RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 TWIST1Q15672 202 aa12.61□□□□□ -0.39
SH3D21-203ENST00000480549 CNFNQ9BYD5 112 aa12.61□□□□□ -0.39
SH3D21-203ENST00000480549 LENEPQ9Y5L5 61 aa12.61□□□□□ -0.39
SH3D21-203ENST00000480549 MRPL35Q9NZE8 188 aaKnown RBP12.6□□□□□ -0.39
SH3D21-203ENST00000480549 C5orf47Q569G3 176 aa12.6□□□□□ -0.39
SH3D21-203ENST00000480549 UBE2E2Q96LR5 201 aa12.6□□□□□ -0.39
SH3D21-203ENST00000480549 LINC00477Q96M19 166 aa12.6□□□□□ -0.39
SH3D21-203ENST00000480549 PSMG4Q5JS54 123 aa12.59□□□□□ -0.39
SH3D21-203ENST00000480549 IGHV4OR15-8A0A075B7B6 117 aa12.59□□□□□ -0.39
SH3D21-203ENST00000480549 A0A087WW49 117 aa12.59□□□□□ -0.39
SH3D21-203ENST00000480549 TCL1BO95988 128 aa12.59□□□□□ -0.39
SH3D21-203ENST00000480549 HLA-DRB4P13762 266 aa12.59□□□□□ -0.39
SH3D21-203ENST00000480549 DCANP1Q8TF63 244 aa12.59□□□□□ -0.39
SH3D21-203ENST00000480549 FAM19A4Q96LR4 140 aa12.59□□□□□ -0.39
SH3D21-203ENST00000480549 HLA-DRB4X5D2U9 266 aa12.59□□□□□ -0.39
SH3D21-203ENST00000480549 ZFAND2AQ8N6M9 145 aa12.58□□□□□ -0.4
SH3D21-203ENST00000480549 OR10J6PQ8NGY7 276 aa12.58□□□□□ -0.4
SH3D21-203ENST00000480549 MYMXA0A1B0GTQ4 84 aa12.58□□□□□ -0.4
SH3D21-203ENST00000480549 F6UB75 175 aa12.58□□□□□ -0.4
SH3D21-203ENST00000480549 U3KQK5 164 aa12.58□□□□□ -0.4
SH3D21-203ENST00000480549 KRTAP1-1Q07627 177 aa12.57□□□□□ -0.4
SH3D21-203ENST00000480549 MSRB1Q9NZV6 116 aa12.57□□□□□ -0.4
SH3D21-203ENST00000480549 LOC107984640A0A0U1RRK4 108 aa12.57□□□□□ -0.4
SH3D21-203ENST00000480549 LGALS9O00182 355 aa12.56□□□□□ -0.4
SH3D21-203ENST00000480549 SCGB1C2P0DMR2 95 aa12.56□□□□□ -0.4
SH3D21-203ENST00000480549 SYNJ2BPP57105 145 aa12.56□□□□□ -0.4
SH3D21-203ENST00000480549 TMEM86BQ8N661 226 aa12.56□□□□□ -0.4
SH3D21-203ENST00000480549 FLNAP21333 2647 aaKnown RBP12.56□□□□□ -0.4
SH3D21-203ENST00000480549 HELZ2Q9BYK8 2649 aaKnown RBP12.56□□□□□ -0.4
SH3D21-203ENST00000480549 GAS8-AS1O95177 125 aa12.56□□□□□ -0.4
SH3D21-203ENST00000480549 RASL10AQ92737 203 aa12.56□□□□□ -0.4
SH3D21-203ENST00000480549 HOXD3P31249 432 aaPredicted RBP12.55□□□□□ -0.4
SH3D21-203ENST00000480549 C18orf65Q6ZTR6 163 aa12.55□□□□□ -0.4
SH3D21-203ENST00000480549 CUBNO60494 3623 aa12.55□□□□□ -0.4
SH3D21-203ENST00000480549 CHCHD5Q9BSY4 110 aa12.55□□□□□ -0.4
SH3D21-203ENST00000480549 LINC00694P0DN24 101 aa12.55□□□□□ -0.4
SH3D21-203ENST00000480549 APRG1Q8IVJ8 170 aa12.55□□□□□ -0.4
SH3D21-203ENST00000480549 MRPL23Q16540 153 aaKnown RBP12.54□□□□□ -0.4
SH3D21-203ENST00000480549 C15orf53Q8NAA6 179 aa12.54□□□□□ -0.4
SH3D21-203ENST00000480549 ANK3Q12955 4377 aaKnown RBP12.54□□□□□ -0.4
SH3D21-203ENST00000480549 SRSF9Q13242 221 aaKnown RBP eCLIP12.54□□□□□ -0.4
SH3D21-203ENST00000480549 ATP5LO75964 103 aa12.53□□□□□ -0.4
SH3D21-203ENST00000480549 RNF185Q96GF1 192 aa12.53□□□□□ -0.4
SH3D21-203ENST00000480549 TLN2Q9Y4G6 2542 aa12.53□□□□□ -0.4
SH3D21-203ENST00000480549 UBE2D3P61077 147 aa12.53□□□□□ -0.4
SH3D21-203ENST00000480549 UBE2D2P62837 147 aa12.53□□□□□ -0.4
SH3D21-203ENST00000480549 DNAJC9-AS1A6NH13 148 aa12.53□□□□□ -0.4
SH3D21-203ENST00000480549 ASIPP42127 132 aa12.53□□□□□ -0.4
SH3D21-203ENST00000480549 TMEM126AQ9H061 195 aa12.52□□□□□ -0.41
SH3D21-203ENST00000480549 C9JAW5 83 aa12.52□□□□□ -0.41
SH3D21-203ENST00000480549 DEFB136Q30KP8 78 aa12.52□□□□□ -0.41
SH3D21-203ENST00000480549 LYRM7Q5U5X0 104 aa12.52□□□□□ -0.41
SH3D21-203ENST00000480549 ITPR2Q14571 2701 aa12.52□□□□□ -0.41
SH3D21-203ENST00000480549 CCDC168Q8NDH2 2452 aa12.51□□□□□ -0.41
SH3D21-203ENST00000480549 TRAV21A0A0B4J279 112 aa12.51□□□□□ -0.41
SH3D21-203ENST00000480549 SLC25A20O43772 301 aa12.51□□□□□ -0.41
SH3D21-203ENST00000480549 SCGB1D4Q6XE38 83 aa12.51□□□□□ -0.41
SH3D21-203ENST00000480549 Q6ZSV7 163 aa12.51□□□□□ -0.41
SH3D21-203ENST00000480549 ESM1Q9NQ30 184 aa12.51□□□□□ -0.41
SH3D21-203ENST00000480549 GATA1P15976 413 aaPredicted RBP12.51□□□□□ -0.41
SH3D21-203ENST00000480549 K7EQG2 157 aa12.5□□□□□ -0.41
SH3D21-203ENST00000480549 SLURP1P55000 103 aa12.5□□□□□ -0.41
SH3D21-203ENST00000480549 SMIM9A6NGZ8 99 aa12.5□□□□□ -0.41
SH3D21-203ENST00000480549 NTN5Q8WTR8 489 aaPredicted RBP12.5□□□□□ -0.41
SH3D21-203ENST00000480549 IGHV4-4A0A075B6R2 117 aa12.49□□□□□ -0.41
SH3D21-203ENST00000480549 LINC01587Q99440 93 aa12.49□□□□□ -0.41
SH3D21-203ENST00000480549 RNASE4P34096 147 aaKnown RBP12.49□□□□□ -0.41
SH3D21-203ENST00000480549 Q6Q795 121 aa12.49□□□□□ -0.41
SH3D21-203ENST00000480549 SBSPONQ8IVN8 264 aa12.49□□□□□ -0.41
SH3D21-203ENST00000480549 MDFICQ9P1T7 246 aa12.49□□□□□ -0.41
SH3D21-203ENST00000480549 KLLNB2CW77 178 aa12.49□□□□□ -0.41
SH3D21-203ENST00000480549 C4orf3Q8WVX3 66 aa12.49□□□□□ -0.41
SH3D21-203ENST00000480549 UNC79Q9P2D8 2635 aa12.48□□□□□ -0.41
SH3D21-203ENST00000480549 SONP18583 2426 aaKnown RBP12.48□□□□□ -0.41
SH3D21-203ENST00000480549 ODF3Q96PU9 254 aa12.48□□□□□ -0.41
SH3D21-203ENST00000480549 SPANXA1Q9NS26 97 aa12.48□□□□□ -0.41
SH3D21-203ENST00000480549 TRAV8-4A0A0B4J246 113 aa12.47□□□□□ -0.41
SH3D21-203ENST00000480549 TRPT1Q86TN4 253 aaKnown RBP12.47□□□□□ -0.41
SH3D21-203ENST00000480549 LINC01619G3V211 115 aa12.47□□□□□ -0.41
SH3D21-203ENST00000480549 TNFRSF6BO95407 300 aa12.47□□□□□ -0.41
SH3D21-203ENST00000480549 UBE2D1P51668 147 aa12.47□□□□□ -0.41
SH3D21-203ENST00000480549 Q8N1Y9 231 aa12.47□□□□□ -0.41
SH3D21-203ENST00000480549 PLEKHB2Q96CS7 222 aa12.47□□□□□ -0.41
SH3D21-203ENST00000480549 DNAJC30Q96LL9 226 aa12.47□□□□□ -0.41
SH3D21-203ENST00000480549 TRAV25A0A0B4J276 109 aa12.46□□□□□ -0.41
SH3D21-203ENST00000480549 HIST2H2BDQ6DRA6 164 aa12.46□□□□□ -0.41
SH3D21-203ENST00000480549 A0A0J9YX75 114 aa12.46□□□□□ -0.42
SH3D21-203ENST00000480549 ZNF815PA8K554 130 aa12.46□□□□□ -0.42
SH3D21-203ENST00000480549 SNRPD3P62318 126 aaKnown RBP12.46□□□□□ -0.42
SH3D21-203ENST00000480549 DUX3Q96PT4 197 aa12.46□□□□□ -0.42
SH3D21-203ENST00000480549 NXT2Q9NPJ8 142 aaKnown RBP12.45□□□□□ -0.42
SH3D21-203ENST00000480549 TRAV2A0A0B4J234 112 aa12.45□□□□□ -0.42
SH3D21-203ENST00000480549 A4D1N5 150 aa12.45□□□□□ -0.42
SH3D21-203ENST00000480549 SPANXN1Q5VSR9 72 aa12.45□□□□□ -0.42
SH3D21-203ENST00000480549 NDUFA11Q86Y39 141 aa12.45□□□□□ -0.42
SH3D21-203ENST00000480549 MYO9AB2RTY4 2548 aa12.45□□□□□ -0.42
SH3D21-203ENST00000480549 GCN1Q92616 2671 aaKnown RBP12.45□□□□□ -0.42
SH3D21-203ENST00000480549 FAM19A5Q7Z5A7 132 aaPredicted RBP12.44□□□□□ -0.42
SH3D21-203ENST00000480549 TEX49A0A1B0GTD5 131 aa12.44□□□□□ -0.42
SH3D21-203ENST00000480549 H7C2G1 150 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms