RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 LITAFQ99732 161 aa7.89□□□□□ -1.15
ABCF1-205ENST00000475993 DPM3Q9P2X0 92 aa7.89□□□□□ -1.15
ABCF1-205ENST00000475993 MAP1BP46821 2468 aaKnown RBP7.89□□□□□ -1.15
ABCF1-205ENST00000475993 TRAV21A0A0B4J279 112 aa7.89□□□□□ -1.15
ABCF1-205ENST00000475993 SIRPDQ9H106 197 aa7.89□□□□□ -1.15
ABCF1-205ENST00000475993 NACAE9PAV3 2078 aa7.88□□□□□ -1.15
ABCF1-205ENST00000475993 NXPH4O95158 308 aa7.88□□□□□ -1.15
ABCF1-205ENST00000475993 IGHV1-69P01742 117 aa7.88□□□□□ -1.15
ABCF1-205ENST00000475993 DEFB104AQ8WTQ1 72 aa7.88□□□□□ -1.15
ABCF1-205ENST00000475993 PRORYQ9H606 182 aa7.88□□□□□ -1.15
ABCF1-205ENST00000475993 ZDBF2Q9HCK1 2354 aa7.88□□□□□ -1.15
ABCF1-205ENST00000475993 IGHV3OR16-13A0A075B7E8 117 aa7.88□□□□□ -1.15
ABCF1-205ENST00000475993 TRAV8-3A0A0A6YYJ7 113 aa7.88□□□□□ -1.15
ABCF1-205ENST00000475993 IGHV3-74A0A0B4J1X5 117 aa7.88□□□□□ -1.15
ABCF1-205ENST00000475993 RNASE3P12724 160 aaKnown RBP7.88□□□□□ -1.15
ABCF1-205ENST00000475993 BSPH1Q075Z2 132 aa7.88□□□□□ -1.15
ABCF1-205ENST00000475993 PEMTQ9UBM1 199 aa7.88□□□□□ -1.15
ABCF1-205ENST00000475993 TRBV7-1A0A0A6YYK4 115 aa7.87□□□□□ -1.15
ABCF1-205ENST00000475993 PKDREJQ9NTG1 2253 aa7.87□□□□□ -1.15
ABCF1-205ENST00000475993 IGHV3-64A0A075B6Q5 118 aa7.87□□□□□ -1.15
ABCF1-205ENST00000475993 TRBV27A0A0K0K1C4 114 aa7.87□□□□□ -1.15
ABCF1-205ENST00000475993 ITLN2Q8WWU7 325 aaPredicted RBP7.87□□□□□ -1.15
ABCF1-205ENST00000475993 UPK3BQ9BT76 320 aa7.87□□□□□ -1.15
ABCF1-205ENST00000475993 WNK2Q9Y3S1 2297 aa7.87□□□□□ -1.15
ABCF1-205ENST00000475993 ARHGAP32A7KAX9 2087 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 CXCL5P42830 114 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 CDSNQ15517 529 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 C15orf32Q32M92 178 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 LINC01561Q8N1V8 128 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 SERP2Q8N6R1 65 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 CSMD1Q96PZ7 3565 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 LPAL2Q16609 132 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 SUMO4Q6EEV6 95 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 SDIM1Q6ZPB5 146 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 C20orf173Q96LM9 149 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 U3KQE9 123 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 NCOR1O75376 2440 aa7.86□□□□□ -1.15
ABCF1-205ENST00000475993 GNRH2O43555 120 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 RPL18AQ02543 176 aaKnown RBP7.85□□□□□ -1.15
ABCF1-205ENST00000475993 OPRPNQ99935 248 aaPredicted RBP7.85□□□□□ -1.15
ABCF1-205ENST00000475993 DYNLRB1Q9NP97 96 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 ZNF580Q9UK33 172 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 MUC4Q99102 2169 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 MGAQ8IWI9 3026 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 IGHV3-49A0A0A0MS15 119 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 I3L3M4 83 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 KLK9Q2XQG4 91 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 DCANP1Q8TF63 244 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 BRK1Q8WUW1 75 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 C16orf92Q96LL3 132 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 KLK9Q9UKQ9 250 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 IGHV7-81A0A0B4J1V7 117 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 TRBV6-5A0A0K0K1A5 114 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 AVPP01185 164 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 PRSS2P07478 247 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 NBL1P41271 181 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 SYNJ2BPP57105 145 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 HIST1H4AP62805 103 aaKnown RBP7.85□□□□□ -1.15
ABCF1-205ENST00000475993 CIRBPQ14011 172 aaKnown RBP7.85□□□□□ -1.15
ABCF1-205ENST00000475993 Q8N6K4 173 aa7.85□□□□□ -1.15
ABCF1-205ENST00000475993 ADAMTSL4-AS1Q5T5F5 129 aa7.84□□□□□ -1.15
ABCF1-205ENST00000475993 C9orf139Q6ZV77 190 aa7.84□□□□□ -1.15
ABCF1-205ENST00000475993 LY6G5BQ8NDX9 201 aa7.84□□□□□ -1.15
ABCF1-205ENST00000475993 CCDC140Q96MF4 163 aa7.84□□□□□ -1.15
ABCF1-205ENST00000475993 TACC2O95359 2948 aa7.84□□□□□ -1.15
ABCF1-205ENST00000475993 IGHV3-30-3P0DP02 117 aa7.84□□□□□ -1.15
ABCF1-205ENST00000475993 NPC2P61916 151 aa7.84□□□□□ -1.15
ABCF1-205ENST00000475993 Q6ZSV7 163 aa7.84□□□□□ -1.15
ABCF1-205ENST00000475993 ODF3BA8MYP8 253 aa7.83□□□□□ -1.16
ABCF1-205ENST00000475993 VMO1Q7Z5L0 202 aa7.83□□□□□ -1.16
ABCF1-205ENST00000475993 APRG1Q8IVJ8 170 aa7.83□□□□□ -1.16
ABCF1-205ENST00000475993 TMEM61Q8N0U2 210 aa7.83□□□□□ -1.16
ABCF1-205ENST00000475993 FAM110DQ8TAY7 271 aaPredicted RBP7.83□□□□□ -1.16
ABCF1-205ENST00000475993 TECTAO75443 2155 aa7.83□□□□□ -1.16
ABCF1-205ENST00000475993 A0A0J9YXV3 536 aa7.83□□□□□ -1.16
ABCF1-205ENST00000475993 FHL2Q14192 279 aa7.83□□□□□ -1.16
ABCF1-205ENST00000475993 MIAQ16674 131 aa7.83□□□□□ -1.16
ABCF1-205ENST00000475993 ADARB2-AS1A8MUL3 147 aa7.82□□□□□ -1.16
ABCF1-205ENST00000475993 CLEC19AQ6UXS0 136 aa7.82□□□□□ -1.16
ABCF1-205ENST00000475993 TPRP12270 2363 aaKnown RBP7.82□□□□□ -1.16
ABCF1-205ENST00000475993 POLEQ07864 2286 aa7.82□□□□□ -1.16
ABCF1-205ENST00000475993 TRAV12-3A0A0B4J271 114 aa7.82□□□□□ -1.16
ABCF1-205ENST00000475993 LYNX1G3V0Z9 82 aa7.82□□□□□ -1.16
ABCF1-205ENST00000475993 LYNX1P0DP58 116 aa7.82□□□□□ -1.16
ABCF1-205ENST00000475993 RNASE4P34096 147 aaKnown RBP7.82□□□□□ -1.16
ABCF1-205ENST00000475993 FAM223AQ8IWN6 122 aa7.81□□□□□ -1.16
ABCF1-205ENST00000475993 E7EQL1 145 aa7.81□□□□□ -1.16
ABCF1-205ENST00000475993 PRIMA1Q86XR5 153 aa7.81□□□□□ -1.16
ABCF1-205ENST00000475993 TIMM21Q9BVV7 248 aa7.81□□□□□ -1.16
ABCF1-205ENST00000475993 A0A087WVE0 104 aa7.81□□□□□ -1.16
ABCF1-205ENST00000475993 A0A087WWL8 130 aa7.81□□□□□ -1.16
ABCF1-205ENST00000475993 PRRC2AP48634 2157 aaKnown RBP7.8□□□□□ -1.16
ABCF1-205ENST00000475993 IGLV4-3A0A075B6K6 122 aa7.8□□□□□ -1.16
ABCF1-205ENST00000475993 IGKV3D-7A0A0C4DH55 119 aa7.8□□□□□ -1.16
ABCF1-205ENST00000475993 F5H697 171 aa7.8□□□□□ -1.16
ABCF1-205ENST00000475993 LINC00482Q8N8I6 264 aa7.8□□□□□ -1.16
ABCF1-205ENST00000475993 C20orf203Q8NBC4 194 aa7.8□□□□□ -1.16
ABCF1-205ENST00000475993 GPR179Q6PRD1 2367 aa7.8□□□□□ -1.16
ABCF1-205ENST00000475993 Q8N9W7 124 aa7.8□□□□□ -1.16
ABCF1-205ENST00000475993 SOCS3O14543 225 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms