RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 RAB4AP20338 218 aa15.32■□□□□ 0.04
MCF2L2-209ENST00000475664 ESRGQ1W209 222 aa15.32■□□□□ 0.04
MCF2L2-209ENST00000475664 RASL11AQ6T310 242 aa15.32■□□□□ 0.04
MCF2L2-209ENST00000475664 URGCP-MRPS24S4R325 110 aa15.32■□□□□ 0.04
MCF2L2-209ENST00000475664 TRAV26-2A0A0B4J265 109 aa15.31■□□□□ 0.04
MCF2L2-209ENST00000475664 RPL36AP83881 106 aaKnown RBP15.31■□□□□ 0.04
MCF2L2-209ENST00000475664 FAM104BQ5XKR9 115 aa15.31■□□□□ 0.04
MCF2L2-209ENST00000475664 ZNRF2Q8NHG8 242 aa15.31■□□□□ 0.04
MCF2L2-209ENST00000475664 FRZBQ92765 325 aa15.31■□□□□ 0.04
MCF2L2-209ENST00000475664 RPL36ALQ969Q0 106 aaKnown RBP15.31■□□□□ 0.04
MCF2L2-209ENST00000475664 LYSTQ99698 3801 aa15.3■□□□□ 0.04
MCF2L2-209ENST00000475664 TRBV7-3A0A075B6L6 115 aa15.3■□□□□ 0.04
MCF2L2-209ENST00000475664 CCL18P55774 89 aa15.3■□□□□ 0.04
MCF2L2-209ENST00000475664 LYPD5Q6UWN5 251 aa15.3■□□□□ 0.04
MCF2L2-209ENST00000475664 LINC00588Q9Y4M8 146 aa15.3■□□□□ 0.04
MCF2L2-209ENST00000475664 LCE6AA0A183 80 aa15.29■□□□□ 0.04
MCF2L2-209ENST00000475664 UBE2D3P61077 147 aa15.29■□□□□ 0.04
MCF2L2-209ENST00000475664 UBE2D2P62837 147 aa15.29■□□□□ 0.04
MCF2L2-209ENST00000475664 ATP6V0E2Q8NHE4 81 aa15.29■□□□□ 0.04
MCF2L2-209ENST00000475664 DNAJC30Q96LL9 226 aa15.29■□□□□ 0.04
MCF2L2-209ENST00000475664 UBE2DNLQ8IWF7 75 aa15.28■□□□□ 0.04
MCF2L2-209ENST00000475664 MRAP2Q96G30 205 aa15.28■□□□□ 0.04
MCF2L2-209ENST00000475664 NIT2Q9NQR4 276 aa15.28■□□□□ 0.04
MCF2L2-209ENST00000475664 GAS8-AS1O95177 125 aa15.27■□□□□ 0.04
MCF2L2-209ENST00000475664 LY6G6CO95867 125 aa15.27■□□□□ 0.04
MCF2L2-209ENST00000475664 TIRAPP58753 221 aa15.27■□□□□ 0.04
MCF2L2-209ENST00000475664 MRPL51Q4U2R6 128 aaKnown RBP15.27■□□□□ 0.04
MCF2L2-209ENST00000475664 MRPS16Q9Y3D3 137 aaKnown RBP15.27■□□□□ 0.04
MCF2L2-209ENST00000475664 SACSQ9NZJ4 4579 aa15.27■□□□□ 0.03
MCF2L2-209ENST00000475664 RPL39LQ96EH5 51 aaKnown RBP15.26■□□□□ 0.03
MCF2L2-209ENST00000475664 GTSF1LQ9H1H1 148 aa15.26■□□□□ 0.03
MCF2L2-209ENST00000475664 TNFRSF18Q9Y5U5 241 aa15.26■□□□□ 0.03
MCF2L2-209ENST00000475664 SMKR1H3BMG3 65 aa15.24■□□□□ 0.03
MCF2L2-209ENST00000475664 NCR2O95944 276 aa15.24■□□□□ 0.03
MCF2L2-209ENST00000475664 ELOBQ15370 118 aa15.24■□□□□ 0.03
MCF2L2-209ENST00000475664 TMEM136Q6ZRR5 245 aa15.24■□□□□ 0.03
MCF2L2-209ENST00000475664 UPK3BQ9BT76 320 aa15.24■□□□□ 0.03
MCF2L2-209ENST00000475664 KMT2CQ8NEZ4 4911 aaKnown RBP15.23■□□□□ 0.03
MCF2L2-209ENST00000475664 RPS10P46783 165 aaKnown RBP15.23■□□□□ 0.03
MCF2L2-209ENST00000475664 TRBV6-5A0A0K0K1A5 114 aa15.22■□□□□ 0.03
MCF2L2-209ENST00000475664 OR10J3Q5JRS4 329 aa15.22■□□□□ 0.03
MCF2L2-209ENST00000475664 DAZ4Q86SG3 579 aaKnown RBP15.22■□□□□ 0.03
MCF2L2-209ENST00000475664 YPEL4Q96NS1 127 aa15.22■□□□□ 0.03
MCF2L2-209ENST00000475664 DAZ3Q9NR90 486 aaKnown RBP15.22■□□□□ 0.03
MCF2L2-209ENST00000475664 TRBV24-1A0A075B6N3 115 aa15.21■□□□□ 0.03
MCF2L2-209ENST00000475664 TGIF2-C20orf24A0A0A6YYL0 155 aa15.21■□□□□ 0.03
MCF2L2-209ENST00000475664 IGHV3-38A0A0C4DH36 116 aa15.21■□□□□ 0.03
MCF2L2-209ENST00000475664 NRACQ8N912 160 aa15.21■□□□□ 0.03
MCF2L2-209ENST00000475664 CKS2P33552 79 aa15.2■□□□□ 0.02
MCF2L2-209ENST00000475664 LELP1Q5T871 98 aa15.2■□□□□ 0.02
MCF2L2-209ENST00000475664 CBLN2Q8IUK8 224 aa15.2■□□□□ 0.02
MCF2L2-209ENST00000475664 SMCO4Q9NRQ5 59 aa15.2■□□□□ 0.02
MCF2L2-209ENST00000475664 D6R8Y8 96 aa15.19■□□□□ 0.02
MCF2L2-209ENST00000475664 PPBPP02775 128 aa15.19■□□□□ 0.02
MCF2L2-209ENST00000475664 COX19Q49B96 90 aa15.19■□□□□ 0.02
MCF2L2-209ENST00000475664 GNB1LQ9BYB4 327 aa15.19■□□□□ 0.02
MCF2L2-209ENST00000475664 DNAH6Q9C0G6 4158 aa15.18■□□□□ 0.02
MCF2L2-209ENST00000475664 PPP1R17O96001 155 aa15.18■□□□□ 0.02
MCF2L2-209ENST00000475664 HLA-DQA1P01909 254 aa15.18■□□□□ 0.02
MCF2L2-209ENST00000475664 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.18■□□□□ 0.02
MCF2L2-209ENST00000475664 ST20Q9HBF5 79 aa15.18■□□□□ 0.02
MCF2L2-209ENST00000475664 SDHAF1A6NFY7 115 aa15.17■□□□□ 0.02
MCF2L2-209ENST00000475664 WFDC10BQ8IUB3 73 aa15.17■□□□□ 0.02
MCF2L2-209ENST00000475664 ORMDL3Q8N138 153 aa15.17■□□□□ 0.02
MCF2L2-209ENST00000475664 TMEM97Q5BJF2 176 aa15.16■□□□□ 0.02
MCF2L2-209ENST00000475664 NTM-AS1Q6ZSK4 140 aa15.16■□□□□ 0.02
MCF2L2-209ENST00000475664 TMEM70Q9BUB7 260 aa15.16■□□□□ 0.02
MCF2L2-209ENST00000475664 TRBV6-8A0A0A6YYG3 113 aa15.15■□□□□ 0.02
MCF2L2-209ENST00000475664 TNFRSF6BO95407 300 aa15.15■□□□□ 0.02
MCF2L2-209ENST00000475664 MT-ND6P03923 174 aa15.15■□□□□ 0.02
MCF2L2-209ENST00000475664 POLR2KP53803 58 aaKnown RBP15.15■□□□□ 0.02
MCF2L2-209ENST00000475664 Q9H8V8 135 aa15.15■□□□□ 0.02
MCF2L2-209ENST00000475664 TRAV8-6A0A0B4J262 113 aa15.14■□□□□ 0.01
MCF2L2-209ENST00000475664 PHOX2AO14813 284 aa15.14■□□□□ 0.01
MCF2L2-209ENST00000475664 SIVA1O15304 175 aa15.14■□□□□ 0.01
MCF2L2-209ENST00000475664 NPYP01303 97 aa15.14■□□□□ 0.01
MCF2L2-209ENST00000475664 APCSP02743 223 aa15.14■□□□□ 0.01
MCF2L2-209ENST00000475664 SUMO2P61956 95 aaKnown RBP15.14■□□□□ 0.01
MCF2L2-209ENST00000475664 PRELID3AQ96N28 172 aa15.14■□□□□ 0.01
MCF2L2-209ENST00000475664 HYDINQ4G0P3 5121 aa15.13■□□□□ 0.01
MCF2L2-209ENST00000475664 ATP6V1G1O75348 118 aa15.13■□□□□ 0.01
MCF2L2-209ENST00000475664 C20orf78Q9BR46 151 aa15.13■□□□□ 0.01
MCF2L2-209ENST00000475664 RYR2Q92736 4967 aa15.13■□□□□ 0.01
MCF2L2-209ENST00000475664 IGLV2-18A0A075B6J9 118 aa15.12■□□□□ 0.01
MCF2L2-209ENST00000475664 TRBV27A0A0K0K1C4 114 aa15.12■□□□□ 0.01
MCF2L2-209ENST00000475664 COTL1Q14019 142 aa15.12■□□□□ 0.01
MCF2L2-209ENST00000475664 LAMTOR2Q9Y2Q5 125 aa15.12■□□□□ 0.01
MCF2L2-209ENST00000475664 I3L3M4 83 aa15.11■□□□□ 0.01
MCF2L2-209ENST00000475664 DNAH10OSP0CZ25 163 aa15.11■□□□□ 0.01
MCF2L2-209ENST00000475664 RPL32P62910 135 aaKnown RBP15.11■□□□□ 0.01
MCF2L2-209ENST00000475664 IQCJQ1A5X6 159 aa15.11■□□□□ 0.01
MCF2L2-209ENST00000475664 DEFB104AQ8WTQ1 72 aa15.11■□□□□ 0.01
MCF2L2-209ENST00000475664 MRPL18Q9H0U6 180 aaKnown RBP15.11■□□□□ 0.01
MCF2L2-209ENST00000475664 KMT2AQ03164 3969 aa15.11■□□□□ 0.01
MCF2L2-209ENST00000475664 IGHV1-24A0A0C4DH33 117 aa15.1■□□□□ 0.01
MCF2L2-209ENST00000475664 PMCHP20382 165 aa15.1■□□□□ 0.01
MCF2L2-209ENST00000475664 S100A1P23297 94 aa15.1■□□□□ 0.01
MCF2L2-209ENST00000475664 KIAA1644Q3SXP7 199 aa15.1■□□□□ 0.01
MCF2L2-209ENST00000475664 TRBV25-1A0A075B6N4 114 aa15.09■□□□□ 0.01
MCF2L2-209ENST00000475664 VCYO14598 125 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms