RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 NUDT11Q96G61 164 aa10.87□□□□□ -0.67
COL1A1-205ENST00000476387 RPP21Q9H633 154 aaKnown RBP10.87□□□□□ -0.67
COL1A1-205ENST00000476387 K7EN84 100 aa10.86□□□□□ -0.67
COL1A1-205ENST00000476387 TRGC1P0CF51 173 aa10.86□□□□□ -0.67
COL1A1-205ENST00000476387 KCNIP4Q6PIL6 250 aa10.86□□□□□ -0.67
COL1A1-205ENST00000476387 LYZL1Q6UWQ5 148 aa10.86□□□□□ -0.67
COL1A1-205ENST00000476387 RNASE7Q9H1E1 156 aaKnown RBP10.86□□□□□ -0.67
COL1A1-205ENST00000476387 H7C1H1 209 aa10.85□□□□□ -0.67
COL1A1-205ENST00000476387 FUSP35637 526 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL1A1-205ENST00000476387 Q8N3U1 123 aa10.85□□□□□ -0.67
COL1A1-205ENST00000476387 FAM210AQ96ND0 272 aa10.85□□□□□ -0.67
COL1A1-205ENST00000476387 KIF25-AS1Q9Y6Z4 181 aa10.85□□□□□ -0.67
COL1A1-205ENST00000476387 A0A087WX48 190 aa10.84□□□□□ -0.67
COL1A1-205ENST00000476387 CTRLP40313 264 aa10.84□□□□□ -0.67
COL1A1-205ENST00000476387 DAZ4Q86SG3 579 aaKnown RBP10.84□□□□□ -0.67
COL1A1-205ENST00000476387 NIT1Q86X76 327 aa10.84□□□□□ -0.67
COL1A1-205ENST00000476387 SMIM7Q9BQ49 75 aa10.84□□□□□ -0.67
COL1A1-205ENST00000476387 TM2D2Q9BX73 214 aa10.84□□□□□ -0.67
COL1A1-205ENST00000476387 DAZ3Q9NR90 486 aaKnown RBP10.84□□□□□ -0.67
COL1A1-205ENST00000476387 TRAV8-3A0A0A6YYJ7 113 aa10.83□□□□□ -0.68
COL1A1-205ENST00000476387 NDUFS6O75380 124 aaKnown RBP10.83□□□□□ -0.68
COL1A1-205ENST00000476387 XGP55808 180 aa10.83□□□□□ -0.68
COL1A1-205ENST00000476387 CHCHD7Q9BUK0 85 aa10.83□□□□□ -0.68
COL1A1-205ENST00000476387 TRBV6-8A0A0A6YYG3 113 aa10.82□□□□□ -0.68
COL1A1-205ENST00000476387 EPM2AB3EWF7 344 aa10.82□□□□□ -0.68
COL1A1-205ENST00000476387 GATCO43716 136 aaKnown RBP10.82□□□□□ -0.68
COL1A1-205ENST00000476387 NTF3P20783 257 aa10.82□□□□□ -0.68
COL1A1-205ENST00000476387 KRTAP10-1P60331 282 aa10.82□□□□□ -0.68
COL1A1-205ENST00000476387 TMEM97Q5BJF2 176 aa10.82□□□□□ -0.68
COL1A1-205ENST00000476387 WDR73Q6P4I2 378 aa10.82□□□□□ -0.68
COL1A1-205ENST00000476387 DPH3P1Q9H4G8 78 aa10.82□□□□□ -0.68
COL1A1-205ENST00000476387 LRCOL1A6NCL2 159 aa10.81□□□□□ -0.68
COL1A1-205ENST00000476387 GCSHP23434 173 aa10.81□□□□□ -0.68
COL1A1-205ENST00000476387 ELOBQ15370 118 aa10.81□□□□□ -0.68
COL1A1-205ENST00000476387 TWIST1Q15672 202 aa10.81□□□□□ -0.68
COL1A1-205ENST00000476387 SUMO4Q6EEV6 95 aa10.81□□□□□ -0.68
COL1A1-205ENST00000476387 FAM231DQ6ZW35 169 aa10.81□□□□□ -0.68
COL1A1-205ENST00000476387 NTN5Q8WTR8 489 aaPredicted RBP10.81□□□□□ -0.68
COL1A1-205ENST00000476387 ZNF727A8MUV8 499 aa10.8□□□□□ -0.68
COL1A1-205ENST00000476387 TMEM262E9PQX1 116 aa10.8□□□□□ -0.68
COL1A1-205ENST00000476387 M0QY20 66 aa10.8□□□□□ -0.68
COL1A1-205ENST00000476387 PKIAP61925 76 aa10.8□□□□□ -0.68
COL1A1-205ENST00000476387 RMI2Q96E14 147 aa10.8□□□□□ -0.68
COL1A1-205ENST00000476387 DNAJC30Q96LL9 226 aa10.8□□□□□ -0.68
COL1A1-205ENST00000476387 CNFNQ9BYD5 112 aa10.8□□□□□ -0.68
COL1A1-205ENST00000476387 KLK12Q9UKR0 248 aa10.8□□□□□ -0.68
COL1A1-205ENST00000476387 A8MWL6 223 aa10.79□□□□□ -0.68
COL1A1-205ENST00000476387 SRP19P09132 144 aaKnown RBP10.79□□□□□ -0.68
COL1A1-205ENST00000476387 SMIM15Q7Z3B0 74 aa10.79□□□□□ -0.68
COL1A1-205ENST00000476387 CHCHD5Q9BSY4 110 aa10.79□□□□□ -0.68
COL1A1-205ENST00000476387 CT83Q5H943 113 aa10.78□□□□□ -0.68
COL1A1-205ENST00000476387 RASL11AQ6T310 242 aa10.78□□□□□ -0.68
COL1A1-205ENST00000476387 TEX261Q6UWH6 196 aa10.78□□□□□ -0.68
COL1A1-205ENST00000476387 LINC01551Q86U37 167 aa10.78□□□□□ -0.68
COL1A1-205ENST00000476387 GTSF1Q8WW33 167 aa10.78□□□□□ -0.68
COL1A1-205ENST00000476387 COX11Q9Y6N1 276 aa10.78□□□□□ -0.68
COL1A1-205ENST00000476387 TRBV25-1A0A075B6N4 114 aa10.77□□□□□ -0.69
COL1A1-205ENST00000476387 IGLV5-52A0A0A0MRZ9 124 aa10.77□□□□□ -0.69
COL1A1-205ENST00000476387 UBE2WQ96B02 151 aa10.77□□□□□ -0.69
COL1A1-205ENST00000476387 BORCS7Q96B45 105 aa10.77□□□□□ -0.69
COL1A1-205ENST00000476387 IGKV2D-24A0A075B6R9 120 aa10.76□□□□□ -0.69
COL1A1-205ENST00000476387 CRPP02741 224 aa10.76□□□□□ -0.69
COL1A1-205ENST00000476387 MPV17L2Q567V2 206 aa10.76□□□□□ -0.69
COL1A1-205ENST00000476387 Q8N814 137 aa10.76□□□□□ -0.69
COL1A1-205ENST00000476387 FRZBQ92765 325 aa10.76□□□□□ -0.69
COL1A1-205ENST00000476387 PGLYRP4Q96LB8 373 aa10.76□□□□□ -0.69
COL1A1-205ENST00000476387 TMEM70Q9BUB7 260 aa10.76□□□□□ -0.69
COL1A1-205ENST00000476387 IGHV1-24A0A0C4DH33 117 aa10.75□□□□□ -0.69
COL1A1-205ENST00000476387 Q0VG73 95 aa10.75□□□□□ -0.69
COL1A1-205ENST00000476387 FAM74A3Q4VXF1 159 aa10.75□□□□□ -0.69
COL1A1-205ENST00000476387 Q5VSD8 79 aa10.75□□□□□ -0.69
COL1A1-205ENST00000476387 C15orf54Q8N8G6 183 aa10.75□□□□□ -0.69
COL1A1-205ENST00000476387 NIT2Q9NQR4 276 aa10.75□□□□□ -0.69
COL1A1-205ENST00000476387 ANGP03950 147 aaKnown RBP10.74□□□□□ -0.69
COL1A1-205ENST00000476387 PEA15Q15121 130 aa10.74□□□□□ -0.69
COL1A1-205ENST00000476387 NTM-AS1Q6ZSK4 140 aa10.74□□□□□ -0.69
COL1A1-205ENST00000476387 OSTCQ9NRP0 149 aa10.74□□□□□ -0.69
COL1A1-205ENST00000476387 DMBT1Q9UGM3 2413 aaPredicted RBP10.74□□□□□ -0.69
COL1A1-205ENST00000476387 VPS13BQ7Z7G8 4022 aa10.74□□□□□ -0.69
COL1A1-205ENST00000476387 INAFM2P0DMQ5 153 aa10.73□□□□□ -0.69
COL1A1-205ENST00000476387 GAGE6Q13070 117 aa10.73□□□□□ -0.69
COL1A1-205ENST00000476387 IQCJQ1A5X6 159 aa10.73□□□□□ -0.69
COL1A1-205ENST00000476387 TMEM241Q24JQ0 296 aa10.73□□□□□ -0.69
COL1A1-205ENST00000476387 TSKUQ8WUA8 353 aa10.73□□□□□ -0.69
COL1A1-205ENST00000476387 C1orf43Q9BWL3 253 aa10.73□□□□□ -0.69
COL1A1-205ENST00000476387 TRAV26-2A0A0B4J265 109 aa10.72□□□□□ -0.69
COL1A1-205ENST00000476387 HIGD1CA8MV81 97 aa10.72□□□□□ -0.69
COL1A1-205ENST00000476387 LECT2O14960 151 aa10.72□□□□□ -0.69
COL1A1-205ENST00000476387 ADIRFQ15847 76 aa10.72□□□□□ -0.69
COL1A1-205ENST00000476387 ATRAIDQ6UW56 229 aa10.72□□□□□ -0.69
COL1A1-205ENST00000476387 GFRA4Q9GZZ7 299 aa10.72□□□□□ -0.69
COL1A1-205ENST00000476387 SMDT1Q9H4I9 107 aa10.72□□□□□ -0.69
COL1A1-205ENST00000476387 A0A1B0GUT8 65 aa10.71□□□□□ -0.69
COL1A1-205ENST00000476387 FAM231BA6NCW3 169 aa10.71□□□□□ -0.69
COL1A1-205ENST00000476387 FOXA3P55318 350 aaPredicted RBP10.71□□□□□ -0.69
COL1A1-205ENST00000476387 FAT1Q14517 4588 aa10.71□□□□□ -0.69
COL1A1-205ENST00000476387 Q8N976 141 aa10.71□□□□□ -0.69
COL1A1-205ENST00000476387 GATD1Q8NB37 220 aa10.71□□□□□ -0.69
COL1A1-205ENST00000476387 TMEM243Q9BU79 118 aa10.71□□□□□ -0.69
COL1A1-205ENST00000476387 NAT8Q9UHE5 227 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms