RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 IGHV1-69P01742 117 aa11.08□□□□□ -0.64
U2AF1-210ENST00000478282 TRAV2A0A0B4J234 112 aa11.08□□□□□ -0.64
U2AF1-210ENST00000478282 SRD5A1P18405 259 aa11.07□□□□□ -0.64
U2AF1-210ENST00000478282 ZNF256Q9Y2P7 627 aaPredicted RBP11.07□□□□□ -0.64
U2AF1-210ENST00000478282 H7C2G1 150 aa11.07□□□□□ -0.64
U2AF1-210ENST00000478282 MUSTN1Q8IVN3 82 aa11.07□□□□□ -0.64
U2AF1-210ENST00000478282 NSUN5P1Q3KNT7 163 aa11.07□□□□□ -0.64
U2AF1-210ENST00000478282 OPRPNQ99935 248 aaPredicted RBP11.07□□□□□ -0.64
U2AF1-210ENST00000478282 RHOHQ15669 191 aa11.06□□□□□ -0.64
U2AF1-210ENST00000478282 UBTD1Q9HAC8 227 aa11.06□□□□□ -0.64
U2AF1-210ENST00000478282 FAM74A4Q5TZK3 123 aa11.06□□□□□ -0.64
U2AF1-210ENST00000478282 RHPN1-AS1Q9BWJ2 59 aa11.06□□□□□ -0.64
U2AF1-210ENST00000478282 NBPF19A0A087WUL8 3843 aa11.06□□□□□ -0.64
U2AF1-210ENST00000478282 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
U2AF1-210ENST00000478282 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
U2AF1-210ENST00000478282 ATXN8Q156A1 80 aa11.06□□□□□ -0.64
U2AF1-210ENST00000478282 NTN5Q8WTR8 489 aaPredicted RBP11.06□□□□□ -0.64
U2AF1-210ENST00000478282 SVEP1Q4LDE5 3571 aa11.05□□□□□ -0.64
U2AF1-210ENST00000478282 RHODO00212 210 aa11.05□□□□□ -0.64
U2AF1-210ENST00000478282 IGHV3-11P01762 117 aa11.05□□□□□ -0.64
U2AF1-210ENST00000478282 GAGE5Q13069 117 aa11.05□□□□□ -0.64
U2AF1-210ENST00000478282 GAGE6Q13070 117 aa11.05□□□□□ -0.64
U2AF1-210ENST00000478282 LINC01620Q4KN68 170 aa11.05□□□□□ -0.64
U2AF1-210ENST00000478282 LRRK2Q5S007 2527 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 A0A0J9YX75 114 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 ELANEP08246 267 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 LMO4P61968 165 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 Q8N1Y9 231 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 USMG5Q96IX5 58 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 LINC01600Q96MT4 127 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 USP9YO00507 2555 aaPredicted RBP11.04□□□□□ -0.64
U2AF1-210ENST00000478282 IGHV3-64A0A075B6Q5 118 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 M0QY20 66 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 NHLRC4P0CG21 123 aaPredicted RBP11.04□□□□□ -0.64
U2AF1-210ENST00000478282 Q1RN00 199 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 CRYBG3Q68DQ2 2970 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 TRAV12-3A0A0B4J271 114 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 M0R2P5 195 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 SNCGO76070 127 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 ZNF56Q15929 161 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 MDFICQ9P1T7 246 aa11.04□□□□□ -0.64
U2AF1-210ENST00000478282 HELZ2Q9BYK8 2649 aaKnown RBP11.04□□□□□ -0.64
U2AF1-210ENST00000478282 GAGE2BQ13066 116 aa11.03□□□□□ -0.64
U2AF1-210ENST00000478282 GAGE2EQ4V326 116 aa11.03□□□□□ -0.64
U2AF1-210ENST00000478282 C9orf85Q96MD7 179 aa11.03□□□□□ -0.64
U2AF1-210ENST00000478282 GAGE2DQ9UEU5 116 aa11.03□□□□□ -0.64
U2AF1-210ENST00000478282 GCN1Q92616 2671 aaKnown RBP11.03□□□□□ -0.64
U2AF1-210ENST00000478282 SS18L2Q9UHA2 77 aa11.02□□□□□ -0.64
U2AF1-210ENST00000478282 TRAV4A0A0B4J268 109 aa11.02□□□□□ -0.65
U2AF1-210ENST00000478282 RPL13AP40429 203 aaKnown RBP11.02□□□□□ -0.65
U2AF1-210ENST00000478282 C20orf203Q8NBC4 194 aa11.02□□□□□ -0.65
U2AF1-210ENST00000478282 CELSR2Q9HCU4 2923 aa11.02□□□□□ -0.65
U2AF1-210ENST00000478282 IGHV3-16A0A0C4DH30 117 aa11.02□□□□□ -0.65
U2AF1-210ENST00000478282 A0A0J9YXV3 536 aa11.02□□□□□ -0.65
U2AF1-210ENST00000478282 A0A0J9YXY3 114 aa11.02□□□□□ -0.65
U2AF1-210ENST00000478282 H3BUA1 57 aa11.02□□□□□ -0.65
U2AF1-210ENST00000478282 BRI3O95415 125 aa11.02□□□□□ -0.65
U2AF1-210ENST00000478282 IGHV4-39P01824 125 aa11.02□□□□□ -0.65
U2AF1-210ENST00000478282 BPESC1Q9GZL8 116 aa11.02□□□□□ -0.65
U2AF1-210ENST00000478282 IGHV3OR16-10A0A075B7F0 116 aa11.01□□□□□ -0.65
U2AF1-210ENST00000478282 TRBV30A0A0K0K1B3 111 aa11.01□□□□□ -0.65
U2AF1-210ENST00000478282 CRLF1O75462 422 aa11.01□□□□□ -0.65
U2AF1-210ENST00000478282 DAZ1Q9NQZ3 744 aaKnown RBP11.01□□□□□ -0.65
U2AF1-210ENST00000478282 TRBV10-2A0A0K0K1G8 114 aa11.01□□□□□ -0.65
U2AF1-210ENST00000478282 ID1P41134 155 aa11.01□□□□□ -0.65
U2AF1-210ENST00000478282 NDUFV3P56181 108 aaKnown RBP11.01□□□□□ -0.65
U2AF1-210ENST00000478282 IGLV4-3A0A075B6K6 122 aa11.01□□□□□ -0.65
U2AF1-210ENST00000478282 ZNF580Q9UK33 172 aa11.01□□□□□ -0.65
U2AF1-210ENST00000478282 ASH1LQ9NR48 2969 aaKnown RBP11□□□□□ -0.65
U2AF1-210ENST00000478282 TRIAP1O43715 76 aa11□□□□□ -0.65
U2AF1-210ENST00000478282 CCL19Q99731 98 aa11□□□□□ -0.65
U2AF1-210ENST00000478282 PF4V1P10720 104 aa11□□□□□ -0.65
U2AF1-210ENST00000478282 DCANP1Q8TF63 244 aa11□□□□□ -0.65
U2AF1-210ENST00000478282 TRAV8-4A0A0B4J246 113 aa10.99□□□□□ -0.65
U2AF1-210ENST00000478282 TEX49A0A1B0GTD5 131 aa10.99□□□□□ -0.65
U2AF1-210ENST00000478282 B5MCH6 92 aa10.99□□□□□ -0.65
U2AF1-210ENST00000478282 Q6Q795 121 aa10.99□□□□□ -0.65
U2AF1-210ENST00000478282 BEX4Q9NWD9 120 aaPredicted RBP10.99□□□□□ -0.65
U2AF1-210ENST00000478282 VPS13CQ709C8 3753 aa10.99□□□□□ -0.65
U2AF1-210ENST00000478282 I3L3M4 83 aa10.99□□□□□ -0.65
U2AF1-210ENST00000478282 EDN2P20800 178 aa10.99□□□□□ -0.65
U2AF1-210ENST00000478282 KRTAP10-9P60411 292 aa10.99□□□□□ -0.65
U2AF1-210ENST00000478282 ODF3Q96PU9 254 aa10.99□□□□□ -0.65
U2AF1-210ENST00000478282 LITAFQ99732 161 aa10.99□□□□□ -0.65
U2AF1-210ENST00000478282 H3BMM0 161 aa10.98□□□□□ -0.65
U2AF1-210ENST00000478282 IGHG2P01859 326 aa10.98□□□□□ -0.65
U2AF1-210ENST00000478282 IGHV3-30-3P0DP02 117 aa10.98□□□□□ -0.65
U2AF1-210ENST00000478282 UBE2WQ96B02 151 aa10.98□□□□□ -0.65
U2AF1-210ENST00000478282 BRD3OSQ6XYD6 125 aa10.97□□□□□ -0.65
U2AF1-210ENST00000478282 IFITM1P13164 125 aa10.97□□□□□ -0.65
U2AF1-210ENST00000478282 TTC32Q5I0X7 151 aa10.97□□□□□ -0.65
U2AF1-210ENST00000478282 TIMM21Q9BVV7 248 aa10.97□□□□□ -0.65
U2AF1-210ENST00000478282 ADARB2-AS1A8MUL3 147 aa10.97□□□□□ -0.65
U2AF1-210ENST00000478282 TRAV12-2A0A075B6T6 113 aa10.96□□□□□ -0.65
U2AF1-210ENST00000478282 LY6EQ16553 131 aa10.96□□□□□ -0.65
U2AF1-210ENST00000478282 SPXQ9BT56 116 aa10.96□□□□□ -0.65
U2AF1-210ENST00000478282 LRRC75A-AS1Q8N1F1 130 aa10.96□□□□□ -0.66
U2AF1-210ENST00000478282 ICOSQ9Y6W8 199 aa10.96□□□□□ -0.66
U2AF1-210ENST00000478282 APCP25054 2843 aa10.96□□□□□ -0.66
U2AF1-210ENST00000478282 PRRC2AP48634 2157 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms