RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 TRBV10-3A0A0K0K1G6 114 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 FAM25AB3EWG3 89 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 FAM25CB3EWG5 89 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 FAM25GB3EWG6 89 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 ACYP2P14621 99 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 CBLN1P23435 193 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 UBE2D1P51668 147 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 VMO1Q7Z5L0 202 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 SPTSSBQ8NFR3 76 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 ZNF518AQ6AHZ1 1483 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 LRRC37A3O60309 1634 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 TNCP24821 2201 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 FOCADQ5VW36 1801 aa0.44□□□□□ -2.34
NSMCE4A-210ENST00000483541 PIGBOS1A0A0B4J2F0 54 aa0.44□□□□□ -2.34
NSMCE4A-210ENST00000483541 APOC4-APOC2K7ER74 178 aa0.44□□□□□ -2.34
NSMCE4A-210ENST00000483541 EDDM3BP56851 147 aa0.44□□□□□ -2.34
NSMCE4A-210ENST00000483541 SPINK6Q6UWN8 80 aa0.44□□□□□ -2.34
NSMCE4A-210ENST00000483541 SEC11CQ9BY50 192 aa0.44□□□□□ -2.34
NSMCE4A-210ENST00000483541 PROK2Q9HC23 129 aa0.44□□□□□ -2.34
NSMCE4A-210ENST00000483541 GVQW2A0A096LPI5 108 aaPredicted RBP0.43□□□□□ -2.34
NSMCE4A-210ENST00000483541 NDUFA2O43678 99 aa0.43□□□□□ -2.34
NSMCE4A-210ENST00000483541 SELENOWP63302 87 aa0.43□□□□□ -2.34
NSMCE4A-210ENST00000483541 ZNF818PQ6ZRF7 136 aa0.43□□□□□ -2.34
NSMCE4A-210ENST00000483541 MEGF8Q7Z7M0 2845 aa0.43□□□□□ -2.34
NSMCE4A-210ENST00000483541 IBTKQ9P2D0 1353 aaPredicted RBP0.43□□□□□ -2.34
NSMCE4A-210ENST00000483541 CFTRP13569 1480 aa0.42□□□□□ -2.34
NSMCE4A-210ENST00000483541 SSC5DA1L4H1 1573 aa0.42□□□□□ -2.34
NSMCE4A-210ENST00000483541 NAIPQ13075 1403 aa0.42□□□□□ -2.34
NSMCE4A-210ENST00000483541 SMIM6P0DI80 62 aa0.42□□□□□ -2.34
NSMCE4A-210ENST00000483541 DPH3Q96FX2 82 aa0.42□□□□□ -2.34
NSMCE4A-210ENST00000483541 Q96NJ1 140 aa0.42□□□□□ -2.34
NSMCE4A-210ENST00000483541 LINC00470Q9BZP3 86 aa0.42□□□□□ -2.34
NSMCE4A-210ENST00000483541 DOCK2Q92608 1830 aa0.42□□□□□ -2.34
NSMCE4A-210ENST00000483541 FRAS1Q86XX4 4008 aa0.42□□□□□ -2.34
NSMCE4A-210ENST00000483541 IFT140Q96RY7 1462 aa0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 PI4KAP42356 2102 aa0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 PATJQ8NI35 1801 aa0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 CASKIN1Q8WXD9 1431 aa0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 TRGV1A0A0A0MS02 117 aa0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 TMEM14DPA8MWL7 114 aa0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 GNG7O60262 68 aa0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 HIST1H1DP16402 221 aaKnown RBP0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 GCHFRP30047 84 aa0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 CCL8P80075 99 aa0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 ASXL3Q9C0F0 2248 aa0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 PRDM2Q13029 1718 aa0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 IFT172Q9UG01 1749 aa0.41□□□□□ -2.34
NSMCE4A-210ENST00000483541 AHCTF1Q8WYP5 2266 aa0.4□□□□□ -2.34
NSMCE4A-210ENST00000483541 TRAV1-2A0A0B4J238 106 aa0.4□□□□□ -2.35
NSMCE4A-210ENST00000483541 NMBP08949 121 aa0.4□□□□□ -2.35
NSMCE4A-210ENST00000483541 KRTAP2-3P0C7H8 128 aa0.4□□□□□ -2.35
NSMCE4A-210ENST00000483541 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
NSMCE4A-210ENST00000483541 C12orf73Q69YU5 71 aa0.4□□□□□ -2.35
NSMCE4A-210ENST00000483541 C1orf54Q8WWF1 131 aa0.4□□□□□ -2.35
NSMCE4A-210ENST00000483541 SNRNP25Q9BV90 132 aaKnown RBP0.4□□□□□ -2.35
NSMCE4A-210ENST00000483541 KRTAP2-4Q9BYR9 128 aa0.4□□□□□ -2.35
NSMCE4A-210ENST00000483541 KRTAP2-1Q9BYU5 128 aa0.4□□□□□ -2.35
NSMCE4A-210ENST00000483541 RERGLQ9H628 205 aa0.4□□□□□ -2.35
NSMCE4A-210ENST00000483541 CLPSL1A2RUU4 121 aa0.39□□□□□ -2.35
NSMCE4A-210ENST00000483541 SARNPP82979 210 aaKnown RBP0.39□□□□□ -2.35
NSMCE4A-210ENST00000483541 COX6A2Q02221 97 aa0.39□□□□□ -2.35
NSMCE4A-210ENST00000483541 Q6ZRX8 168 aa0.39□□□□□ -2.35
NSMCE4A-210ENST00000483541 NAA60Q9H7X0 242 aa0.39□□□□□ -2.35
NSMCE4A-210ENST00000483541 LINC00312Q9Y6C7 94 aa0.39□□□□□ -2.35
NSMCE4A-210ENST00000483541 GOLGA3Q08378 1498 aa0.39□□□□□ -2.35
NSMCE4A-210ENST00000483541 PXDNQ92626 1479 aa0.39□□□□□ -2.35
NSMCE4A-210ENST00000483541 DOCK1Q14185 1865 aa0.39□□□□□ -2.35
NSMCE4A-210ENST00000483541 ARAP2Q8WZ64 1704 aa0.38□□□□□ -2.35
NSMCE4A-210ENST00000483541 TRAV13-2A0A0B4J235 113 aa0.38□□□□□ -2.35
NSMCE4A-210ENST00000483541 K7EP13 123 aa0.38□□□□□ -2.35
NSMCE4A-210ENST00000483541 INSL4Q14641 139 aa0.38□□□□□ -2.35
NSMCE4A-210ENST00000483541 Q6AWC8 147 aa0.38□□□□□ -2.35
NSMCE4A-210ENST00000483541 AQP10Q96PS8 301 aa0.38□□□□□ -2.35
NSMCE4A-210ENST00000483541 WFDC6Q9BQY6 131 aa0.38□□□□□ -2.35
NSMCE4A-210ENST00000483541 AGPAT4-IT1Q9H0P7 198 aa0.38□□□□□ -2.35
NSMCE4A-210ENST00000483541 SERP1Q9Y6X1 66 aa0.38□□□□□ -2.35
NSMCE4A-210ENST00000483541 FAM208BQ5VWN6 2430 aa0.37□□□□□ -2.35
NSMCE4A-210ENST00000483541 MBD5Q9P267 1494 aa0.37□□□□□ -2.35
NSMCE4A-210ENST00000483541 TCHHQ07283 1943 aa0.37□□□□□ -2.35
NSMCE4A-210ENST00000483541 RBM3P98179 157 aaKnown RBP0.37□□□□□ -2.35
NSMCE4A-210ENST00000483541 MEIG1Q5JSS6 88 aa0.37□□□□□ -2.35
NSMCE4A-210ENST00000483541 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.37□□□□□ -2.35
NSMCE4A-210ENST00000483541 MAST4O15021 2626 aa0.37□□□□□ -2.35
NSMCE4A-210ENST00000483541 NALCNQ8IZF0 1738 aa0.36□□□□□ -2.35
NSMCE4A-210ENST00000483541 MDN1Q9NU22 5596 aa0.36□□□□□ -2.35
NSMCE4A-210ENST00000483541 MIF4GDA9UHW6 222 aaKnown RBP0.36□□□□□ -2.35
NSMCE4A-210ENST00000483541 SIX6O95475 246 aa0.36□□□□□ -2.35
NSMCE4A-210ENST00000483541 BAGE3Q86Y29 109 aa0.36□□□□□ -2.35
NSMCE4A-210ENST00000483541 UBE2DNLQ8IWF7 75 aa0.36□□□□□ -2.35
NSMCE4A-210ENST00000483541 LSM10Q969L4 123 aaKnown RBP0.36□□□□□ -2.35
NSMCE4A-210ENST00000483541 SPTBN2O15020 2390 aa0.35□□□□□ -2.35
NSMCE4A-210ENST00000483541 CUL7Q14999 1698 aa0.35□□□□□ -2.35
NSMCE4A-210ENST00000483541 SPAARA0A1B0GVQ0 90 aa0.35□□□□□ -2.35
NSMCE4A-210ENST00000483541 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
NSMCE4A-210ENST00000483541 HCG22E2RYF7 251 aa0.35□□□□□ -2.35
NSMCE4A-210ENST00000483541 FGF7P21781 194 aa0.35□□□□□ -2.35
NSMCE4A-210ENST00000483541 BTG2P78543 158 aa0.35□□□□□ -2.35
NSMCE4A-210ENST00000483541 Q8N8P6 123 aa0.35□□□□□ -2.35
NSMCE4A-210ENST00000483541 BCL9LQ86UU0 1499 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms