RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 FER1L6-AS1Q8NA97 138 aa6.92□□□□□ -1.3
CPSF4-212ENST00000482251 OR10G8Q8NGN5 311 aa6.92□□□□□ -1.3
CPSF4-212ENST00000482251 DAZAP1Q96EP5 407 aaKnown RBP6.92□□□□□ -1.3
CPSF4-212ENST00000482251 SSBP4Q9BWG4 385 aaPredicted RBP6.92□□□□□ -1.3
CPSF4-212ENST00000482251 TRBV6-8A0A0A6YYG3 113 aa6.91□□□□□ -1.3
CPSF4-212ENST00000482251 IFNA1P01562 189 aa6.91□□□□□ -1.3
CPSF4-212ENST00000482251 C1QBP02746 253 aa6.91□□□□□ -1.3
CPSF4-212ENST00000482251 BCL2P10415 239 aa6.91□□□□□ -1.3
CPSF4-212ENST00000482251 CLPSL2Q6UWE3 100 aa6.91□□□□□ -1.3
CPSF4-212ENST00000482251 RMI2Q96E14 147 aa6.91□□□□□ -1.3
CPSF4-212ENST00000482251 CHCHD5Q9BSY4 110 aa6.91□□□□□ -1.3
CPSF4-212ENST00000482251 TMEM70Q9BUB7 260 aa6.91□□□□□ -1.3
CPSF4-212ENST00000482251 MED9Q9NWA0 146 aa6.91□□□□□ -1.3
CPSF4-212ENST00000482251 C19orf71A6NCJ1 209 aa6.9□□□□□ -1.3
CPSF4-212ENST00000482251 PDE6DO43924 150 aa6.9□□□□□ -1.3
CPSF4-212ENST00000482251 P01737 135 aa6.9□□□□□ -1.3
CPSF4-212ENST00000482251 CRPP02741 224 aa6.9□□□□□ -1.3
CPSF4-212ENST00000482251 ANGP03950 147 aaKnown RBP6.9□□□□□ -1.3
CPSF4-212ENST00000482251 IGLC6P0CF74 106 aa6.9□□□□□ -1.3
CPSF4-212ENST00000482251 INAFM2P0DMQ5 153 aa6.9□□□□□ -1.3
CPSF4-212ENST00000482251 SLC51BQ86UW2 128 aa6.9□□□□□ -1.3
CPSF4-212ENST00000482251 Q8N976 141 aa6.9□□□□□ -1.3
CPSF4-212ENST00000482251 DEFB104AQ8WTQ1 72 aa6.9□□□□□ -1.3
CPSF4-212ENST00000482251 KIF25-AS1Q9Y6Z4 181 aa6.9□□□□□ -1.3
CPSF4-212ENST00000482251 HLA-DQA1P01909 254 aa6.89□□□□□ -1.31
CPSF4-212ENST00000482251 GAGE6Q13070 117 aa6.89□□□□□ -1.31
CPSF4-212ENST00000482251 SUMO4Q6EEV6 95 aa6.89□□□□□ -1.31
CPSF4-212ENST00000482251 NTM-AS1Q6ZSK4 140 aa6.89□□□□□ -1.31
CPSF4-212ENST00000482251 AKAP14Q86UN6 197 aa6.89□□□□□ -1.31
CPSF4-212ENST00000482251 C9orf62Q8N4C0 152 aa6.89□□□□□ -1.31
CPSF4-212ENST00000482251 CHCHD7Q9BUK0 85 aa6.89□□□□□ -1.31
CPSF4-212ENST00000482251 C1orf43Q9BWL3 253 aa6.89□□□□□ -1.31
CPSF4-212ENST00000482251 COX11Q9Y6N1 276 aa6.89□□□□□ -1.31
CPSF4-212ENST00000482251 RPS20P60866 119 aaKnown RBP6.88□□□□□ -1.31
CPSF4-212ENST00000482251 ELOBQ15370 118 aa6.88□□□□□ -1.31
CPSF4-212ENST00000482251 ENHOQ6UWT2 76 aa6.88□□□□□ -1.31
CPSF4-212ENST00000482251 ALKAL2Q6UX46 152 aa6.88□□□□□ -1.31
CPSF4-212ENST00000482251 Q6ZNX1 250 aa6.88□□□□□ -1.31
CPSF4-212ENST00000482251 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.88□□□□□ -1.31
CPSF4-212ENST00000482251 VAX2Q9UIW0 290 aa6.88□□□□□ -1.31
CPSF4-212ENST00000482251 XKRY2A2RUG3 117 aa6.87□□□□□ -1.31
CPSF4-212ENST00000482251 FAM229AH3BQW9 127 aa6.87□□□□□ -1.31
CPSF4-212ENST00000482251 M0QY20 66 aa6.87□□□□□ -1.31
CPSF4-212ENST00000482251 NKX2-5P52952 324 aaPredicted RBP6.87□□□□□ -1.31
CPSF4-212ENST00000482251 CACNG7P62955 275 aa6.87□□□□□ -1.31
CPSF4-212ENST00000482251 Q0VG73 95 aa6.87□□□□□ -1.31
CPSF4-212ENST00000482251 ATRAIDQ6UW56 229 aa6.87□□□□□ -1.31
CPSF4-212ENST00000482251 LYZL1Q6UWQ5 148 aa6.87□□□□□ -1.31
CPSF4-212ENST00000482251 SMIM12Q96EX1 92 aa6.87□□□□□ -1.31
CPSF4-212ENST00000482251 RNASE7Q9H1E1 156 aaKnown RBP6.87□□□□□ -1.31
CPSF4-212ENST00000482251 DNAH8Q96JB1 4490 aa6.86□□□□□ -1.31
CPSF4-212ENST00000482251 TRBV25-1A0A075B6N4 114 aa6.86□□□□□ -1.31
CPSF4-212ENST00000482251 K7EN84 100 aa6.86□□□□□ -1.31
CPSF4-212ENST00000482251 CEBPGP53567 150 aa6.86□□□□□ -1.31
CPSF4-212ENST00000482251 RBX1P62877 108 aa6.86□□□□□ -1.31
CPSF4-212ENST00000482251 NUDT10Q8NFP7 164 aa6.86□□□□□ -1.31
CPSF4-212ENST00000482251 NUDT11Q96G61 164 aa6.86□□□□□ -1.31
CPSF4-212ENST00000482251 RPP21Q9H633 154 aaKnown RBP6.86□□□□□ -1.31
CPSF4-212ENST00000482251 HERC1Q15751 4861 aa6.85□□□□□ -1.31
CPSF4-212ENST00000482251 IGHV1-24A0A0C4DH33 117 aa6.85□□□□□ -1.31
CPSF4-212ENST00000482251 H7C1H1 209 aa6.85□□□□□ -1.31
CPSF4-212ENST00000482251 TRGC1P0CF51 173 aa6.85□□□□□ -1.31
CPSF4-212ENST00000482251 NTF3P20783 257 aa6.85□□□□□ -1.31
CPSF4-212ENST00000482251 CTRLP40313 264 aa6.85□□□□□ -1.31
CPSF4-212ENST00000482251 Q6ZSA8 131 aa6.85□□□□□ -1.31
CPSF4-212ENST00000482251 SCXQ7RTU7 201 aa6.85□□□□□ -1.31
CPSF4-212ENST00000482251 LINC00269Q8N2A0 174 aa6.85□□□□□ -1.31
CPSF4-212ENST00000482251 DPH3P1Q9H4G8 78 aa6.85□□□□□ -1.31
CPSF4-212ENST00000482251 BIN3Q9NQY0 253 aa6.85□□□□□ -1.31
CPSF4-212ENST00000482251 VPS13BQ7Z7G8 4022 aa6.85□□□□□ -1.31
CPSF4-212ENST00000482251 DMBT1Q9UGM3 2413 aaPredicted RBP6.84□□□□□ -1.31
CPSF4-212ENST00000482251 IGLV10-54A0A075B6I4 117 aa6.84□□□□□ -1.31
CPSF4-212ENST00000482251 TRAV26-2A0A0B4J265 109 aa6.84□□□□□ -1.31
CPSF4-212ENST00000482251 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
CPSF4-212ENST00000482251 F2Z2F3 143 aa6.84□□□□□ -1.31
CPSF4-212ENST00000482251 PKIAP61925 76 aa6.84□□□□□ -1.31
CPSF4-212ENST00000482251 TWIST1Q15672 202 aa6.84□□□□□ -1.31
CPSF4-212ENST00000482251 TMEM97Q5BJF2 176 aa6.84□□□□□ -1.31
CPSF4-212ENST00000482251 RASL11AQ6T310 242 aa6.84□□□□□ -1.31
CPSF4-212ENST00000482251 LINC00528Q8N1L1 170 aa6.84□□□□□ -1.31
CPSF4-212ENST00000482251 OCC1Q8TAD7 63 aa6.84□□□□□ -1.31
CPSF4-212ENST00000482251 FLG2Q5D862 2391 aaPredicted RBP6.83□□□□□ -1.32
CPSF4-212ENST00000482251 TAGLN2P37802 199 aaKnown RBP6.83□□□□□ -1.32
CPSF4-212ENST00000482251 MIAQ16674 131 aa6.83□□□□□ -1.32
CPSF4-212ENST00000482251 IQCJQ1A5X6 159 aa6.83□□□□□ -1.32
CPSF4-212ENST00000482251 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
CPSF4-212ENST00000482251 FOXA3P55318 350 aaPredicted RBP6.82□□□□□ -1.32
CPSF4-212ENST00000482251 C14orf177Q52M58 125 aa6.82□□□□□ -1.32
CPSF4-212ENST00000482251 C20orf203Q8NBC4 194 aa6.82□□□□□ -1.32
CPSF4-212ENST00000482251 GTSF1Q8WW33 167 aa6.82□□□□□ -1.32
CPSF4-212ENST00000482251 RPL39LQ96EH5 51 aaKnown RBP6.82□□□□□ -1.32
CPSF4-212ENST00000482251 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
CPSF4-212ENST00000482251 GFRA4Q9GZZ7 299 aa6.82□□□□□ -1.32
CPSF4-212ENST00000482251 PRR34Q9NV39 138 aa6.82□□□□□ -1.32
CPSF4-212ENST00000482251 IGLV4-60A0A075B6I1 120 aa6.81□□□□□ -1.32
CPSF4-212ENST00000482251 UBE2L6O14933 153 aa6.81□□□□□ -1.32
CPSF4-212ENST00000482251 PRSS1P07477 247 aa6.81□□□□□ -1.32
CPSF4-212ENST00000482251 AMTP48728 403 aa6.81□□□□□ -1.32
CPSF4-212ENST00000482251 BLOC1S1P78537 153 aa6.81□□□□□ -1.32
CPSF4-212ENST00000482251 REG3AQ06141 175 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms