RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 MGPP08493 103 aa11.81□□□□□ -0.52
SMARCD3-210ENST00000477169 NEGR1Q7Z3B1 354 aa11.81□□□□□ -0.52
SMARCD3-210ENST00000477169 DPH3P1Q9H4G8 78 aa11.81□□□□□ -0.52
SMARCD3-210ENST00000477169 CARHSP1Q9Y2V2 147 aaKnown RBP11.81□□□□□ -0.52
SMARCD3-210ENST00000477169 LINC00694P0DN24 101 aa11.8□□□□□ -0.52
SMARCD3-210ENST00000477169 TRBV10-1A0A0K0K1A3 114 aa11.79□□□□□ -0.52
SMARCD3-210ENST00000477169 GAGE12JA6NER3 117 aa11.79□□□□□ -0.52
SMARCD3-210ENST00000477169 BTF3P20290 206 aaKnown RBP11.79□□□□□ -0.52
SMARCD3-210ENST00000477169 GAGE1Q13065 139 aa11.79□□□□□ -0.52
SMARCD3-210ENST00000477169 GAGE4Q13068 117 aa11.79□□□□□ -0.52
SMARCD3-210ENST00000477169 GAGE5Q13069 117 aa11.79□□□□□ -0.52
SMARCD3-210ENST00000477169 RIGQ13278 110 aa11.79□□□□□ -0.52
SMARCD3-210ENST00000477169 GAGE13Q4V321 117 aa11.79□□□□□ -0.52
SMARCD3-210ENST00000477169 LYPD5Q6UWN5 251 aa11.79□□□□□ -0.52
SMARCD3-210ENST00000477169 SMIM15Q7Z3B0 74 aa11.79□□□□□ -0.52
SMARCD3-210ENST00000477169 SH2D6Q7Z4S9 175 aa11.79□□□□□ -0.52
SMARCD3-210ENST00000477169 KRTAP1-5Q9BYS1 174 aa11.79□□□□□ -0.52
SMARCD3-210ENST00000477169 SUMO4Q6EEV6 95 aa11.78□□□□□ -0.52
SMARCD3-210ENST00000477169 M0QY20 66 aa11.77□□□□□ -0.53
SMARCD3-210ENST00000477169 NEXN-AS1Q8NBZ9 246 aa11.77□□□□□ -0.53
SMARCD3-210ENST00000477169 C16orf90A8MZG2 172 aa11.76□□□□□ -0.53
SMARCD3-210ENST00000477169 RPL36AP83881 106 aaKnown RBP11.76□□□□□ -0.53
SMARCD3-210ENST00000477169 SLC7A5P1Q8MH63 180 aa11.76□□□□□ -0.53
SMARCD3-210ENST00000477169 ATP6V0E2Q8NHE4 81 aa11.76□□□□□ -0.53
SMARCD3-210ENST00000477169 RPL36ALQ969Q0 106 aaKnown RBP11.76□□□□□ -0.53
SMARCD3-210ENST00000477169 CTDSP1Q9GZU7 261 aa11.76□□□□□ -0.53
SMARCD3-210ENST00000477169 TMEM191AQ9H0A3 160 aa11.76□□□□□ -0.53
SMARCD3-210ENST00000477169 TRBV7-3A0A075B6L6 115 aa11.75□□□□□ -0.53
SMARCD3-210ENST00000477169 TIRAPP58753 221 aa11.75□□□□□ -0.53
SMARCD3-210ENST00000477169 CLRN3Q8NCR9 226 aa11.75□□□□□ -0.53
SMARCD3-210ENST00000477169 LRP1BQ9NZR2 4599 aa11.74□□□□□ -0.53
SMARCD3-210ENST00000477169 A0A1B0GW15 77 aa11.74□□□□□ -0.53
SMARCD3-210ENST00000477169 A0A1B0GXF2 115 aa11.74□□□□□ -0.53
SMARCD3-210ENST00000477169 H7C1H1 209 aa11.74□□□□□ -0.53
SMARCD3-210ENST00000477169 SIVA1O15304 175 aa11.74□□□□□ -0.53
SMARCD3-210ENST00000477169 UBE2D3P61077 147 aa11.74□□□□□ -0.53
SMARCD3-210ENST00000477169 UBE2D2P62837 147 aa11.74□□□□□ -0.53
SMARCD3-210ENST00000477169 MRPL54Q6P161 138 aaKnown RBP11.74□□□□□ -0.53
SMARCD3-210ENST00000477169 GATD1Q8NB37 220 aa11.74□□□□□ -0.53
SMARCD3-210ENST00000477169 GTSF1LQ9H1H1 148 aa11.74□□□□□ -0.53
SMARCD3-210ENST00000477169 TRAV26-2A0A0B4J265 109 aa11.73□□□□□ -0.53
SMARCD3-210ENST00000477169 C7orf77A4D0Y5 90 aa11.73□□□□□ -0.53
SMARCD3-210ENST00000477169 APOC3P02656 99 aa11.73□□□□□ -0.53
SMARCD3-210ENST00000477169 RASL11AQ6T310 242 aa11.73□□□□□ -0.53
SMARCD3-210ENST00000477169 RNF185Q96GF1 192 aa11.73□□□□□ -0.53
SMARCD3-210ENST00000477169 CAMPP49913 170 aa11.72□□□□□ -0.53
SMARCD3-210ENST00000477169 HBBP68871 147 aa11.72□□□□□ -0.53
SMARCD3-210ENST00000477169 RHEBQ15382 184 aa11.72□□□□□ -0.53
SMARCD3-210ENST00000477169 AMN1Q8IY45 258 aa11.72□□□□□ -0.53
SMARCD3-210ENST00000477169 DNAJC30Q96LL9 226 aa11.72□□□□□ -0.53
SMARCD3-210ENST00000477169 IMMP2LQ96T52 175 aa11.72□□□□□ -0.53
SMARCD3-210ENST00000477169 ABCA13Q86UQ4 5058 aa11.71□□□□□ -0.53
SMARCD3-210ENST00000477169 A0A087WWC5 75 aa11.71□□□□□ -0.53
SMARCD3-210ENST00000477169 CDK2AP2O75956 126 aa11.71□□□□□ -0.53
SMARCD3-210ENST00000477169 RAB4AP20338 218 aa11.71□□□□□ -0.53
SMARCD3-210ENST00000477169 NDUFA5Q16718 116 aa11.71□□□□□ -0.53
SMARCD3-210ENST00000477169 ATP5L2Q7Z4Y8 100 aa11.71□□□□□ -0.53
SMARCD3-210ENST00000477169 SPATA12Q7Z6I5 190 aa11.71□□□□□ -0.53
SMARCD3-210ENST00000477169 NIT2Q9NQR4 276 aa11.71□□□□□ -0.53
SMARCD3-210ENST00000477169 TMEM242Q9NWH2 141 aa11.71□□□□□ -0.53
SMARCD3-210ENST00000477169 TNFRSF18Q9Y5U5 241 aa11.71□□□□□ -0.53
SMARCD3-210ENST00000477169 LELP1Q5T871 98 aa11.7□□□□□ -0.54
SMARCD3-210ENST00000477169 FAM104BQ5XKR9 115 aa11.7□□□□□ -0.54
SMARCD3-210ENST00000477169 FRZBQ92765 325 aa11.7□□□□□ -0.54
SMARCD3-210ENST00000477169 BTF3L4Q96K17 158 aa11.7□□□□□ -0.54
SMARCD3-210ENST00000477169 RPS10P5Q9NQ39 176 aa11.7□□□□□ -0.54
SMARCD3-210ENST00000477169 HSPG2P98160 4391 aa11.7□□□□□ -0.54
SMARCD3-210ENST00000477169 GAS8-AS1O95177 125 aa11.69□□□□□ -0.54
SMARCD3-210ENST00000477169 S100A8P05109 93 aa11.69□□□□□ -0.54
SMARCD3-210ENST00000477169 WFDC10BQ8IUB3 73 aa11.69□□□□□ -0.54
SMARCD3-210ENST00000477169 SVBPQ8N300 66 aa11.69□□□□□ -0.54
SMARCD3-210ENST00000477169 RPL39LQ96EH5 51 aaKnown RBP11.69□□□□□ -0.54
SMARCD3-210ENST00000477169 DNAH5Q8TE73 4624 aa11.68□□□□□ -0.54
SMARCD3-210ENST00000477169 IGHV3-38A0A0C4DH36 116 aa11.68□□□□□ -0.54
SMARCD3-210ENST00000477169 SNAPINO95295 136 aa11.68□□□□□ -0.54
SMARCD3-210ENST00000477169 KCNIP4Q6PIL6 250 aa11.68□□□□□ -0.54
SMARCD3-210ENST00000477169 MRAP2Q96G30 205 aa11.68□□□□□ -0.54
SMARCD3-210ENST00000477169 MRPL51Q4U2R6 128 aaKnown RBP11.67□□□□□ -0.54
SMARCD3-210ENST00000477169 Q6ZRN7 208 aaPredicted RBP11.67□□□□□ -0.54
SMARCD3-210ENST00000477169 DAZ4Q86SG3 579 aaKnown RBP11.67□□□□□ -0.54
SMARCD3-210ENST00000477169 DAZ3Q9NR90 486 aaKnown RBP11.67□□□□□ -0.54
SMARCD3-210ENST00000477169 TRAV9-1A0A075B6T8 112 aa11.66□□□□□ -0.54
SMARCD3-210ENST00000477169 TRAV9-2A0A087WT02 112 aa11.66□□□□□ -0.54
SMARCD3-210ENST00000477169 TRAV8-6A0A0B4J262 113 aa11.66□□□□□ -0.54
SMARCD3-210ENST00000477169 SMKR1H3BMG3 65 aa11.66□□□□□ -0.54
SMARCD3-210ENST00000477169 K7EP13 123 aa11.66□□□□□ -0.54
SMARCD3-210ENST00000477169 OR10J3Q5JRS4 329 aa11.66□□□□□ -0.54
SMARCD3-210ENST00000477169 URGCP-MRPS24S4R325 110 aa11.66□□□□□ -0.54
SMARCD3-210ENST00000477169 NCR2O95944 276 aa11.65□□□□□ -0.54
SMARCD3-210ENST00000477169 S100PP25815 95 aa11.65□□□□□ -0.54
SMARCD3-210ENST00000477169 RPS10P46783 165 aaKnown RBP11.65□□□□□ -0.54
SMARCD3-210ENST00000477169 KRTAP10-2P60368 255 aa11.65□□□□□ -0.54
SMARCD3-210ENST00000477169 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.65□□□□□ -0.54
SMARCD3-210ENST00000477169 TRBV6-8A0A0A6YYG3 113 aa11.64□□□□□ -0.55
SMARCD3-210ENST00000477169 TRBV6-5A0A0K0K1A5 114 aa11.64□□□□□ -0.55
SMARCD3-210ENST00000477169 DNAH10OSP0CZ25 163 aa11.64□□□□□ -0.55
SMARCD3-210ENST00000477169 NTM-AS1Q6ZSK4 140 aa11.64□□□□□ -0.55
SMARCD3-210ENST00000477169 NFE4Q86UQ8 179 aa11.64□□□□□ -0.55
SMARCD3-210ENST00000477169 KRTAP4-5Q9BYR2 181 aa11.64□□□□□ -0.55
SMARCD3-210ENST00000477169 APOBP04114 4563 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms