RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 MYH11P35749 1972 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 TRAV13-2A0A0B4J235 113 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 TRAV10A0A0B4J240 114 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 NAP1L6A6NFF2 107 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 HCG22E2RYF7 251 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 CXCL8P10145 99 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 FAUP35544 74 aaKnown RBP0.78□□□□□ -2.28
TARDBP-208ENST00000477447 EFNA4P52798 201 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 KRTDAPP60985 99 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 GNG11P61952 73 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 CNBPP62633 177 aaKnown RBP0.78□□□□□ -2.28
TARDBP-208ENST00000477447 KLKP1Q107X0 134 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 MPV17LQ2QL34 196 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 CFAP126Q5VTH2 177 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 Q5VV11 94 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 VMO1Q7Z5L0 202 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 C18orf32Q8TCD1 76 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 FAM167A-AS1Q96KT0 104 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 MGST2Q99735 147 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 BPESC1Q9GZL8 116 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 CYP4F30PQ9H0H9 118 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 C22orf24Q9Y442 160 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 EDC4Q6P2E9 1401 aaKnown RBP0.78□□□□□ -2.28
TARDBP-208ENST00000477447 ATP10BO94823 1461 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 CDK12Q9NYV4 1490 aaPredicted RBP0.78□□□□□ -2.28
TARDBP-208ENST00000477447 NRXN1Q9ULB1 1477 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 CDK13Q14004 1512 aaKnown RBP0.78□□□□□ -2.28
TARDBP-208ENST00000477447 UNC13BO14795 1591 aa0.78□□□□□ -2.29
TARDBP-208ENST00000477447 ABCA8O94911 1581 aa0.78□□□□□ -2.29
TARDBP-208ENST00000477447 TMEM131LA2VDJ0 1609 aa0.78□□□□□ -2.29
TARDBP-208ENST00000477447 SHROOM2Q13796 1616 aa0.78□□□□□ -2.29
TARDBP-208ENST00000477447 AKAP12Q02952 1782 aa0.78□□□□□ -2.29
TARDBP-208ENST00000477447 KIF13BQ9NQT8 1826 aa0.78□□□□□ -2.29
TARDBP-208ENST00000477447 CPAMD8Q8IZJ3 1885 aa0.78□□□□□ -2.29
TARDBP-208ENST00000477447 SCN10AQ9Y5Y9 1956 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 INTS1Q8N201 2190 aaKnown RBP0.77□□□□□ -2.29
TARDBP-208ENST00000477447 TRAV22A0A0B4J277 110 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 TRBV10-3A0A0K0K1G6 114 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 CLPSL1A2RUU4 121 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 CRYM-AS1A6NIL9 109 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 C2orf70A6NJV1 201 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 C10orf142B7Z368 130 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 F2Z2F3 143 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 H3BUT2 72 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 NDUFC1O43677 76 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 ERC2-IT1O76042 136 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 SIX6O95475 246 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 PRB4P10163 310 aaPredicted RBP0.77□□□□□ -2.29
TARDBP-208ENST00000477447 UBE2D1P51668 147 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 HMGN3Q15651 99 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 CSAG1Q6PB30 78 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 CYP2G1PQ6ZSU1 146 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 NDUFA11Q86Y39 141 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 FAM223AQ8IWN6 122 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 SPTSSBQ8NFR3 76 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 TMEM254Q8TBM7 123 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 NXT2Q9NPJ8 142 aaKnown RBP0.77□□□□□ -2.29
TARDBP-208ENST00000477447 CDC42SE2Q9NRR3 84 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 CUX1P39880 1505 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 UGGT2Q9NYU1 1516 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 CFAP74Q9C0B2 1584 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 SETBP1Q9Y6X0 1596 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 TET3O43151 1660 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 USP54Q70EL1 1684 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 UBR2Q8IWV8 1755 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 RALGAPA2Q2PPJ7 1873 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 PTPRSQ13332 1948 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 MYH2Q9UKX2 1941 aa0.77□□□□□ -2.29
TARDBP-208ENST00000477447 PLXND1Q9Y4D7 1925 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 DOCK5Q9H7D0 1870 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 PSME4Q14997 1843 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 VIRMAQ69YN4 1812 aaKnown RBP0.76□□□□□ -2.29
TARDBP-208ENST00000477447 WNK3Q9BYP7 1800 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 ARAP2Q8WZ64 1704 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 TOPAZ1Q8N9V7 1692 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 LRP5O75197 1615 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 MADDQ8WXG6 1647 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 INO80Q9ULG1 1556 aaPredicted RBP0.76□□□□□ -2.29
TARDBP-208ENST00000477447 ABCC1P33527 1531 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 IQSEC2Q5JU85 1478 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 C1orf167Q5SNV9 1468 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 LRRC9Q6ZRR7 1453 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 TRBV7-3A0A075B6L6 115 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 TRAV12-3A0A0B4J271 114 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 PIGBOS1A0A0B4J2F0 54 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 TEX49A0A1B0GTD5 131 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 BCE1O60756 84 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 IGHV3-33P01772 117 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 TFF1P04155 84 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 SNRPFP62306 86 aaKnown RBP0.76□□□□□ -2.29
TARDBP-208ENST00000477447 GNGT1P63211 74 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 SPATA45Q537H7 98 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 C1orf137Q5JT78 98 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 IFI27L1Q96BM0 104 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 SNURFQ9Y675 71 aa0.76□□□□□ -2.29
TARDBP-208ENST00000477447 ANKRD31Q8N7Z5 1873 aa0.75□□□□□ -2.29
TARDBP-208ENST00000477447 CHD1O14646 1710 aa0.75□□□□□ -2.29
TARDBP-208ENST00000477447 MON2Q7Z3U7 1717 aa0.75□□□□□ -2.29
TARDBP-208ENST00000477447 KIF14Q15058 1648 aa0.75□□□□□ -2.29
TARDBP-208ENST00000477447 DIP2CQ9Y2E4 1556 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms