RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 MIFP14174 115 aa7.94□□□□□ -1.14
COL12A1-207ENST00000483888 ZNF672Q499Z4 452 aaPredicted RBP7.94□□□□□ -1.14
COL12A1-207ENST00000483888 Q6ZQT7 251 aa7.94□□□□□ -1.14
COL12A1-207ENST00000483888 J3QLI3 93 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 H7C423 109 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 COX6B1P14854 86 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 RNF114Q9Y508 228 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 NDUFA4O00483 81 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 A0A0J9YY99 117 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 DIRC1Q969H9 104 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 H3BUX3 64 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 K7ERS5 55 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 SLPIP03973 132 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 A0A096LPF7 62 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 H0Y9J4 135 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 GATA3P23771 443 aa7.93□□□□□ -1.14
COL12A1-207ENST00000483888 C4orf26Q17RF5 130 aa7.92□□□□□ -1.14
COL12A1-207ENST00000483888 C9orf47Q6ZRZ4 202 aa7.92□□□□□ -1.14
COL12A1-207ENST00000483888 PSPHP1O15172 72 aa7.92□□□□□ -1.14
COL12A1-207ENST00000483888 UBE2DNLQ8IWF7 75 aa7.92□□□□□ -1.14
COL12A1-207ENST00000483888 FGF23Q9GZV9 251 aaPredicted RBP7.92□□□□□ -1.14
COL12A1-207ENST00000483888 PRR19A6NJB7 356 aa7.92□□□□□ -1.14
COL12A1-207ENST00000483888 SAA4P35542 130 aa7.92□□□□□ -1.14
COL12A1-207ENST00000483888 SEM1Q6ZVN7 128 aa7.92□□□□□ -1.14
COL12A1-207ENST00000483888 PRORYQ9H606 182 aa7.92□□□□□ -1.14
COL12A1-207ENST00000483888 MDFICQ9P1T7 246 aa7.92□□□□□ -1.14
COL12A1-207ENST00000483888 IGHV3-30P01768 117 aa7.92□□□□□ -1.14
COL12A1-207ENST00000483888 IGHV3-30-5P0DP03 117 aa7.92□□□□□ -1.14
COL12A1-207ENST00000483888 PRR4Q16378 134 aa7.92□□□□□ -1.14
COL12A1-207ENST00000483888 G3V318 75 aa7.91□□□□□ -1.14
COL12A1-207ENST00000483888 IGLV3-1P01715 115 aa7.91□□□□□ -1.14
COL12A1-207ENST00000483888 TIRAPP58753 221 aa7.91□□□□□ -1.14
COL12A1-207ENST00000483888 NEXN-AS1Q8NBZ9 246 aa7.91□□□□□ -1.14
COL12A1-207ENST00000483888 TRAV7A0A075B6U4 112 aa7.91□□□□□ -1.14
COL12A1-207ENST00000483888 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.91□□□□□ -1.14
COL12A1-207ENST00000483888 PATE2Q6UY27 113 aa7.91□□□□□ -1.14
COL12A1-207ENST00000483888 C11orf1Q9H5F2 150 aa7.91□□□□□ -1.14
COL12A1-207ENST00000483888 BRD3OSQ6XYD6 125 aa7.9□□□□□ -1.14
COL12A1-207ENST00000483888 ZFAND3Q9H8U3 227 aa7.9□□□□□ -1.14
COL12A1-207ENST00000483888 TECTAO75443 2155 aa7.9□□□□□ -1.14
COL12A1-207ENST00000483888 CREBBPQ92793 2442 aa7.9□□□□□ -1.15
COL12A1-207ENST00000483888 IGLV2-8P01709 118 aa7.89□□□□□ -1.15
COL12A1-207ENST00000483888 LST1O00453 97 aa7.89□□□□□ -1.15
COL12A1-207ENST00000483888 DIAPH2-AS1Q14236 149 aa7.89□□□□□ -1.15
COL12A1-207ENST00000483888 Q6JHZ5 121 aa7.89□□□□□ -1.15
COL12A1-207ENST00000483888 NOP10Q9NPE3 64 aaKnown RBP7.89□□□□□ -1.15
COL12A1-207ENST00000483888 IGHV7-4-1A0A0J9YVY3 117 aa7.89□□□□□ -1.15
COL12A1-207ENST00000483888 WFDC10BQ8IUB3 73 aa7.89□□□□□ -1.15
COL12A1-207ENST00000483888 DEFB123Q8N688 67 aa7.89□□□□□ -1.15
COL12A1-207ENST00000483888 A8MZ25 164 aa7.88□□□□□ -1.15
COL12A1-207ENST00000483888 LINC00322Q6ZN03 302 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-207ENST00000483888 IGLV3-9A0A075B6K5 115 aa7.88□□□□□ -1.15
COL12A1-207ENST00000483888 RSPO1Q2MKA7 263 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-207ENST00000483888 IGLV10-54A0A075B6I4 117 aa7.88□□□□□ -1.15
COL12A1-207ENST00000483888 B3GALT5-AS1P59052 145 aa7.88□□□□□ -1.15
COL12A1-207ENST00000483888 TRBV6-1A0A0K0K1D8 114 aa7.88□□□□□ -1.15
COL12A1-207ENST00000483888 TMEM223A0PJW6 202 aa7.88□□□□□ -1.15
COL12A1-207ENST00000483888 K7EQD1 137 aa7.88□□□□□ -1.15
COL12A1-207ENST00000483888 IGHV4-59P01825 116 aa7.88□□□□□ -1.15
COL12A1-207ENST00000483888 LINC00311Q8N616 119 aa7.88□□□□□ -1.15
COL12A1-207ENST00000483888 TMEM263Q8WUH6 116 aaKnown RBP7.87□□□□□ -1.15
COL12A1-207ENST00000483888 Q8N976 141 aa7.87□□□□□ -1.15
COL12A1-207ENST00000483888 A0A0J9YWU9 116 aa7.87□□□□□ -1.15
COL12A1-207ENST00000483888 PLA2G5P39877 138 aa7.87□□□□□ -1.15
COL12A1-207ENST00000483888 FAM30AQ9NZY2 134 aa7.87□□□□□ -1.15
COL12A1-207ENST00000483888 COX7BP24311 80 aa7.87□□□□□ -1.15
COL12A1-207ENST00000483888 PTPRSQ13332 1948 aa7.87□□□□□ -1.15
COL12A1-207ENST00000483888 TRBV7-3A0A075B6L6 115 aa7.86□□□□□ -1.15
COL12A1-207ENST00000483888 EBI3Q14213 229 aa7.86□□□□□ -1.15
COL12A1-207ENST00000483888 IGKV1OR2-108A0A075B7D4 117 aa7.86□□□□□ -1.15
COL12A1-207ENST00000483888 CASC2Q6XLA1 102 aa7.86□□□□□ -1.15
COL12A1-207ENST00000483888 NAV3Q8IVL0 2385 aa7.86□□□□□ -1.15
COL12A1-207ENST00000483888 LINC01619G3V211 115 aa7.85□□□□□ -1.15
COL12A1-207ENST00000483888 LINC00308Q8TCZ7 52 aa7.85□□□□□ -1.15
COL12A1-207ENST00000483888 COL8A2P25067 703 aa7.85□□□□□ -1.15
COL12A1-207ENST00000483888 CAMK2N2Q96S95 79 aa7.85□□□□□ -1.15
COL12A1-207ENST00000483888 ZNF524Q96C55 264 aa7.85□□□□□ -1.15
COL12A1-207ENST00000483888 SIRPDQ9H106 197 aa7.85□□□□□ -1.15
COL12A1-207ENST00000483888 MBD6Q96DN6 1003 aa7.85□□□□□ -1.15
COL12A1-207ENST00000483888 U3KQK5 164 aa7.85□□□□□ -1.15
COL12A1-207ENST00000483888 CSPG4Q6UVK1 2322 aa7.85□□□□□ -1.15
COL12A1-207ENST00000483888 AJUBAQ96IF1 538 aa7.84□□□□□ -1.15
COL12A1-207ENST00000483888 IGLV2-14P01704 120 aa7.84□□□□□ -1.15
COL12A1-207ENST00000483888 ZNF22P17026 224 aaPredicted RBP7.84□□□□□ -1.15
COL12A1-207ENST00000483888 I3L2K1 104 aa7.84□□□□□ -1.15
COL12A1-207ENST00000483888 PTPRQQ9UMZ3 2332 aa7.84□□□□□ -1.15
COL12A1-207ENST00000483888 DSCAMO60469 2012 aa7.84□□□□□ -1.15
COL12A1-207ENST00000483888 MED14OSP0DP75 135 aa7.84□□□□□ -1.15
COL12A1-207ENST00000483888 GATA4P43694 442 aa7.84□□□□□ -1.15
COL12A1-207ENST00000483888 C22orf34Q6ZV56 151 aa7.84□□□□□ -1.15
COL12A1-207ENST00000483888 PRYO14603 147 aa7.84□□□□□ -1.15
COL12A1-207ENST00000483888 CEMP1Q6PRD7 247 aaPredicted RBP7.84□□□□□ -1.15
COL12A1-207ENST00000483888 C1orf53Q5VUE5 145 aa7.84□□□□□ -1.15
COL12A1-207ENST00000483888 TRBV7-6A0A0J9YX20 115 aa7.84□□□□□ -1.15
COL12A1-207ENST00000483888 PRAC2D3DTV9 90 aa7.84□□□□□ -1.15
COL12A1-207ENST00000483888 DEFB112Q30KQ8 113 aa7.84□□□□□ -1.16
COL12A1-207ENST00000483888 IGHV4-30-2A0A087WSY4 118 aa7.83□□□□□ -1.16
COL12A1-207ENST00000483888 C20orf203Q8NBC4 194 aa7.83□□□□□ -1.16
COL12A1-207ENST00000483888 CDIP1Q9H305 208 aa7.83□□□□□ -1.16
COL12A1-207ENST00000483888 NBASA2RRP1 2371 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms