RNA–Protein interactions for RNA: ENST00000481788.1

RBM28-205, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-205	ENST00000481788		Q0VG73	95 aa		4.12	□□□□□ -1.75
RBM28-205	ENST00000481788	RAB31	Q13636	194 aa		4.12	□□□□□ -1.75
RBM28-205	ENST00000481788	ALKAL2	Q6UX46	152 aa		4.12	□□□□□ -1.75
RBM28-205	ENST00000481788	ZFP2	Q6ZN57	461 aa		4.12	□□□□□ -1.75
RBM28-205	ENST00000481788	MIR17HG	Q75NE6	70 aa		4.12	□□□□□ -1.75
RBM28-205	ENST00000481788	STOML3	Q8TAV4	291 aa		4.12	□□□□□ -1.75
RBM28-205	ENST00000481788	SMIM3	Q9BZL3	60 aa		4.12	□□□□□ -1.75
RBM28-205	ENST00000481788	LYRM2	Q9NU23	88 aa	Predicted RBP	4.12	□□□□□ -1.75
RBM28-205	ENST00000481788	IGLV5-37	A0A075B6J1	123 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	TRAV21	A0A0B4J279	112 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	MUC21	A0A0G2JKD1	596 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	IGSF23	A1L1A6	192 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	FAM24A	A6NFZ4	105 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788		F6UZH7	168 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	CST7	O76096	145 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	ZNF80	P51504	273 aa	Predicted RBP	4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	BAX	Q07812	192 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	CLLU1	Q5K131	121 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	RPL7L1	Q6DKI1	246 aa	Known RBP	4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	SPINK6	Q6UWN8	80 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	OR10G7	Q8NGN6	311 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	SH3BGRL3	Q9H299	93 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	JPT2	Q9H910	190 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	SDF2L1	Q9HCN8	221 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	PRR34	Q9NV39	138 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	UQCC1	Q9NVA1	299 aa		4.11	□□□□□ -1.75
RBM28-205	ENST00000481788	MUC17	Q685J3	4493 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	UBE2L5P	A0A1B0GUS4	154 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	SULT1A1	P50225	295 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	KRTAP10-7	P60409	375 aa	Predicted RBP	4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	RAN	P62826	216 aa	Known RBP	4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	HBG1	P69891	147 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	HBG2	P69892	147 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	ELOB	Q15370	118 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	MPV17L2	Q567V2	206 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	FAM74A1	Q5RGS3	127 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	EIF5AL1	Q6IS14	154 aa	Known RBP	4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	SLC7A5P1	Q8MH63	180 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	TMEM252	Q8N6L7	170 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	TMEM75	Q8N9X5	138 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	OR5C1	Q8NGR4	320 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	KCNS1	Q96KK3	526 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	ATP5S	Q99766	215 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	DPH3P1	Q9H4G8	78 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	CYTL1	Q9NRR1	136 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788	CRCT1	Q9UGL9	99 aa		4.1	□□□□□ -1.75
RBM28-205	ENST00000481788		A0A087WX48	190 aa		4.09	□□□□□ -1.75
RBM28-205	ENST00000481788		A0A0U1RQV1	116 aa		4.09	□□□□□ -1.75
RBM28-205	ENST00000481788	HLA-DQA1	P01909	254 aa		4.09	□□□□□ -1.75
RBM28-205	ENST00000481788	COMMD7	Q86VX2	200 aa		4.09	□□□□□ -1.75
RBM28-205	ENST00000481788	NPCDR1	Q9BY65	106 aa		4.09	□□□□□ -1.75
RBM28-205	ENST00000481788	WFDC1	Q9HC57	220 aa		4.09	□□□□□ -1.75
RBM28-205	ENST00000481788	VAX2	Q9UIW0	290 aa		4.09	□□□□□ -1.75
RBM28-205	ENST00000481788	URGCP-MRPS24	S4R325	110 aa		4.09	□□□□□ -1.75
RBM28-205	ENST00000481788	IGHV3-64	A0A075B6Q5	118 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	IGKV3D-20	A0A0C4DH25	116 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	LINC00862	A6NCI5	91 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788		A8MWV9	139 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	FGF7	P21781	194 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	S100A1	P23297	94 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	CSN1S1	P47710	185 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	FGF8	P55075	233 aa	Predicted RBP	4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	UBE2D3	P61077	147 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	UBE2D2	P62837	147 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	MIA	Q16674	131 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	ATP6V1F	Q16864	119 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	REG3G	Q6UW15	175 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	C15orf54	Q8N8G6	183 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	NEXN-AS1	Q8NBZ9	246 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	SCGB1C1	Q8TD33	95 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	C7orf33	Q8WU49	177 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	TREM1	Q9NP99	234 aa		4.08	□□□□□ -1.76
RBM28-205	ENST00000481788	TRBV6-8	A0A0A6YYG3	113 aa		4.07	□□□□□ -1.76
RBM28-205	ENST00000481788	ATP6V0C	P27449	155 aa		4.07	□□□□□ -1.76
RBM28-205	ENST00000481788	SULT1A2	P50226	295 aa		4.07	□□□□□ -1.76
RBM28-205	ENST00000481788	RAB5C	P51148	216 aa		4.07	□□□□□ -1.76
RBM28-205	ENST00000481788	GOLT1A	Q6ZVE7	132 aa		4.07	□□□□□ -1.76
RBM28-205	ENST00000481788	ARL6IP6	Q8N6S5	226 aa		4.07	□□□□□ -1.76
RBM28-205	ENST00000481788	OR10G8	Q8NGN5	311 aa		4.07	□□□□□ -1.76
RBM28-205	ENST00000481788	MED9	Q9NWA0	146 aa		4.07	□□□□□ -1.76
RBM28-205	ENST00000481788	PGP	A6NDG6	321 aa		4.06	□□□□□ -1.76
RBM28-205	ENST00000481788	UMAD1	C9J7I0	102 aa		4.06	□□□□□ -1.76
RBM28-205	ENST00000481788	TEX46	H3BTG2	121 aa		4.06	□□□□□ -1.76
RBM28-205	ENST00000481788	UBE2L3	P68036	154 aa	Known RBP	4.06	□□□□□ -1.76
RBM28-205	ENST00000481788	AKR1C8P	Q5T2L2	129 aa		4.06	□□□□□ -1.76
RBM28-205	ENST00000481788	NTM-AS1	Q6ZSK4	140 aa		4.06	□□□□□ -1.76
RBM28-205	ENST00000481788	OR2G3	Q8NGZ4	309 aa		4.06	□□□□□ -1.76
RBM28-205	ENST00000481788	FAM213B	Q8TBF2	198 aa		4.06	□□□□□ -1.76
RBM28-205	ENST00000481788	GTSF1	Q8WW33	167 aa		4.06	□□□□□ -1.76
RBM28-205	ENST00000481788	PSMG3	Q9BT73	122 aa	Predicted RBP	4.06	□□□□□ -1.76
RBM28-205	ENST00000481788	OTOR	Q9NRC9	128 aa		4.06	□□□□□ -1.76
RBM28-205	ENST00000481788	TRBV10-1	A0A0K0K1A3	114 aa		4.05	□□□□□ -1.76
RBM28-205	ENST00000481788	hDV102S1	A0JD36	115 aa		4.05	□□□□□ -1.76
RBM28-205	ENST00000481788	C17orf112	F2Z3M2	114 aa		4.05	□□□□□ -1.76
RBM28-205	ENST00000481788	OR7C2	O60412	319 aa		4.05	□□□□□ -1.76
RBM28-205	ENST00000481788	EIF3G	O75821	320 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
RBM28-205	ENST00000481788	GCG	P01275	180 aa		4.05	□□□□□ -1.76
RBM28-205	ENST00000481788	CRP	P02741	224 aa		4.05	□□□□□ -1.76
RBM28-205	ENST00000481788	ANG	P03950	147 aa	Known RBP	4.05	□□□□□ -1.76
RBM28-205	ENST00000481788	RAB2A	P61019	212 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms