RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TNS1Q9HBL0 1735 aaKnown RBP2.02□□□□□ -2.09
PTCD3-214ENST00000483925 PXDNQ92626 1479 aa2.01□□□□□ -2.09
PTCD3-214ENST00000483925 ANKRD36BQ8N2N9 1353 aa2.01□□□□□ -2.09
PTCD3-214ENST00000483925 ARAP2Q8WZ64 1704 aa2.01□□□□□ -2.09
PTCD3-214ENST00000483925 IGKV2-40A0A087WW87 121 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-214ENST00000483925 IGKV2-29A2NJV5 120 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-214ENST00000483925 CRYM-AS1A6NIL9 109 aa2.01□□□□□ -2.09
PTCD3-214ENST00000483925 IGKV2D-40P01614 121 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-214ENST00000483925 GYPAP02724 150 aa2.01□□□□□ -2.09
PTCD3-214ENST00000483925 CCL3L1P16619 93 aa2.01□□□□□ -2.09
PTCD3-214ENST00000483925 BET1LQ9NYM9 111 aa2.01□□□□□ -2.09
PTCD3-214ENST00000483925 FN1P02751 2386 aaKnown RBP2.01□□□□□ -2.09
PTCD3-214ENST00000483925 RTTNQ86VV8 2226 aa2.01□□□□□ -2.09
PTCD3-214ENST00000483925 GOLGA3Q08378 1498 aa2.01□□□□□ -2.09
PTCD3-214ENST00000483925 MED12LQ86YW9 2145 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 NWD2Q9ULI1 1742 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 TOPAZ1Q8N9V7 1692 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 TRBV7-3A0A075B6L6 115 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 NBDYA0A0U1RRE5 68 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 NDUFC1O43677 76 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 FXYD4P59646 89 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 ELOF1P60002 83 aaKnown RBP2□□□□□ -2.09
PTCD3-214ENST00000483925 SEC11AP67812 179 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 ZNF56Q15929 161 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 COX7B2Q8TF08 81 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 LCN9Q8WX39 176 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 MGST2Q99735 147 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 PRDM15P57071 1507 aaPredicted RBP2□□□□□ -2.09
PTCD3-214ENST00000483925 PLEKHH2Q8IVE3 1493 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 KIAA1551Q9HCM1 1747 aa2□□□□□ -2.09
PTCD3-214ENST00000483925 ALPK2Q86TB3 2170 aa1.99□□□□□ -2.09
PTCD3-214ENST00000483925 SHROOM2Q13796 1616 aa1.99□□□□□ -2.09
PTCD3-214ENST00000483925 HEATR1Q9H583 2144 aaKnown RBP1.99□□□□□ -2.09
PTCD3-214ENST00000483925 PCOTHQ58A44 107 aa1.99□□□□□ -2.09
PTCD3-214ENST00000483925 ZCCHC13Q8WW36 166 aaKnown RBP1.99□□□□□ -2.09
PTCD3-214ENST00000483925 FAM167A-AS1Q96KT0 104 aa1.99□□□□□ -2.09
PTCD3-214ENST00000483925 OBSCN-AS1Q96MR7 158 aa1.99□□□□□ -2.09
PTCD3-214ENST00000483925 UQCR10Q9UDW1 63 aa1.99□□□□□ -2.09
PTCD3-214ENST00000483925 LENEPQ9Y5L5 61 aa1.99□□□□□ -2.09
PTCD3-214ENST00000483925 ABCC3O15438 1527 aa1.99□□□□□ -2.09
PTCD3-214ENST00000483925 CITO14578 2027 aa1.99□□□□□ -2.09
PTCD3-214ENST00000483925 LRRC37A3O60309 1634 aa1.99□□□□□ -2.09
PTCD3-214ENST00000483925 ICE1Q9Y2F5 2266 aa1.98□□□□□ -2.09
PTCD3-214ENST00000483925 CR1P17927 2039 aa1.98□□□□□ -2.09
PTCD3-214ENST00000483925 VWDEQ8N2E2 1590 aa1.98□□□□□ -2.09
PTCD3-214ENST00000483925 BAZ2BQ9UIF8 2168 aaKnown RBP1.98□□□□□ -2.09
PTCD3-214ENST00000483925 SFT2D2O95562 160 aa1.98□□□□□ -2.09
PTCD3-214ENST00000483925 KRTAP10-10P60014 251 aa1.98□□□□□ -2.09
PTCD3-214ENST00000483925 PYY3Q5JQD4 70 aa1.98□□□□□ -2.09
PTCD3-214ENST00000483925 Q6ZQY7 126 aa1.98□□□□□ -2.09
PTCD3-214ENST00000483925 C5orf56Q8N8D9 126 aa1.98□□□□□ -2.09
PTCD3-214ENST00000483925 FAM213BQ8TBF2 198 aa1.98□□□□□ -2.09
PTCD3-214ENST00000483925 TSLPQ969D9 159 aa1.98□□□□□ -2.09
PTCD3-214ENST00000483925 DOCK10Q96BY6 2186 aa1.98□□□□□ -2.09
PTCD3-214ENST00000483925 LAMC3Q9Y6N6 1575 aa1.98□□□□□ -2.09
PTCD3-214ENST00000483925 PTPRDP23468 1912 aa1.97□□□□□ -2.09
PTCD3-214ENST00000483925 ABCA3Q99758 1704 aa1.97□□□□□ -2.09
PTCD3-214ENST00000483925 TRBV7-7A0A0K0K1E9 115 aa1.97□□□□□ -2.09
PTCD3-214ENST00000483925 CLPSL1A2RUU4 121 aa1.97□□□□□ -2.09
PTCD3-214ENST00000483925 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
PTCD3-214ENST00000483925 PRO1933Q9H354 126 aa1.97□□□□□ -2.09
PTCD3-214ENST00000483925 NPVFQ9HCQ7 196 aa1.97□□□□□ -2.09
PTCD3-214ENST00000483925 DYNLRB1Q9NP97 96 aa1.97□□□□□ -2.09
PTCD3-214ENST00000483925 MANBALQ9NQG1 85 aa1.97□□□□□ -2.09
PTCD3-214ENST00000483925 RREB1Q92766 1687 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 ARHGAP35Q9NRY4 1499 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 DLEC1Q9Y238 1755 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 LOC285095A0A1B0GVY8 99 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 FXYD1O00168 92 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 COX6CP09669 75 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 CAV3P56539 151 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 EDDM3BP56851 147 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 UBE2D3P61077 147 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 UBE2D2P62837 147 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 KLKP1Q107X0 134 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 C6orf52Q5T4I8 152 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 TRGV9Q99603 122 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 PRO1854Q9UHT4 67 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 V9GYV3 84 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 MARF1Q9Y4F3 1742 aaKnown RBP1.96□□□□□ -2.1
PTCD3-214ENST00000483925 ARHGEF12Q9NZN5 1544 aa1.96□□□□□ -2.1
PTCD3-214ENST00000483925 UNC13CQ8NB66 2214 aa1.95□□□□□ -2.1
PTCD3-214ENST00000483925 MYOFQ9NZM1 2061 aa1.95□□□□□ -2.1
PTCD3-214ENST00000483925 FAUP35544 74 aaKnown RBP1.95□□□□□ -2.1
PTCD3-214ENST00000483925 SERP2Q8N6R1 65 aa1.95□□□□□ -2.1
PTCD3-214ENST00000483925 LINC00208Q96KT6 92 aa1.95□□□□□ -2.1
PTCD3-214ENST00000483925 SHANK2Q9UPX8 1470 aa1.94□□□□□ -2.1
PTCD3-214ENST00000483925 FREM1Q5H8C1 2179 aa1.94□□□□□ -2.1
PTCD3-214ENST00000483925 CHKB-CPT1BH3BT56 60 aa1.94□□□□□ -2.1
PTCD3-214ENST00000483925 PPP1R17O96001 155 aa1.94□□□□□ -2.1
PTCD3-214ENST00000483925 Q86TA4 180 aa1.94□□□□□ -2.1
PTCD3-214ENST00000483925 NDUFA4L2Q9NRX3 87 aa1.94□□□□□ -2.1
PTCD3-214ENST00000483925 CACFD1Q9UGQ2 172 aa1.94□□□□□ -2.1
PTCD3-214ENST00000483925 CACNA1GO43497 2377 aa1.94□□□□□ -2.1
PTCD3-214ENST00000483925 PHRF1Q9P1Y6 1649 aaKnown RBP1.94□□□□□ -2.1
PTCD3-214ENST00000483925 NRXN2Q9P2S2 1712 aa1.94□□□□□ -2.1
PTCD3-214ENST00000483925 TNRC6BQ9UPQ9 1833 aaKnown RBP1.94□□□□□ -2.1
PTCD3-214ENST00000483925 UACAQ9BZF9 1416 aa1.93□□□□□ -2.1
PTCD3-214ENST00000483925 GBF1Q92538 1859 aa1.93□□□□□ -2.1
PTCD3-214ENST00000483925 K7EP34 96 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms