HDAC1-209ENST00000484305 C1orf43Q9BWL3 253 aa8.48□□□□□ -1.05
HDAC1-209ENST00000484305 SRSF3P84103 164 aaKnown RBP8.47□□□□□ -1.05
HDAC1-209ENST00000484305 CLPSL2Q6UWE3 100 aa8.47□□□□□ -1.05
HDAC1-209ENST00000484305 SMIM15Q7Z3B0 74 aa8.47□□□□□ -1.05
HDAC1-209ENST00000484305 LINC00269Q8N2A0 174 aa8.47□□□□□ -1.05
HDAC1-209ENST00000484305 TSKUQ8WUA8 353 aa8.47□□□□□ -1.05
HDAC1-209ENST00000484305 TMEM243Q9BU79 118 aa8.47□□□□□ -1.05
HDAC1-209ENST00000484305 TMEM70Q9BUB7 260 aa8.47□□□□□ -1.05
HDAC1-209ENST00000484305 OSTCQ9NRP0 149 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms