RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 CUL9Q8IWT3 2517 aa3.35□□□□□ -1.87
RC3H1-204ENST00000479099 COL1A2P08123 1366 aa3.35□□□□□ -1.87
RC3H1-204ENST00000479099 SCN11AQ9UI33 1791 aa3.35□□□□□ -1.87
RC3H1-204ENST00000479099 NRXN1Q9ULB1 1477 aa3.35□□□□□ -1.87
RC3H1-204ENST00000479099 ABCC2Q92887 1545 aa3.34□□□□□ -1.87
RC3H1-204ENST00000479099 MICAL3Q7RTP6 2002 aa3.34□□□□□ -1.87
RC3H1-204ENST00000479099 CACNA1DQ01668 2161 aa3.34□□□□□ -1.87
RC3H1-204ENST00000479099 TRBV10-1A0A0K0K1A3 114 aa3.34□□□□□ -1.87
RC3H1-204ENST00000479099 KANTRA0A1W2PQU2 76 aa3.34□□□□□ -1.87
RC3H1-204ENST00000479099 UBE2D3P61077 147 aa3.34□□□□□ -1.87
RC3H1-204ENST00000479099 UBE2D2P62837 147 aa3.34□□□□□ -1.87
RC3H1-204ENST00000479099 PYDC2Q56P42 97 aa3.34□□□□□ -1.87
RC3H1-204ENST00000479099 ZNF818PQ6ZRF7 136 aa3.34□□□□□ -1.87
RC3H1-204ENST00000479099 TIMM21Q9BVV7 248 aa3.34□□□□□ -1.87
RC3H1-204ENST00000479099 HIGD1BQ9P298 99 aa3.34□□□□□ -1.87
RC3H1-204ENST00000479099 UBR1Q8IWV7 1749 aa3.33□□□□□ -1.88
RC3H1-204ENST00000479099 TRAV23DV6A0A075B6W5 121 aa3.33□□□□□ -1.88
RC3H1-204ENST00000479099 BCE1O60756 84 aa3.33□□□□□ -1.88
RC3H1-204ENST00000479099 CTSGP08311 255 aa3.33□□□□□ -1.88
RC3H1-204ENST00000479099 NUMA1Q14980 2115 aa3.33□□□□□ -1.88
RC3H1-204ENST00000479099 CSAG1Q6PB30 78 aa3.33□□□□□ -1.88
RC3H1-204ENST00000479099 Q8N9L7 120 aa3.33□□□□□ -1.88
RC3H1-204ENST00000479099 C4orf3Q8WVX3 66 aa3.33□□□□□ -1.88
RC3H1-204ENST00000479099 MANBALQ9NQG1 85 aa3.33□□□□□ -1.88
RC3H1-204ENST00000479099 BLMP54132 1417 aaPredicted RBP3.33□□□□□ -1.88
RC3H1-204ENST00000479099 CDK13Q14004 1512 aaKnown RBP3.33□□□□□ -1.88
RC3H1-204ENST00000479099 COL4A6Q14031 1691 aa3.33□□□□□ -1.88
RC3H1-204ENST00000479099 MYO5CQ9NQX4 1742 aa3.33□□□□□ -1.88
RC3H1-204ENST00000479099 H3BUT2 72 aa3.32□□□□□ -1.88
RC3H1-204ENST00000479099 SNRPFP62306 86 aaKnown RBP3.32□□□□□ -1.88
RC3H1-204ENST00000479099 KLKP1Q107X0 134 aa3.32□□□□□ -1.88
RC3H1-204ENST00000479099 ELOBQ15370 118 aa3.32□□□□□ -1.88
RC3H1-204ENST00000479099 DEFB134Q4QY38 66 aa3.32□□□□□ -1.88
RC3H1-204ENST00000479099 SPATA45Q537H7 98 aa3.32□□□□□ -1.88
RC3H1-204ENST00000479099 VMO1Q7Z5L0 202 aa3.32□□□□□ -1.88
RC3H1-204ENST00000479099 C18orf32Q8TCD1 76 aa3.32□□□□□ -1.88
RC3H1-204ENST00000479099 DMAC1Q96GE9 116 aa3.32□□□□□ -1.88
RC3H1-204ENST00000479099 ODF3Q96PU9 254 aa3.32□□□□□ -1.88
RC3H1-204ENST00000479099 PRO1854Q9UHT4 67 aa3.32□□□□□ -1.88
RC3H1-204ENST00000479099 HFM1A2PYH4 1435 aa3.32□□□□□ -1.88
RC3H1-204ENST00000479099 ABCA10Q8WWZ4 1543 aa3.32□□□□□ -1.88
RC3H1-204ENST00000479099 ABCC1P33527 1531 aa3.31□□□□□ -1.88
RC3H1-204ENST00000479099 KCPQ6ZWJ8 1503 aa3.31□□□□□ -1.88
RC3H1-204ENST00000479099 TRBV7-3A0A075B6L6 115 aa3.31□□□□□ -1.88
RC3H1-204ENST00000479099 F2Z2F3 143 aa3.31□□□□□ -1.88
RC3H1-204ENST00000479099 UBE2D1P51668 147 aa3.31□□□□□ -1.88
RC3H1-204ENST00000479099 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
RC3H1-204ENST00000479099 MPDZO75970 2070 aa3.31□□□□□ -1.88
RC3H1-204ENST00000479099 EXPH5Q8NEV8 1989 aa3.31□□□□□ -1.88
RC3H1-204ENST00000479099 STRCP1A6NGW2 1772 aa3.3□□□□□ -1.88
RC3H1-204ENST00000479099 ZNF142P52746 1687 aaPredicted RBP3.3□□□□□ -1.88
RC3H1-204ENST00000479099 IGLV4-60A0A075B6I1 120 aa3.3□□□□□ -1.88
RC3H1-204ENST00000479099 TRAV22A0A0B4J277 110 aa3.3□□□□□ -1.88
RC3H1-204ENST00000479099 KRTAP11-1Q8IUC1 163 aa3.3□□□□□ -1.88
RC3H1-204ENST00000479099 PATE1Q8WXA2 126 aa3.3□□□□□ -1.88
RC3H1-204ENST00000479099 ORMDL1Q9P0S3 153 aa3.3□□□□□ -1.88
RC3H1-204ENST00000479099 MYOFQ9NZM1 2061 aa3.3□□□□□ -1.88
RC3H1-204ENST00000479099 SETBP1Q9Y6X0 1596 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 A0A0G2JND7 137 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 A0A0J9YY99 117 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 TEX49A0A1B0GTD5 131 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 NUPR2A6NF83 97 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 RTL8CO15255 209 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 C10orf128Q5T292 105 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 Q5VV11 94 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 Q8N6K4 173 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 BPESC1Q9GZL8 116 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 RGPD2P0DJD1 1756 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 MED12LQ86YW9 2145 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 CUX1P39880 1505 aa3.29□□□□□ -1.88
RC3H1-204ENST00000479099 RP1P56715 2156 aa3.28□□□□□ -1.88
RC3H1-204ENST00000479099 ZGRF1Q86YA3 2104 aa3.28□□□□□ -1.88
RC3H1-204ENST00000479099 A0A1W2PNU3 283 aaPredicted RBP3.28□□□□□ -1.88
RC3H1-204ENST00000479099 ACYP1P07311 99 aa3.28□□□□□ -1.88
RC3H1-204ENST00000479099 EFNA4P52798 201 aa3.28□□□□□ -1.88
RC3H1-204ENST00000479099 PMCHL1Q16048 86 aa3.28□□□□□ -1.88
RC3H1-204ENST00000479099 TPRXLQ17RH7 258 aa3.28□□□□□ -1.88
RC3H1-204ENST00000479099 CFAP126Q5VTH2 177 aa3.28□□□□□ -1.88
RC3H1-204ENST00000479099 SPINK14Q6IE38 97 aa3.28□□□□□ -1.88
RC3H1-204ENST00000479099 MRPL36Q9P0J6 103 aaKnown RBP3.28□□□□□ -1.88
RC3H1-204ENST00000479099 TOP2BQ02880 1626 aa3.28□□□□□ -1.88
RC3H1-204ENST00000479099 IQSEC2Q5JU85 1478 aa3.28□□□□□ -1.88
RC3H1-204ENST00000479099 LRRC9Q6ZRR7 1453 aa3.28□□□□□ -1.88
RC3H1-204ENST00000479099 RGPD8O14715 1765 aaPredicted RBP3.28□□□□□ -1.89
RC3H1-204ENST00000479099 RGPD5Q99666 1765 aa3.28□□□□□ -1.89
RC3H1-204ENST00000479099 IGKV2D-24A0A075B6R9 120 aa3.27□□□□□ -1.89
RC3H1-204ENST00000479099 A0A0G2JQZ4 141 aa3.27□□□□□ -1.89
RC3H1-204ENST00000479099 COX6CP09669 75 aa3.27□□□□□ -1.89
RC3H1-204ENST00000479099 SMIM11AP58511 58 aa3.27□□□□□ -1.89
RC3H1-204ENST00000479099 LIMD2Q9BT23 127 aa3.27□□□□□ -1.89
RC3H1-204ENST00000479099 HEATR1Q9H583 2144 aaKnown RBP3.27□□□□□ -1.89
RC3H1-204ENST00000479099 PRR34Q9NV39 138 aa3.27□□□□□ -1.89
RC3H1-204ENST00000479099 MADDQ8WXG6 1647 aa3.26□□□□□ -1.89
RC3H1-204ENST00000479099 KDM3BQ7LBC6 1761 aa3.26□□□□□ -1.89
RC3H1-204ENST00000479099 DUOX2Q9NRD8 1548 aa3.26□□□□□ -1.89
RC3H1-204ENST00000479099 IGKV3-7A0A075B6H7 116 aa3.26□□□□□ -1.89
RC3H1-204ENST00000479099 SDHAF1A6NFY7 115 aa3.26□□□□□ -1.89
RC3H1-204ENST00000479099 LINC00643Q86TS7 51 aa3.26□□□□□ -1.89
RC3H1-204ENST00000479099 FAM223AQ8IWN6 122 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms