RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 ANKRD26Q9UPS8 1709 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 CENPFP49454 3210 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 KIF20BQ96Q89 1820 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 BRCA2P51587 3418 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 TRAV30A0A087WSZ9 112 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 GNG7O60262 68 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 TRACP01848 142 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 SCTP09683 121 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 FGF7P21781 194 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 RPS3P23396 243 aaKnown RBP eCLIP1.64□□□□□ -2.15
MCF2-207ENST00000483690 POLR2HP52434 150 aaKnown RBP1.64□□□□□ -2.15
MCF2-207ENST00000483690 GLIPR1L1Q6UWM5 242 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 LINC00299Q6ZSB3 139 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 ZCCHC23Q6ZST2 131 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 SBSPONQ8IVN8 264 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 C4orf33Q8N1A6 199 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 NAT14Q8WUY8 206 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 PSMG3Q9BT73 122 aaPredicted RBP1.64□□□□□ -2.15
MCF2-207ENST00000483690 UNC80Q8N2C7 3258 aa1.64□□□□□ -2.15
MCF2-207ENST00000483690 KIAA0100Q14667 2235 aaKnown RBP1.63□□□□□ -2.15
MCF2-207ENST00000483690 CEP290O15078 2479 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 TMEM218A2RU14 115 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 IFITM5A6NNB3 132 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 H3BQF6 201 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 OR2H2O95918 312 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 TPT1P13693 172 aaKnown RBP1.63□□□□□ -2.15
MCF2-207ENST00000483690 RPL7P18124 248 aaKnown RBP1.63□□□□□ -2.15
MCF2-207ENST00000483690 HIST1H1AQ02539 215 aaPredicted RBP1.63□□□□□ -2.15
MCF2-207ENST00000483690 NCMAPQ5T1S8 102 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 OR5A2Q8NGI9 324 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 SNHG12Q9BXW3 62 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 LPAR5Q9H1C0 372 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 PTPRDP23468 1912 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 HTTP42858 3142 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 AFDNP55196 1824 aaKnown RBP1.63□□□□□ -2.15
MCF2-207ENST00000483690 TJP1Q07157 1748 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 MRC1P22897 1456 aa1.63□□□□□ -2.15
MCF2-207ENST00000483690 ATG2AQ2TAZ0 1938 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 C9JAW5 83 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 M0R2Z0 102 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 APODP05090 189 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 CD14P08571 375 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 GNG4P50150 75 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 RPS25P62851 125 aaKnown RBP1.62□□□□□ -2.15
MCF2-207ENST00000483690 COL5A1-AS1Q5SY13 56 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 GLYATL3Q5SZD4 288 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 CASC2Q6XLA1 102 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 TCTE3Q8IZS6 198 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 OR8I2Q8N0Y5 310 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 TEX29Q8N6K0 151 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 TCTEX1D1Q8N7M0 179 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 TMEM229BQ8NBD8 167 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 SMIM3Q9BZL3 60 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 HIGD1AQ9Y241 93 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 V9GYS6 101 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 VCANP13611 3396 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 SCN11AQ9UI33 1791 aa1.62□□□□□ -2.15
MCF2-207ENST00000483690 LAMA2P24043 3122 aaKnown RBP1.62□□□□□ -2.15
MCF2-207ENST00000483690 RANBP2P49792 3224 aaKnown RBP1.61□□□□□ -2.15
MCF2-207ENST00000483690 TRAV13-1A0A0B4J241 112 aa1.61□□□□□ -2.15
MCF2-207ENST00000483690 TRBV27A0A0K0K1C4 114 aa1.61□□□□□ -2.15
MCF2-207ENST00000483690 COPZ1P61923 177 aa1.61□□□□□ -2.15
MCF2-207ENST00000483690 CCSMST1Q4G0I0 132 aa1.61□□□□□ -2.15
MCF2-207ENST00000483690 C6orf52Q5T4I8 152 aa1.61□□□□□ -2.15
MCF2-207ENST00000483690 SNX29P2Q8IUI4 249 aa1.61□□□□□ -2.15
MCF2-207ENST00000483690 LCN9Q8WX39 176 aa1.61□□□□□ -2.15
MCF2-207ENST00000483690 CLEC2BQ92478 149 aa1.61□□□□□ -2.15
MCF2-207ENST00000483690 SCN3BQ9NY72 215 aa1.61□□□□□ -2.15
MCF2-207ENST00000483690 BOKQ9UMX3 212 aaPredicted RBP1.61□□□□□ -2.15
MCF2-207ENST00000483690 TANC2Q9HCD6 1990 aa1.61□□□□□ -2.15
MCF2-207ENST00000483690 TRPM7Q96QT4 1865 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 C3orf85A0A1B0GTC6 90 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 A0A1B0GW64 132 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 J3QR89 54 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 NCR2O95944 276 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 PAEPP09466 180 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 TRAPPC2P0DI81 140 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 TRAPPC2BP0DI82 140 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 HIST1H1DP16402 221 aaKnown RBP1.6□□□□□ -2.15
MCF2-207ENST00000483690 PP6455Q8WZ26 134 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 ZDBF2Q9HCK1 2354 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 FER1L6Q2WGJ9 1857 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 CDK5RAP2Q96SN8 1893 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 NRXN2Q9P2S2 1712 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 LAMA3Q16787 3333 aa1.6□□□□□ -2.15
MCF2-207ENST00000483690 BDP1A6H8Y1 2624 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 DMDP11532 3685 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 DNAH12Q6ZR08 3092 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 PNMA8CA0A1B0GUJ8 204 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 H3BMG7 143 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 CDC42EP2O14613 210 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 DPM2O94777 84 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 SAA1P0DJI8 122 aaPredicted RBP1.59□□□□□ -2.15
MCF2-207ENST00000483690 ETV6P41212 452 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 PYY3Q5JQD4 70 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 CLLU1Q5K131 121 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 Q5XG85 94 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 GTF2H5Q6ZYL4 71 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms