RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 SIX6O95475 246 aa1.56□□□□□ -2.16
TM9SF3-204ENST00000475401 ZNF818PQ6ZRF7 136 aa1.56□□□□□ -2.16
TM9SF3-204ENST00000475401 C4orf33Q8N1A6 199 aa1.56□□□□□ -2.16
TM9SF3-204ENST00000475401 TTC9CQ8N5M4 171 aa1.56□□□□□ -2.16
TM9SF3-204ENST00000475401 AQP10Q96PS8 301 aa1.56□□□□□ -2.16
TM9SF3-204ENST00000475401 NRXN2Q9P2S2 1712 aa1.56□□□□□ -2.16
TM9SF3-204ENST00000475401 AFDNP55196 1824 aaKnown RBP1.56□□□□□ -2.16
TM9SF3-204ENST00000475401 NWD2Q9ULI1 1742 aa1.55□□□□□ -2.16
TM9SF3-204ENST00000475401 HCG22E2RYF7 251 aa1.55□□□□□ -2.16
TM9SF3-204ENST00000475401 TMEM262E9PQX1 116 aa1.55□□□□□ -2.16
TM9SF3-204ENST00000475401 COMMD6Q7Z4G1 85 aa1.55□□□□□ -2.16
TM9SF3-204ENST00000475401 SPTSSBQ8NFR3 76 aa1.55□□□□□ -2.16
TM9SF3-204ENST00000475401 LINC00208Q96KT6 92 aa1.55□□□□□ -2.16
TM9SF3-204ENST00000475401 DLG5Q8TDM6 1919 aa1.55□□□□□ -2.16
TM9SF3-204ENST00000475401 PHIPQ8WWQ0 1821 aa1.54□□□□□ -2.16
TM9SF3-204ENST00000475401 FAM24AA6NFZ4 105 aa1.54□□□□□ -2.16
TM9SF3-204ENST00000475401 M0R143 59 aa1.54□□□□□ -2.16
TM9SF3-204ENST00000475401 SSSCA1O60232 199 aa1.54□□□□□ -2.16
TM9SF3-204ENST00000475401 CCL3L1P16619 93 aa1.54□□□□□ -2.16
TM9SF3-204ENST00000475401 C10orf99Q6UWK7 81 aa1.54□□□□□ -2.16
TM9SF3-204ENST00000475401 CYP2G1PQ6ZSU1 146 aa1.54□□□□□ -2.16
TM9SF3-204ENST00000475401 C10orf71Q711Q0 1435 aa1.54□□□□□ -2.16
TM9SF3-204ENST00000475401 CASKIN1Q8WXD9 1431 aa1.54□□□□□ -2.16
TM9SF3-204ENST00000475401 ABCC10Q5T3U5 1492 aa1.54□□□□□ -2.16
TM9SF3-204ENST00000475401 ARAP2Q8WZ64 1704 aa1.54□□□□□ -2.16
TM9SF3-204ENST00000475401 TRAV13-2A0A0B4J235 113 aa1.53□□□□□ -2.16
TM9SF3-204ENST00000475401 UBE2L5PA0A1B0GUS4 154 aa1.53□□□□□ -2.16
TM9SF3-204ENST00000475401 ZNF609O15014 1411 aa1.53□□□□□ -2.16
TM9SF3-204ENST00000475401 MYH8P13535 1937 aa1.53□□□□□ -2.16
TM9SF3-204ENST00000475401 UBE2L3P68036 154 aaKnown RBP1.53□□□□□ -2.16
TM9SF3-204ENST00000475401 DOCK1Q14185 1865 aa1.53□□□□□ -2.16
TM9SF3-204ENST00000475401 ZNF56Q15929 161 aa1.53□□□□□ -2.16
TM9SF3-204ENST00000475401 PARP14Q460N5 1801 aa1.53□□□□□ -2.16
TM9SF3-204ENST00000475401 NCMAPQ5T1S8 102 aa1.53□□□□□ -2.16
TM9SF3-204ENST00000475401 Q6ZQY7 126 aa1.53□□□□□ -2.16
TM9SF3-204ENST00000475401 CCL19Q99731 98 aa1.53□□□□□ -2.16
TM9SF3-204ENST00000475401 KIAA0100Q14667 2235 aaKnown RBP1.52□□□□□ -2.17
TM9SF3-204ENST00000475401 TNS1Q9HBL0 1735 aaKnown RBP1.52□□□□□ -2.17
TM9SF3-204ENST00000475401 PXDNQ92626 1479 aa1.52□□□□□ -2.17
TM9SF3-204ENST00000475401 A0A087WTM6 91 aa1.52□□□□□ -2.17
TM9SF3-204ENST00000475401 H3BQ15 152 aa1.52□□□□□ -2.17
TM9SF3-204ENST00000475401 EFNA4P52798 201 aa1.52□□□□□ -2.17
TM9SF3-204ENST00000475401 ATP5EP56381 51 aaPredicted RBP1.52□□□□□ -2.17
TM9SF3-204ENST00000475401 DCDP81605 110 aaKnown RBP1.52□□□□□ -2.17
TM9SF3-204ENST00000475401 LINC00575Q6W349 94 aa1.52□□□□□ -2.17
TM9SF3-204ENST00000475401 CYP4F30PQ9H0H9 118 aa1.52□□□□□ -2.17
TM9SF3-204ENST00000475401 TRBV7-1A0A0A6YYK4 115 aa1.51□□□□□ -2.17
TM9SF3-204ENST00000475401 MPC2O95563 127 aa1.51□□□□□ -2.17
TM9SF3-204ENST00000475401 CAV3P56539 151 aa1.51□□□□□ -2.17
TM9SF3-204ENST00000475401 ELOF1P60002 83 aaKnown RBP1.51□□□□□ -2.17
TM9SF3-204ENST00000475401 KLKP1Q107X0 134 aa1.51□□□□□ -2.17
TM9SF3-204ENST00000475401 C20orf197Q8N268 126 aa1.51□□□□□ -2.17
TM9SF3-204ENST00000475401 MED12Q93074 2177 aa1.51□□□□□ -2.17
TM9SF3-204ENST00000475401 SNRNP200O75643 2136 aaKnown RBP1.51□□□□□ -2.17
TM9SF3-204ENST00000475401 ARHGAP5Q13017 1502 aa1.5□□□□□ -2.17
TM9SF3-204ENST00000475401 SPAG17Q6Q759 2223 aa1.5□□□□□ -2.17
TM9SF3-204ENST00000475401 NCR3O14931 201 aa1.5□□□□□ -2.17
TM9SF3-204ENST00000475401 PKIAP61925 76 aa1.5□□□□□ -2.17
TM9SF3-204ENST00000475401 SSBP1Q04837 148 aaKnown RBP1.5□□□□□ -2.17
TM9SF3-204ENST00000475401 COX7B2Q8TF08 81 aa1.5□□□□□ -2.17
TM9SF3-204ENST00000475401 BET1LQ9NYM9 111 aa1.5□□□□□ -2.17
TM9SF3-204ENST00000475401 LINC00474Q9P2X8 69 aa1.5□□□□□ -2.17
TM9SF3-204ENST00000475401 LINC00312Q9Y6C7 94 aa1.5□□□□□ -2.17
TM9SF3-204ENST00000475401 CC2D2AQ9P2K1 1620 aa1.5□□□□□ -2.17
TM9SF3-204ENST00000475401 ABCA4P78363 2273 aa1.5□□□□□ -2.17
TM9SF3-204ENST00000475401 TECTAO75443 2155 aa1.49□□□□□ -2.17
TM9SF3-204ENST00000475401 LRRC37A3O60309 1634 aa1.49□□□□□ -2.17
TM9SF3-204ENST00000475401 RBAKDNA6NC62 111 aa1.49□□□□□ -2.17
TM9SF3-204ENST00000475401 S100A10P60903 97 aa1.49□□□□□ -2.17
TM9SF3-204ENST00000475401 NCOA6Q14686 2063 aaPredicted RBP1.49□□□□□ -2.17
TM9SF3-204ENST00000475401 PPIP5K1Q6PFW1 1433 aa1.49□□□□□ -2.17
TM9SF3-204ENST00000475401 TTC37Q6PGP7 1564 aa1.48□□□□□ -2.17
TM9SF3-204ENST00000475401 ARFGEF1Q9Y6D6 1849 aa1.48□□□□□ -2.17
TM9SF3-204ENST00000475401 TRBV30A0A0K0K1B3 111 aa1.48□□□□□ -2.17
TM9SF3-204ENST00000475401 PPP1R1CQ8WVI7 109 aa1.48□□□□□ -2.17
TM9SF3-204ENST00000475401 SNHG12Q9BXW3 62 aa1.48□□□□□ -2.17
TM9SF3-204ENST00000475401 AKAP12Q02952 1782 aa1.48□□□□□ -2.17
TM9SF3-204ENST00000475401 ANKRD26Q9UPS8 1709 aa1.48□□□□□ -2.17
TM9SF3-204ENST00000475401 SCAPERQ9BY12 1400 aa1.48□□□□□ -2.17
TM9SF3-204ENST00000475401 SIPA1L3O60292 1781 aaPredicted RBP1.47□□□□□ -2.17
TM9SF3-204ENST00000475401 ABCA3Q99758 1704 aa1.47□□□□□ -2.17
TM9SF3-204ENST00000475401 TEX14Q8IWB6 1497 aa1.47□□□□□ -2.17
TM9SF3-204ENST00000475401 TROQ12816 1431 aaPredicted RBP1.47□□□□□ -2.17
TM9SF3-204ENST00000475401 DOCK2Q92608 1830 aa1.47□□□□□ -2.17
TM9SF3-204ENST00000475401 MAP2P11137 1827 aaKnown RBP1.46□□□□□ -2.18
TM9SF3-204ENST00000475401 KRTAP10-4P60372 401 aaPredicted RBP1.46□□□□□ -2.18
TM9SF3-204ENST00000475401 ABCC5O15440 1437 aa1.46□□□□□ -2.18
TM9SF3-204ENST00000475401 ESPL1Q14674 2120 aa1.46□□□□□ -2.18
TM9SF3-204ENST00000475401 TET3O43151 1660 aa1.45□□□□□ -2.18
TM9SF3-204ENST00000475401 TOPAZ1Q8N9V7 1692 aa1.45□□□□□ -2.18
TM9SF3-204ENST00000475401 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.45□□□□□ -2.18
TM9SF3-204ENST00000475401 A0A096LNT2 108 aa1.45□□□□□ -2.18
TM9SF3-204ENST00000475401 EDDM3BP56851 147 aa1.45□□□□□ -2.18
TM9SF3-204ENST00000475401 FAM74A4Q5TZK3 123 aa1.45□□□□□ -2.18
TM9SF3-204ENST00000475401 Q86TA4 180 aa1.45□□□□□ -2.18
TM9SF3-204ENST00000475401 TMEM14BQ9NUH8 114 aa1.45□□□□□ -2.18
TM9SF3-204ENST00000475401 COL6A6A6NMZ7 2263 aa1.45□□□□□ -2.18
TM9SF3-204ENST00000475401 CHD1O14646 1710 aa1.44□□□□□ -2.18
TM9SF3-204ENST00000475401 FXYD1O00168 92 aa1.44□□□□□ -2.18
TM9SF3-204ENST00000475401 COL5A1-AS1Q5SY13 56 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms