RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 GAGE12JA6NER3 117 aa10.64□□□□□ -0.71
SEC13-215ENST00000477547 GAGE1Q13065 139 aa10.64□□□□□ -0.71
SEC13-215ENST00000477547 GAGE4Q13068 117 aa10.64□□□□□ -0.71
SEC13-215ENST00000477547 GAGE5Q13069 117 aa10.64□□□□□ -0.71
SEC13-215ENST00000477547 GAGE13Q4V321 117 aa10.64□□□□□ -0.71
SEC13-215ENST00000477547 GATD1Q8NB37 220 aa10.64□□□□□ -0.71
SEC13-215ENST00000477547 M0QY20 66 aa10.63□□□□□ -0.71
SEC13-215ENST00000477547 LINC00694P0DN24 101 aa10.63□□□□□ -0.71
SEC13-215ENST00000477547 RPL36AP83881 106 aaKnown RBP10.63□□□□□ -0.71
SEC13-215ENST00000477547 RASL11AQ6T310 242 aa10.63□□□□□ -0.71
SEC13-215ENST00000477547 NEXN-AS1Q8NBZ9 246 aa10.63□□□□□ -0.71
SEC13-215ENST00000477547 RPL36ALQ969Q0 106 aaKnown RBP10.63□□□□□ -0.71
SEC13-215ENST00000477547 RNF185Q96GF1 192 aa10.63□□□□□ -0.71
SEC13-215ENST00000477547 Q9UF83 564 aa10.63□□□□□ -0.71
SEC13-215ENST00000477547 ATP6V1G1O75348 118 aa10.62□□□□□ -0.71
SEC13-215ENST00000477547 FAM104BQ5XKR9 115 aa10.62□□□□□ -0.71
SEC13-215ENST00000477547 NEGR1Q7Z3B1 354 aa10.62□□□□□ -0.71
SEC13-215ENST00000477547 CBLN2Q8IUK8 224 aa10.62□□□□□ -0.71
SEC13-215ENST00000477547 NCR2O95944 276 aa10.61□□□□□ -0.71
SEC13-215ENST00000477547 RAB4AP20338 218 aa10.61□□□□□ -0.71
SEC13-215ENST00000477547 SH2D6Q7Z4S9 175 aa10.61□□□□□ -0.71
SEC13-215ENST00000477547 UBE2DNLQ8IWF7 75 aa10.61□□□□□ -0.71
SEC13-215ENST00000477547 ZNRF2Q8NHG8 242 aa10.61□□□□□ -0.71
SEC13-215ENST00000477547 MRAP2Q96G30 205 aa10.61□□□□□ -0.71
SEC13-215ENST00000477547 TRBV7-3A0A075B6L6 115 aa10.6□□□□□ -0.71
SEC13-215ENST00000477547 ELOBQ15370 118 aa10.6□□□□□ -0.71
SEC13-215ENST00000477547 MRPL51Q4U2R6 128 aaKnown RBP10.6□□□□□ -0.71
SEC13-215ENST00000477547 FRZBQ92765 325 aa10.6□□□□□ -0.71
SEC13-215ENST00000477547 RPL39LQ96EH5 51 aaKnown RBP10.6□□□□□ -0.71
SEC13-215ENST00000477547 SMCO4Q9NRQ5 59 aa10.6□□□□□ -0.71
SEC13-215ENST00000477547 TGIF2-C20orf24A0A0A6YYL0 155 aa10.59□□□□□ -0.71
SEC13-215ENST00000477547 SMKR1H3BMG3 65 aa10.59□□□□□ -0.71
SEC13-215ENST00000477547 UBE2D3P61077 147 aa10.59□□□□□ -0.71
SEC13-215ENST00000477547 UBE2D2P62837 147 aa10.59□□□□□ -0.71
SEC13-215ENST00000477547 OR10J3Q5JRS4 329 aa10.59□□□□□ -0.71
SEC13-215ENST00000477547 TMEM136Q6ZRR5 245 aa10.59□□□□□ -0.71
SEC13-215ENST00000477547 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
SEC13-215ENST00000477547 DNAJC30Q96LL9 226 aa10.59□□□□□ -0.71
SEC13-215ENST00000477547 TNFRSF18Q9Y5U5 241 aa10.59□□□□□ -0.71
SEC13-215ENST00000477547 GAS8-AS1O95177 125 aa10.58□□□□□ -0.71
SEC13-215ENST00000477547 CCL18P55774 89 aa10.58□□□□□ -0.71
SEC13-215ENST00000477547 LINC00476Q8WZB0 136 aa10.58□□□□□ -0.71
SEC13-215ENST00000477547 NIT2Q9NQR4 276 aa10.58□□□□□ -0.71
SEC13-215ENST00000477547 TRBV24-1A0A075B6N3 115 aa10.58□□□□□ -0.72
SEC13-215ENST00000477547 HLA-DQA1P01909 254 aa10.58□□□□□ -0.72
SEC13-215ENST00000477547 RPS10P46783 165 aaKnown RBP10.58□□□□□ -0.72
SEC13-215ENST00000477547 COX19Q49B96 90 aa10.58□□□□□ -0.72
SEC13-215ENST00000477547 IGHV3-38A0A0C4DH36 116 aa10.57□□□□□ -0.72
SEC13-215ENST00000477547 D6R8Y8 96 aa10.57□□□□□ -0.72
SEC13-215ENST00000477547 CKS2P33552 79 aa10.57□□□□□ -0.72
SEC13-215ENST00000477547 ESRGQ1W209 222 aa10.57□□□□□ -0.72
SEC13-215ENST00000477547 LGALS9CQ6DKI2 356 aa10.57□□□□□ -0.72
SEC13-215ENST00000477547 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.57□□□□□ -0.72
SEC13-215ENST00000477547 YPEL4Q96NS1 127 aa10.57□□□□□ -0.72
SEC13-215ENST00000477547 LINC00588Q9Y4M8 146 aa10.57□□□□□ -0.72
SEC13-215ENST00000477547 KIAA1109Q2LD37 5005 aa10.56□□□□□ -0.72
SEC13-215ENST00000477547 LY6G6CO95867 125 aa10.56□□□□□ -0.72
SEC13-215ENST00000477547 MT-ND6P03923 174 aa10.56□□□□□ -0.72
SEC13-215ENST00000477547 S100A1P23297 94 aa10.56□□□□□ -0.72
SEC13-215ENST00000477547 LYPD5Q6UWN5 251 aa10.56□□□□□ -0.72
SEC13-215ENST00000477547 ORMDL3Q8N138 153 aa10.56□□□□□ -0.72
SEC13-215ENST00000477547 GNB1LQ9BYB4 327 aa10.56□□□□□ -0.72
SEC13-215ENST00000477547 GTSF1LQ9H1H1 148 aa10.56□□□□□ -0.72
SEC13-215ENST00000477547 MRPS16Q9Y3D3 137 aaKnown RBP10.56□□□□□ -0.72
SEC13-215ENST00000477547 DNAH10Q8IVF4 4471 aa10.55□□□□□ -0.72
SEC13-215ENST00000477547 TRBV6-5A0A0K0K1A5 114 aa10.55□□□□□ -0.72
SEC13-215ENST00000477547 SCO1O75880 301 aa10.55□□□□□ -0.72
SEC13-215ENST00000477547 PPP1R17O96001 155 aa10.55□□□□□ -0.72
SEC13-215ENST00000477547 PPBPP02775 128 aa10.55□□□□□ -0.72
SEC13-215ENST00000477547 TIRAPP58753 221 aa10.55□□□□□ -0.72
SEC13-215ENST00000477547 DAZ4Q86SG3 579 aaKnown RBP10.55□□□□□ -0.72
SEC13-215ENST00000477547 NRACQ8N912 160 aa10.55□□□□□ -0.72
SEC13-215ENST00000477547 ST20Q9HBF5 79 aa10.55□□□□□ -0.72
SEC13-215ENST00000477547 DAZ3Q9NR90 486 aaKnown RBP10.55□□□□□ -0.72
SEC13-215ENST00000477547 SDHAF1A6NFY7 115 aa10.54□□□□□ -0.72
SEC13-215ENST00000477547 APCSP02743 223 aa10.54□□□□□ -0.72
SEC13-215ENST00000477547 PRELID3AQ96N28 172 aa10.54□□□□□ -0.72
SEC13-215ENST00000477547 NPYP01303 97 aa10.53□□□□□ -0.72
SEC13-215ENST00000477547 LELP1Q5T871 98 aa10.53□□□□□ -0.72
SEC13-215ENST00000477547 MRPL18Q9H0U6 180 aaKnown RBP10.53□□□□□ -0.72
SEC13-215ENST00000477547 TNFRSF6BO95407 300 aa10.52□□□□□ -0.73
SEC13-215ENST00000477547 SUMO2P61956 95 aaKnown RBP10.52□□□□□ -0.73
SEC13-215ENST00000477547 UPK3BQ9BT76 320 aa10.52□□□□□ -0.73
SEC13-215ENST00000477547 TMEM70Q9BUB7 260 aa10.52□□□□□ -0.73
SEC13-215ENST00000477547 KMT2AQ03164 3969 aa10.52□□□□□ -0.73
SEC13-215ENST00000477547 HECTD4Q9Y4D8 3996 aa10.52□□□□□ -0.73
SEC13-215ENST00000477547 PHOX2AO14813 284 aa10.51□□□□□ -0.73
SEC13-215ENST00000477547 COTL1Q14019 142 aa10.51□□□□□ -0.73
SEC13-215ENST00000477547 KIAA1644Q3SXP7 199 aa10.51□□□□□ -0.73
SEC13-215ENST00000477547 TMEM97Q5BJF2 176 aa10.51□□□□□ -0.73
SEC13-215ENST00000477547 WFDC10BQ8IUB3 73 aa10.51□□□□□ -0.73
SEC13-215ENST00000477547 LAMTOR2Q9Y2Q5 125 aa10.51□□□□□ -0.73
SEC13-215ENST00000477547 TRAPPC1Q9Y5R8 145 aa10.51□□□□□ -0.73
SEC13-215ENST00000477547 TRBV6-8A0A0A6YYG3 113 aa10.5□□□□□ -0.73
SEC13-215ENST00000477547 TRAV8-6A0A0B4J262 113 aa10.5□□□□□ -0.73
SEC13-215ENST00000477547 FABP9Q0Z7S8 132 aa10.5□□□□□ -0.73
SEC13-215ENST00000477547 DEFB104AQ8WTQ1 72 aa10.5□□□□□ -0.73
SEC13-215ENST00000477547 C20orf78Q9BR46 151 aa10.5□□□□□ -0.73
SEC13-215ENST00000477547 SMIM2Q9BVW6 85 aa10.5□□□□□ -0.73
SEC13-215ENST00000477547 TRBV25-1A0A075B6N4 114 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms