RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 C15orf53Q8NAA6 179 aa13.24□□□□□ -0.29
CCM2-207ENST00000475551 MUC4Q99102 2169 aa13.24□□□□□ -0.29
CCM2-207ENST00000475551 CHD6Q8TD26 2715 aa13.24□□□□□ -0.29
CCM2-207ENST00000475551 H3BMM0 161 aa13.23□□□□□ -0.29
CCM2-207ENST00000475551 IGHV4-39P01824 125 aa13.23□□□□□ -0.29
CCM2-207ENST00000475551 ZNF22P17026 224 aaPredicted RBP13.23□□□□□ -0.29
CCM2-207ENST00000475551 RHOHQ15669 191 aa13.23□□□□□ -0.29
CCM2-207ENST00000475551 UNQ9165/PRO28630Q6UXU0 137 aa13.23□□□□□ -0.29
CCM2-207ENST00000475551 UBE2WQ96B02 151 aa13.23□□□□□ -0.29
CCM2-207ENST00000475551 F5H697 171 aa13.23□□□□□ -0.29
CCM2-207ENST00000475551 F6UB75 175 aa13.23□□□□□ -0.29
CCM2-207ENST00000475551 NDUFA4O00483 81 aa13.23□□□□□ -0.29
CCM2-207ENST00000475551 MRPL23Q16540 153 aaKnown RBP13.23□□□□□ -0.29
CCM2-207ENST00000475551 A0A087WWL8 130 aa13.22□□□□□ -0.29
CCM2-207ENST00000475551 MDFICQ9P1T7 246 aa13.22□□□□□ -0.29
CCM2-207ENST00000475551 KLLNB2CW77 178 aa13.22□□□□□ -0.29
CCM2-207ENST00000475551 TRIAP1O43715 76 aa13.22□□□□□ -0.29
CCM2-207ENST00000475551 FAM159AQ6UWV7 190 aa13.22□□□□□ -0.29
CCM2-207ENST00000475551 C5orf56Q8N8D9 126 aa13.22□□□□□ -0.29
CCM2-207ENST00000475551 FAM110AQ9BQ89 295 aa13.22□□□□□ -0.29
CCM2-207ENST00000475551 C19orf54Q5BKX5 351 aa13.21□□□□□ -0.29
CCM2-207ENST00000475551 ZNF462Q96JM2 2506 aa13.21□□□□□ -0.29
CCM2-207ENST00000475551 A0A0J9YXY3 114 aa13.21□□□□□ -0.29
CCM2-207ENST00000475551 C11orf71Q6IPW1 123 aa13.21□□□□□ -0.29
CCM2-207ENST00000475551 OPRPNQ99935 248 aaPredicted RBP13.21□□□□□ -0.29
CCM2-207ENST00000475551 TRAV41A0A0B4J266 112 aa13.2□□□□□ -0.3
CCM2-207ENST00000475551 GRNP28799 593 aaKnown RBP13.2□□□□□ -0.3
CCM2-207ENST00000475551 SAA4P35542 130 aa13.2□□□□□ -0.3
CCM2-207ENST00000475551 FBXL19-AS1Q494R0 122 aa13.2□□□□□ -0.3
CCM2-207ENST00000475551 ZNF256Q9Y2P7 627 aaPredicted RBP13.2□□□□□ -0.3
CCM2-207ENST00000475551 H3BT86 120 aa13.19□□□□□ -0.3
CCM2-207ENST00000475551 C2orf82Q6UX34 121 aa13.19□□□□□ -0.3
CCM2-207ENST00000475551 BEX4Q9NWD9 120 aaPredicted RBP13.19□□□□□ -0.3
CCM2-207ENST00000475551 HIVEP3Q5T1R4 2406 aa13.19□□□□□ -0.3
CCM2-207ENST00000475551 IGHV3-64A0A075B6Q5 118 aa13.18□□□□□ -0.3
CCM2-207ENST00000475551 ABCA4P78363 2273 aa13.18□□□□□ -0.3
CCM2-207ENST00000475551 H7C423 109 aa13.18□□□□□ -0.3
CCM2-207ENST00000475551 M0QY20 66 aa13.18□□□□□ -0.3
CCM2-207ENST00000475551 TRBV12-3P01733 135 aa13.18□□□□□ -0.3
CCM2-207ENST00000475551 RPL11P62913 178 aaKnown RBP13.18□□□□□ -0.3
CCM2-207ENST00000475551 C20orf203Q8NBC4 194 aa13.18□□□□□ -0.3
CCM2-207ENST00000475551 LITAFQ99732 161 aa13.18□□□□□ -0.3
CCM2-207ENST00000475551 FAM208BQ5VWN6 2430 aa13.18□□□□□ -0.3
CCM2-207ENST00000475551 ICOSQ9Y6W8 199 aa13.17□□□□□ -0.3
CCM2-207ENST00000475551 A0A0J9YXV3 536 aa13.17□□□□□ -0.3
CCM2-207ENST00000475551 FAM240AA0A1B0GVK7 77 aa13.17□□□□□ -0.3
CCM2-207ENST00000475551 IGLV4-3A0A075B6K6 122 aa13.16□□□□□ -0.3
CCM2-207ENST00000475551 DEFB121Q5J5C9 76 aa13.16□□□□□ -0.3
CCM2-207ENST00000475551 FAM74A4Q5TZK3 123 aa13.16□□□□□ -0.3
CCM2-207ENST00000475551 C9orf85Q96MD7 179 aa13.16□□□□□ -0.3
CCM2-207ENST00000475551 IGHV3-30-3P0DP02 117 aa13.15□□□□□ -0.3
CCM2-207ENST00000475551 SPANXDQ9BXN6 97 aa13.15□□□□□ -0.3
CCM2-207ENST00000475551 SPANXCQ9NY87 97 aa13.15□□□□□ -0.3
CCM2-207ENST00000475551 COX6CP09669 75 aa13.15□□□□□ -0.3
CCM2-207ENST00000475551 LINC00527Q9UJ94 153 aa13.15□□□□□ -0.3
CCM2-207ENST00000475551 ZNF580Q9UK33 172 aa13.15□□□□□ -0.3
CCM2-207ENST00000475551 ZNF56Q15929 161 aa13.14□□□□□ -0.31
CCM2-207ENST00000475551 SMIM20Q8N5G0 67 aa13.14□□□□□ -0.31
CCM2-207ENST00000475551 MOB4Q9Y3A3 225 aa13.14□□□□□ -0.31
CCM2-207ENST00000475551 TMEM95Q3KNT9 176 aa13.14□□□□□ -0.31
CCM2-207ENST00000475551 DCHS2Q6V1P9 2916 aa13.13□□□□□ -0.31
CCM2-207ENST00000475551 IGKV3-7A0A075B6H7 116 aa13.13□□□□□ -0.31
CCM2-207ENST00000475551 I3L3M4 83 aa13.13□□□□□ -0.31
CCM2-207ENST00000475551 HERV-K104P63124 156 aa13.13□□□□□ -0.31
CCM2-207ENST00000475551 RHPN1-AS1Q9BWJ2 59 aa13.13□□□□□ -0.31
CCM2-207ENST00000475551 IGHV3-16A0A0C4DH30 117 aa13.13□□□□□ -0.31
CCM2-207ENST00000475551 NPFFO15130 113 aa13.13□□□□□ -0.31
CCM2-207ENST00000475551 TIMM21Q9BVV7 248 aa13.13□□□□□ -0.31
CCM2-207ENST00000475551 TRAV12-3A0A0B4J271 114 aa13.12□□□□□ -0.31
CCM2-207ENST00000475551 TMEM219Q86XT9 240 aa13.12□□□□□ -0.31
CCM2-207ENST00000475551 USMG5Q96IX5 58 aa13.12□□□□□ -0.31
CCM2-207ENST00000475551 SPXQ9BT56 116 aa13.12□□□□□ -0.31
CCM2-207ENST00000475551 TRBV7-7A0A0K0K1E9 115 aa13.11□□□□□ -0.31
CCM2-207ENST00000475551 LST1O00453 97 aa13.11□□□□□ -0.31
CCM2-207ENST00000475551 PRSS2P07478 247 aa13.11□□□□□ -0.31
CCM2-207ENST00000475551 MRPS36P82909 103 aaKnown RBP13.11□□□□□ -0.31
CCM2-207ENST00000475551 MEIG1Q5JSS6 88 aa13.11□□□□□ -0.31
CCM2-207ENST00000475551 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
CCM2-207ENST00000475551 UBR5O95071 2799 aaPredicted RBP13.11□□□□□ -0.31
CCM2-207ENST00000475551 BRI3O95415 125 aa13.11□□□□□ -0.31
CCM2-207ENST00000475551 PLA2G2AP14555 144 aa13.11□□□□□ -0.31
CCM2-207ENST00000475551 PYGO1Q9Y3Y4 419 aa13.11□□□□□ -0.31
CCM2-207ENST00000475551 FLNCQ14315 2725 aa13.11□□□□□ -0.31
CCM2-207ENST00000475551 MIAQ16674 131 aa13.1□□□□□ -0.31
CCM2-207ENST00000475551 ADAMTSL4-AS1Q5T5F5 129 aa13.1□□□□□ -0.31
CCM2-207ENST00000475551 COL12A1Q99715 3063 aa13.1□□□□□ -0.31
CCM2-207ENST00000475551 IGHV1-58A0A0C4DH39 117 aa13.1□□□□□ -0.31
CCM2-207ENST00000475551 ADARB2-AS1A8MUL3 147 aa13.1□□□□□ -0.31
CCM2-207ENST00000475551 ID1P41134 155 aa13.1□□□□□ -0.31
CCM2-207ENST00000475551 C19orf84I3L1E1 186 aa13.09□□□□□ -0.31
CCM2-207ENST00000475551 H3BUA1 57 aa13.08□□□□□ -0.31
CCM2-207ENST00000475551 LRBAP50851 2863 aa13.08□□□□□ -0.31
CCM2-207ENST00000475551 DUX3Q96PT4 197 aa13.08□□□□□ -0.32
CCM2-207ENST00000475551 NDUFA12Q9UI09 145 aa13.08□□□□□ -0.32
CCM2-207ENST00000475551 ANKHD1Q8IWZ3 2542 aaKnown RBP13.08□□□□□ -0.32
CCM2-207ENST00000475551 CLEC2BQ92478 149 aa13.07□□□□□ -0.32
CCM2-207ENST00000475551 MYO18BQ8IUG5 2567 aa13.07□□□□□ -0.32
CCM2-207ENST00000475551 J3QKU1 62 aa13.07□□□□□ -0.32
CCM2-207ENST00000475551 IGHV3-11P01762 117 aa13.07□□□□□ -0.32
CCM2-207ENST00000475551 FAM104AQ969W3 186 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms