RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 PCLOQ9Y6V0 5065 aa11.1□□□□□ -0.63
VAMP4-204ENST00000482519 KCNIP4Q6PIL6 250 aa11.09□□□□□ -0.63
VAMP4-204ENST00000482519 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.09□□□□□ -0.63
VAMP4-204ENST00000482519 A0A087WX48 190 aa11.08□□□□□ -0.64
VAMP4-204ENST00000482519 TMEM262E9PQX1 116 aa11.08□□□□□ -0.64
VAMP4-204ENST00000482519 CDK2AP2O75956 126 aa11.08□□□□□ -0.64
VAMP4-204ENST00000482519 NTF3P20783 257 aa11.08□□□□□ -0.64
VAMP4-204ENST00000482519 LAGE3Q14657 143 aa11.08□□□□□ -0.64
VAMP4-204ENST00000482519 NIT1Q86X76 327 aa11.08□□□□□ -0.64
VAMP4-204ENST00000482519 LRP1BQ9NZR2 4599 aa11.08□□□□□ -0.64
VAMP4-204ENST00000482519 TRAV8-3A0A0A6YYJ7 113 aa11.07□□□□□ -0.64
VAMP4-204ENST00000482519 TWIST1Q15672 202 aa11.07□□□□□ -0.64
VAMP4-204ENST00000482519 TM2D2Q9BX73 214 aa11.07□□□□□ -0.64
VAMP4-204ENST00000482519 KLK12Q9UKR0 248 aa11.07□□□□□ -0.64
VAMP4-204ENST00000482519 TRBV6-8A0A0A6YYG3 113 aa11.06□□□□□ -0.64
VAMP4-204ENST00000482519 TRGC1P0CF51 173 aa11.06□□□□□ -0.64
VAMP4-204ENST00000482519 SUMO4Q6EEV6 95 aa11.06□□□□□ -0.64
VAMP4-204ENST00000482519 CDPF1Q6NVV7 123 aa11.06□□□□□ -0.64
VAMP4-204ENST00000482519 LRCOL1A6NCL2 159 aa11.05□□□□□ -0.64
VAMP4-204ENST00000482519 H7C1H1 209 aa11.05□□□□□ -0.64
VAMP4-204ENST00000482519 M0QY20 66 aa11.05□□□□□ -0.64
VAMP4-204ENST00000482519 GATCO43716 136 aaKnown RBP11.05□□□□□ -0.64
VAMP4-204ENST00000482519 CTRLP40313 264 aa11.05□□□□□ -0.64
VAMP4-204ENST00000482519 FAM210AQ96ND0 272 aa11.05□□□□□ -0.64
VAMP4-204ENST00000482519 SMIM7Q9BQ49 75 aa11.05□□□□□ -0.64
VAMP4-204ENST00000482519 CHCHD5Q9BSY4 110 aa11.05□□□□□ -0.64
VAMP4-204ENST00000482519 DNAH5Q8TE73 4624 aa11.05□□□□□ -0.64
VAMP4-204ENST00000482519 MAPKAPK5-AS1Q8N8E1 139 aa11.04□□□□□ -0.64
VAMP4-204ENST00000482519 DNAJC30Q96LL9 226 aa11.04□□□□□ -0.64
VAMP4-204ENST00000482519 DPH3P1Q9H4G8 78 aa11.04□□□□□ -0.64
VAMP4-204ENST00000482519 ZNF727A8MUV8 499 aa11.03□□□□□ -0.64
VAMP4-204ENST00000482519 ELOBQ15370 118 aa11.03□□□□□ -0.64
VAMP4-204ENST00000482519 WDR73Q6P4I2 378 aa11.03□□□□□ -0.64
VAMP4-204ENST00000482519 GTSF1Q8WW33 167 aa11.03□□□□□ -0.64
VAMP4-204ENST00000482519 UBE2WQ96B02 151 aa11.03□□□□□ -0.64
VAMP4-204ENST00000482519 IGKV2D-24A0A075B6R9 120 aa11.02□□□□□ -0.65
VAMP4-204ENST00000482519 IGLV5-52A0A0A0MRZ9 124 aa11.02□□□□□ -0.65
VAMP4-204ENST00000482519 LECT2O14960 151 aa11.02□□□□□ -0.65
VAMP4-204ENST00000482519 SRP19P09132 144 aaKnown RBP11.02□□□□□ -0.65
VAMP4-204ENST00000482519 Q8N814 137 aa11.02□□□□□ -0.65
VAMP4-204ENST00000482519 C15orf54Q8N8G6 183 aa11.02□□□□□ -0.65
VAMP4-204ENST00000482519 RMI2Q96E14 147 aa11.02□□□□□ -0.65
VAMP4-204ENST00000482519 PGLYRP4Q96LB8 373 aa11.02□□□□□ -0.65
VAMP4-204ENST00000482519 HSPG2P98160 4391 aa11.01□□□□□ -0.65
VAMP4-204ENST00000482519 A8MWL6 223 aa11.01□□□□□ -0.65
VAMP4-204ENST00000482519 GCSHP23434 173 aa11.01□□□□□ -0.65
VAMP4-204ENST00000482519 MPV17L2Q567V2 206 aa11.01□□□□□ -0.65
VAMP4-204ENST00000482519 TMEM97Q5BJF2 176 aa11.01□□□□□ -0.65
VAMP4-204ENST00000482519 RASL11AQ6T310 242 aa11.01□□□□□ -0.65
VAMP4-204ENST00000482519 NTM-AS1Q6ZSK4 140 aa11.01□□□□□ -0.65
VAMP4-204ENST00000482519 FAM231DQ6ZW35 169 aa11.01□□□□□ -0.65
VAMP4-204ENST00000482519 CHCHD7Q9BUK0 85 aa11.01□□□□□ -0.65
VAMP4-204ENST00000482519 TRBV25-1A0A075B6N4 114 aa11□□□□□ -0.65
VAMP4-204ENST00000482519 KRTAP10-1P60331 282 aa11□□□□□ -0.65
VAMP4-204ENST00000482519 GAGE6Q13070 117 aa11□□□□□ -0.65
VAMP4-204ENST00000482519 SMIM15Q7Z3B0 74 aa11□□□□□ -0.65
VAMP4-204ENST00000482519 LINC01551Q86U37 167 aa11□□□□□ -0.65
VAMP4-204ENST00000482519 DEFB104AQ8WTQ1 72 aa11□□□□□ -0.65
VAMP4-204ENST00000482519 BAALCQ8WXS3 180 aa11□□□□□ -0.65
VAMP4-204ENST00000482519 CNFNQ9BYD5 112 aa11□□□□□ -0.65
VAMP4-204ENST00000482519 COX11Q9Y6N1 276 aa11□□□□□ -0.65
VAMP4-204ENST00000482519 ANGP03950 147 aaKnown RBP10.99□□□□□ -0.65
VAMP4-204ENST00000482519 WFDC2Q14508 124 aa10.99□□□□□ -0.65
VAMP4-204ENST00000482519 TEX261Q6UWH6 196 aa10.99□□□□□ -0.65
VAMP4-204ENST00000482519 Q8N976 141 aa10.99□□□□□ -0.65
VAMP4-204ENST00000482519 NIT2Q9NQR4 276 aa10.99□□□□□ -0.65
VAMP4-204ENST00000482519 APOBP04114 4563 aaKnown RBP10.98□□□□□ -0.65
VAMP4-204ENST00000482519 TRAV26-2A0A0B4J265 109 aa10.98□□□□□ -0.65
VAMP4-204ENST00000482519 CRPP02741 224 aa10.98□□□□□ -0.65
VAMP4-204ENST00000482519 FOXA3P55318 350 aaPredicted RBP10.98□□□□□ -0.65
VAMP4-204ENST00000482519 PKIAP61925 76 aa10.98□□□□□ -0.65
VAMP4-204ENST00000482519 ATRAIDQ6UW56 229 aa10.98□□□□□ -0.65
VAMP4-204ENST00000482519 NTN5Q8WTR8 489 aaPredicted RBP10.98□□□□□ -0.65
VAMP4-204ENST00000482519 BORCS7Q96B45 105 aa10.98□□□□□ -0.65
VAMP4-204ENST00000482519 KRTAP4-5Q9BYR2 181 aa10.98□□□□□ -0.65
VAMP4-204ENST00000482519 ABCA13Q86UQ4 5058 aa10.97□□□□□ -0.65
VAMP4-204ENST00000482519 IGHV1-24A0A0C4DH33 117 aa10.97□□□□□ -0.65
VAMP4-204ENST00000482519 NDUFS6O75380 124 aaKnown RBP10.97□□□□□ -0.65
VAMP4-204ENST00000482519 Q0VG73 95 aa10.97□□□□□ -0.65
VAMP4-204ENST00000482519 RBX1P62877 108 aa10.96□□□□□ -0.65
VAMP4-204ENST00000482519 IQCJQ1A5X6 159 aa10.96□□□□□ -0.65
VAMP4-204ENST00000482519 TMEM241Q24JQ0 296 aa10.96□□□□□ -0.65
VAMP4-204ENST00000482519 CT83Q5H943 113 aa10.96□□□□□ -0.65
VAMP4-204ENST00000482519 ENHOQ6UWT2 76 aa10.96□□□□□ -0.65
VAMP4-204ENST00000482519 GATD1Q8NB37 220 aa10.96□□□□□ -0.65
VAMP4-204ENST00000482519 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.95□□□□□ -0.66
VAMP4-204ENST00000482519 C9JQL5 133 aa10.95□□□□□ -0.66
VAMP4-204ENST00000482519 SRSF3P84103 164 aaKnown RBP10.95□□□□□ -0.66
VAMP4-204ENST00000482519 PEA15Q15121 130 aa10.95□□□□□ -0.66
VAMP4-204ENST00000482519 CLPSL2Q6UWE3 100 aa10.95□□□□□ -0.66
VAMP4-204ENST00000482519 TSKUQ8WUA8 353 aa10.95□□□□□ -0.66
VAMP4-204ENST00000482519 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
VAMP4-204ENST00000482519 OSTCQ9NRP0 149 aa10.95□□□□□ -0.66
VAMP4-204ENST00000482519 HIGD1CA8MV81 97 aa10.94□□□□□ -0.66
VAMP4-204ENST00000482519 ADIRFQ15847 76 aa10.94□□□□□ -0.66
VAMP4-204ENST00000482519 FAM74A3Q4VXF1 159 aa10.94□□□□□ -0.66
VAMP4-204ENST00000482519 Q8N1X5 172 aa10.94□□□□□ -0.66
VAMP4-204ENST00000482519 LINC00269Q8N2A0 174 aa10.94□□□□□ -0.66
VAMP4-204ENST00000482519 RPL39LQ96EH5 51 aaKnown RBP10.94□□□□□ -0.66
VAMP4-204ENST00000482519 TMEM243Q9BU79 118 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms