RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 NRXN1Q9ULB1 1477 aa2.53□□□□□ -2
VPS41-212ENST00000482217 BAZ2BQ9UIF8 2168 aaKnown RBP2.53□□□□□ -2
VPS41-212ENST00000482217 FREM3P0C091 2139 aa2.53□□□□□ -2
VPS41-212ENST00000482217 IGLV2-18A0A075B6J9 118 aa2.53□□□□□ -2
VPS41-212ENST00000482217 TRAV13-2A0A0B4J235 113 aa2.53□□□□□ -2
VPS41-212ENST00000482217 UMAD1C9J7I0 102 aa2.53□□□□□ -2
VPS41-212ENST00000482217 ZNF861PO60384 105 aa2.53□□□□□ -2
VPS41-212ENST00000482217 SFTA3P0C7M3 94 aa2.53□□□□□ -2
VPS41-212ENST00000482217 DSCR4P56555 118 aaPredicted RBP2.53□□□□□ -2
VPS41-212ENST00000482217 MOBPQ13875 183 aa2.53□□□□□ -2
VPS41-212ENST00000482217 UBE2SQ16763 222 aa2.53□□□□□ -2
VPS41-212ENST00000482217 KRTAP25-1Q3LHN0 102 aa2.53□□□□□ -2
VPS41-212ENST00000482217 RPL7L1Q6DKI1 246 aaKnown RBP2.53□□□□□ -2
VPS41-212ENST00000482217 C14orf132Q9NPU4 83 aa2.53□□□□□ -2
VPS41-212ENST00000482217 ARFGEF1Q9Y6D6 1849 aa2.53□□□□□ -2
VPS41-212ENST00000482217 ZGRF1Q86YA3 2104 aa2.53□□□□□ -2.01
VPS41-212ENST00000482217 TUBGCP6Q96RT7 1819 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 CACNA1DQ01668 2161 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 A0A1B0GU33 70 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 TCRBV4S1A1TA0A5B7 111 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 E7EUB6 86 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 IGLV7-43P04211 117 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 KRTAP1-4P0C5Y4 121 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 SFTA2Q6UW10 78 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 Q6ZS52 159 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 ZNF826PQ6ZT77 177 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 MANBALQ9NQG1 85 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 KLK12Q9UKR0 248 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 KIAA0556O60303 1618 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 GLI2P10070 1586 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 MEGF6O75095 1541 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 CLASP1Q7Z460 1538 aa2.52□□□□□ -2.01
VPS41-212ENST00000482217 RP1P56715 2156 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 PRR14LQ5THK1 2151 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 IGLV3-16A0A075B6K0 115 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 A0A087WSZ3 146 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 TRBV10-3A0A0K0K1G6 114 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 TEX49A0A1B0GTD5 131 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 KANTRA0A1W2PQU2 76 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 F2Z2F3 143 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 ST20-AS1Q8NBB2 130 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 LINC01600Q96MT4 127 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 CDC42SE1Q9NRR8 79 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 S4R3C0 116 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 UNC13BO14795 1591 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 C1orf167Q5SNV9 1468 aa2.51□□□□□ -2.01
VPS41-212ENST00000482217 CUL9Q8IWT3 2517 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 RNF17Q9BXT8 1623 aaKnown RBP2.5□□□□□ -2.01
VPS41-212ENST00000482217 ERCC6L2Q5T890 1561 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 AFDNP55196 1824 aaKnown RBP2.5□□□□□ -2.01
VPS41-212ENST00000482217 ODF3BA8MYP8 253 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 NDUFC1O43677 76 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 SMIM13P0DJ93 91 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 SNRPFP62306 86 aaKnown RBP2.5□□□□□ -2.01
VPS41-212ENST00000482217 ZNF791Q3KP31 576 aaPredicted RBP2.5□□□□□ -2.01
VPS41-212ENST00000482217 Q5VV11 94 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 UBALD1Q8TB05 177 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 ABCC1P33527 1531 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 NEXMIFQ5QGS0 1516 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 ASXL1Q8IXJ9 1541 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 CFAP43Q8NDM7 1665 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 SPTBP11277 2137 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 PIK3C2BO00750 1634 aa2.5□□□□□ -2.01
VPS41-212ENST00000482217 KIAA0100Q14667 2235 aaKnown RBP2.49□□□□□ -2.01
VPS41-212ENST00000482217 LAMB2P55268 1798 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 IGLV10-54A0A075B6I4 117 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 TRBV7-1A0A0A6YYK4 115 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 TRAV10A0A0B4J240 114 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 TRAV22A0A0B4J277 110 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 CXorf51AA0A1B0GTR3 108 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 A6NIN4 97 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 C10orf142B7Z368 130 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 IGLV1-47P01700 117 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 CXCL8P10145 99 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 MIFP14174 115 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 UBE2D3P61077 147 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 UBE2D2P62837 147 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 ZNF56Q15929 161 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 LINC00483Q53H64 154 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 VMO1Q7Z5L0 202 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 C9orf163Q8N9P6 203 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 CYP4F30PQ9H0H9 118 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 PREX1Q8TCU6 1659 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 GBF1Q92538 1859 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 LAMC1P11047 1609 aa2.49□□□□□ -2.01
VPS41-212ENST00000482217 KCPQ6ZWJ8 1503 aa2.48□□□□□ -2.01
VPS41-212ENST00000482217 PIGBOS1A0A0B4J2F0 54 aa2.48□□□□□ -2.01
VPS41-212ENST00000482217 KPRPQ5T749 579 aaPredicted RBP2.48□□□□□ -2.01
VPS41-212ENST00000482217 CLECL1Q8IZS7 167 aa2.48□□□□□ -2.01
VPS41-212ENST00000482217 Q8N6K4 173 aa2.48□□□□□ -2.01
VPS41-212ENST00000482217 KLF14Q8TD94 323 aaPredicted RBP2.48□□□□□ -2.01
VPS41-212ENST00000482217 SCRT1Q9BWW7 348 aa2.48□□□□□ -2.01
VPS41-212ENST00000482217 EHBP1L1Q8N3D4 1523 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 LRRC7Q96NW7 1537 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 CR1P17927 2039 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 LRRC9Q6ZRR7 1453 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 MDC1Q14676 2089 aaKnown RBP2.47□□□□□ -2.01
VPS41-212ENST00000482217 IGHV3-64A0A075B6Q5 118 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 A0A0J9YX75 114 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 ERC2-IT1O76042 136 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms