RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 DEFB4AO15263 64 aa3.8□□□□□ -1.8
CCDC39-204ENST00000476379 GFRA4Q9GZZ7 299 aa3.8□□□□□ -1.8
CCDC39-204ENST00000476379 KLF12Q9Y4X4 402 aa3.8□□□□□ -1.8
CCDC39-204ENST00000476379 TMEM238C9JI98 176 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 CRYGCP07315 174 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 TMEM30BQ3MIR4 351 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 MRPL55Q7Z7F7 128 aaKnown RBP3.79□□□□□ -1.8
CCDC39-204ENST00000476379 LINC00311Q8N616 119 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 OR9G4Q8NGQ1 327 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 A0A096LNJ9 63 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 C11orf86A6NJI1 115 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 CR1LQ2VPA4 569 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 DEFB112Q30KQ8 113 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 LGALS9BQ3B8N2 356 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 LGALS9CQ6DKI2 356 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 CEND1Q8N111 149 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 V9GYY9 64 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 TMEM238LA0A1B0GVL6 79 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 GAGE12JA6NER3 117 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 A6NJY4 79 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 INAFM1C9JVW0 142 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 H3BRM9 83 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 SIVA1O15304 175 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 PFN2P35080 140 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 GAGE4Q13068 117 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 GAGE5Q13069 117 aa3.79□□□□□ -1.8
CCDC39-204ENST00000476379 PPBPP02775 128 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 MYCNOSP40205 109 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 RPL13AP40429 203 aaKnown RBP3.78□□□□□ -1.8
CCDC39-204ENST00000476379 MRPL23Q16540 153 aaKnown RBP3.78□□□□□ -1.8
CCDC39-204ENST00000476379 Q8N8P6 123 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 GATD1Q8NB37 220 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 KAAG1Q9UBP8 84 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 MYMXA0A1B0GTQ4 84 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 GAGE12HA6NDE8 117 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 IGLL5B9A064 214 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 NXPH4O95158 308 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 TSPAN13O95857 204 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 PSMG3-AS1Q96PY0 264 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 ATP6V0BQ99437 205 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 RETNQ9HD89 108 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 DAZ1Q9NQZ3 744 aaKnown RBP3.78□□□□□ -1.8
CCDC39-204ENST00000476379 TMEM14CQ9P0S9 112 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 F8VRH5 84 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 MRGPRG-AS1Q2M3A8 158 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 ORMDL2Q53FV1 153 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 Q8N1Y9 231 aa3.78□□□□□ -1.8
CCDC39-204ENST00000476379 FAM110DQ8TAY7 271 aaPredicted RBP3.78□□□□□ -1.8
CCDC39-204ENST00000476379 CDKN1BP46527 198 aa3.78□□□□□ -1.81
CCDC39-204ENST00000476379 UBE2E1P51965 193 aa3.78□□□□□ -1.81
CCDC39-204ENST00000476379 TCTEX1D4Q5JR98 221 aa3.78□□□□□ -1.81
CCDC39-204ENST00000476379 SUMO4Q6EEV6 95 aa3.78□□□□□ -1.81
CCDC39-204ENST00000476379 SMIM20Q8N5G0 67 aa3.78□□□□□ -1.81
CCDC39-204ENST00000476379 RNF185Q96GF1 192 aa3.78□□□□□ -1.81
CCDC39-204ENST00000476379 SS18L2Q9UHA2 77 aa3.78□□□□□ -1.81
CCDC39-204ENST00000476379 IGHV1-69DA0A0B4J2H0 117 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 IGHV1-69P01742 117 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 PDE6HQ13956 83 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 RRN3P1Q2M238 152 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 C19orf54Q5BKX5 351 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 ZNRF2Q8NHG8 242 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 NTN5Q8WTR8 489 aaPredicted RBP3.77□□□□□ -1.81
CCDC39-204ENST00000476379 CLEC2BQ92478 149 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 ANAPC13Q9BS18 74 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 UBE2L6O14933 153 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 FSTL3O95633 263 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 LYPD1Q8N2G4 141 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 WFDC10AQ9H1F0 79 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 Q9UF83 564 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 ERG28Q9UKR5 140 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 WI2-2373I1.2A0A1W2PRP0 233 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 CLPSL1A2RUU4 121 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 A8MWV9 139 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 M0R1W7 72 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 NDUFA7O95182 113 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 C9orf139Q6ZV77 190 aa3.77□□□□□ -1.81
CCDC39-204ENST00000476379 A0A087WX48 190 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 SNCGO76070 127 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 GAGE7O76087 117 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 GAGE12FP0CL80 117 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 GAGE12GP0CL81 117 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 GAGE12IP0CL82 117 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 BAALCQ8WXS3 180 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 CHCHD5Q9BSY4 110 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 AKAP9Q99996 3911 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 F8W735 103 aaPredicted RBP3.76□□□□□ -1.81
CCDC39-204ENST00000476379 MINOS1Q5TGZ0 78 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 OR11H6Q8NGC7 330 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 RASL10AQ92737 203 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 DLX4Q92988 240 aaPredicted RBP3.76□□□□□ -1.81
CCDC39-204ENST00000476379 IGLV10-54A0A075B6I4 117 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 TRBV7-1A0A0A6YYK4 115 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 J3QQQ9 107 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 MSMBP08118 114 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 PLNP26678 52 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 IGHV4OR15-8A0A075B7B6 117 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 A0A087WW49 117 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 B5MCH6 92 aa3.76□□□□□ -1.81
CCDC39-204ENST00000476379 MT-ATP8P03928 68 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms