RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 K7EP13 123 aa12.77□□□□□ -0.37
CCDC171-206ENST00000474193 SNAPINO95295 136 aa12.77□□□□□ -0.37
CCDC171-206ENST00000474193 EVI2AP22794 236 aa12.77□□□□□ -0.37
CCDC171-206ENST00000474193 RHEBQ15382 184 aa12.77□□□□□ -0.37
CCDC171-206ENST00000474193 CLRN3Q8NCR9 226 aa12.77□□□□□ -0.37
CCDC171-206ENST00000474193 A0A1B0GW15 77 aa12.76□□□□□ -0.37
CCDC171-206ENST00000474193 KCNIP4Q6PIL6 250 aa12.76□□□□□ -0.37
CCDC171-206ENST00000474193 RPS10P5Q9NQ39 176 aa12.76□□□□□ -0.37
CCDC171-206ENST00000474193 S100A8P05109 93 aa12.75□□□□□ -0.37
CCDC171-206ENST00000474193 NFE4Q86UQ8 179 aa12.75□□□□□ -0.37
CCDC171-206ENST00000474193 IMMP2LQ96T52 175 aa12.75□□□□□ -0.37
CCDC171-206ENST00000474193 FAT2Q9NYQ8 4349 aa12.74□□□□□ -0.37
CCDC171-206ENST00000474193 C7orf77A4D0Y5 90 aa12.74□□□□□ -0.37
CCDC171-206ENST00000474193 C16orf90A8MZG2 172 aa12.74□□□□□ -0.37
CCDC171-206ENST00000474193 H7C1H1 209 aa12.74□□□□□ -0.37
CCDC171-206ENST00000474193 EREGO14944 169 aa12.74□□□□□ -0.37
CCDC171-206ENST00000474193 S100PP25815 95 aa12.74□□□□□ -0.37
CCDC171-206ENST00000474193 Q6ZSN1 163 aa12.74□□□□□ -0.37
CCDC171-206ENST00000474193 KRTAP1-5Q9BYS1 174 aa12.74□□□□□ -0.37
CCDC171-206ENST00000474193 KIF25-AS1Q9Y6Z4 181 aa12.74□□□□□ -0.37
CCDC171-206ENST00000474193 A0A087WWC5 75 aa12.73□□□□□ -0.37
CCDC171-206ENST00000474193 TRBV10-1A0A0K0K1A3 114 aa12.73□□□□□ -0.37
CCDC171-206ENST00000474193 LINC00315P59091 139 aa12.73□□□□□ -0.37
CCDC171-206ENST00000474193 MRPL54Q6P161 138 aaKnown RBP12.73□□□□□ -0.37
CCDC171-206ENST00000474193 TMEM242Q9NWH2 141 aa12.73□□□□□ -0.37
CCDC171-206ENST00000474193 TRAV8-6A0A0B4J262 113 aa12.72□□□□□ -0.37
CCDC171-206ENST00000474193 CAMPP49913 170 aa12.72□□□□□ -0.37
CCDC171-206ENST00000474193 ATP5L2Q7Z4Y8 100 aa12.72□□□□□ -0.37
CCDC171-206ENST00000474193 C10orf126Q8N4M7 172 aa12.72□□□□□ -0.37
CCDC171-206ENST00000474193 BTF3L4Q96K17 158 aa12.72□□□□□ -0.37
CCDC171-206ENST00000474193 TMEM191AQ9H0A3 160 aa12.72□□□□□ -0.37
CCDC171-206ENST00000474193 LOC100131303A0A0U1RQF7 123 aa12.71□□□□□ -0.37
CCDC171-206ENST00000474193 GAGE12JA6NER3 117 aa12.71□□□□□ -0.37
CCDC171-206ENST00000474193 TIRAPP58753 221 aa12.71□□□□□ -0.37
CCDC171-206ENST00000474193 HBBP68871 147 aa12.71□□□□□ -0.37
CCDC171-206ENST00000474193 RPL36AP83881 106 aaKnown RBP12.71□□□□□ -0.37
CCDC171-206ENST00000474193 GAGE1Q13065 139 aa12.71□□□□□ -0.37
CCDC171-206ENST00000474193 GAGE4Q13068 117 aa12.71□□□□□ -0.37
CCDC171-206ENST00000474193 GAGE5Q13069 117 aa12.71□□□□□ -0.37
CCDC171-206ENST00000474193 GAGE13Q4V321 117 aa12.71□□□□□ -0.37
CCDC171-206ENST00000474193 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.71□□□□□ -0.37
CCDC171-206ENST00000474193 RPL36ALQ969Q0 106 aaKnown RBP12.71□□□□□ -0.37
CCDC171-206ENST00000474193 SUMO4Q6EEV6 95 aa12.69□□□□□ -0.38
CCDC171-206ENST00000474193 SPATA12Q7Z6I5 190 aa12.69□□□□□ -0.38
CCDC171-206ENST00000474193 TNFRSF18Q9Y5U5 241 aa12.69□□□□□ -0.38
CCDC171-206ENST00000474193 TRAV9-1A0A075B6T8 112 aa12.68□□□□□ -0.38
CCDC171-206ENST00000474193 OR10J3Q5JRS4 329 aa12.68□□□□□ -0.38
CCDC171-206ENST00000474193 RASL11AQ6T310 242 aa12.68□□□□□ -0.38
CCDC171-206ENST00000474193 WFDC10BQ8IUB3 73 aa12.68□□□□□ -0.38
CCDC171-206ENST00000474193 ATP6V0E2Q8NHE4 81 aa12.68□□□□□ -0.38
CCDC171-206ENST00000474193 FRZBQ92765 325 aa12.68□□□□□ -0.38
CCDC171-206ENST00000474193 PKD1P98161 4303 aa12.67□□□□□ -0.38
CCDC171-206ENST00000474193 TRBV7-3A0A075B6L6 115 aa12.67□□□□□ -0.38
CCDC171-206ENST00000474193 IGHV3-38A0A0C4DH36 116 aa12.67□□□□□ -0.38
CCDC171-206ENST00000474193 M0QY20 66 aa12.67□□□□□ -0.38
CCDC171-206ENST00000474193 DNAH10OSP0CZ25 163 aa12.67□□□□□ -0.38
CCDC171-206ENST00000474193 DNAJC30Q96LL9 226 aa12.67□□□□□ -0.38
CCDC171-206ENST00000474193 URGCP-MRPS24S4R325 110 aa12.67□□□□□ -0.38
CCDC171-206ENST00000474193 AMN1Q8IY45 258 aa12.66□□□□□ -0.38
CCDC171-206ENST00000474193 NEXN-AS1Q8NBZ9 246 aa12.66□□□□□ -0.38
CCDC171-206ENST00000474193 GTSF1LQ9H1H1 148 aa12.66□□□□□ -0.38
CCDC171-206ENST00000474193 A0A1B0GXF2 115 aa12.65□□□□□ -0.38
CCDC171-206ENST00000474193 RAB4AP20338 218 aa12.65□□□□□ -0.38
CCDC171-206ENST00000474193 FAM104BQ5XKR9 115 aa12.65□□□□□ -0.38
CCDC171-206ENST00000474193 MRAP2Q96G30 205 aa12.65□□□□□ -0.38
CCDC171-206ENST00000474193 NIT2Q9NQR4 276 aa12.65□□□□□ -0.38
CCDC171-206ENST00000474193 TRAV26-2A0A0B4J265 109 aa12.64□□□□□ -0.39
CCDC171-206ENST00000474193 LELP1Q5T871 98 aa12.64□□□□□ -0.39
CCDC171-206ENST00000474193 Q9UF83 564 aa12.64□□□□□ -0.39
CCDC171-206ENST00000474193 PPP1R17O96001 155 aa12.63□□□□□ -0.39
CCDC171-206ENST00000474193 GATD1Q8NB37 220 aa12.63□□□□□ -0.39
CCDC171-206ENST00000474193 PGPEP1Q9NXJ5 209 aa12.63□□□□□ -0.39
CCDC171-206ENST00000474193 DNAH11Q96DT5 4516 aa12.63□□□□□ -0.39
CCDC171-206ENST00000474193 PSCAO43653 123 aa12.62□□□□□ -0.39
CCDC171-206ENST00000474193 UBE2D3P61077 147 aa12.62□□□□□ -0.39
CCDC171-206ENST00000474193 UBE2D2P62837 147 aa12.62□□□□□ -0.39
CCDC171-206ENST00000474193 LINC01556Q5JQF7 62 aa12.62□□□□□ -0.39
CCDC171-206ENST00000474193 Q6ZRN7 208 aaPredicted RBP12.62□□□□□ -0.39
CCDC171-206ENST00000474193 DAZ4Q86SG3 579 aaKnown RBP12.62□□□□□ -0.39
CCDC171-206ENST00000474193 RNF185Q96GF1 192 aa12.62□□□□□ -0.39
CCDC171-206ENST00000474193 DAZ3Q9NR90 486 aaKnown RBP12.62□□□□□ -0.39
CCDC171-206ENST00000474193 LINC00694P0DN24 101 aa12.61□□□□□ -0.39
CCDC171-206ENST00000474193 CKS2P33552 79 aa12.61□□□□□ -0.39
CCDC171-206ENST00000474193 PKHD1P08F94 4074 aa12.61□□□□□ -0.39
CCDC171-206ENST00000474193 CDK2AP2O75956 126 aa12.6□□□□□ -0.39
CCDC171-206ENST00000474193 COX19Q49B96 90 aa12.6□□□□□ -0.39
CCDC171-206ENST00000474193 MRPL51Q4U2R6 128 aaKnown RBP12.6□□□□□ -0.39
CCDC171-206ENST00000474193 TMEM97Q5BJF2 176 aa12.6□□□□□ -0.39
CCDC171-206ENST00000474193 PPBPP02775 128 aa12.59□□□□□ -0.39
CCDC171-206ENST00000474193 RPL39LQ96EH5 51 aaKnown RBP12.59□□□□□ -0.39
CCDC171-206ENST00000474193 ST20Q9HBF5 79 aa12.59□□□□□ -0.39
CCDC171-206ENST00000474193 IBA57-AS1B1ANH7 110 aa12.58□□□□□ -0.4
CCDC171-206ENST00000474193 IGHV3-30P01768 117 aa12.58□□□□□ -0.4
CCDC171-206ENST00000474193 IGHV3-33P01772 117 aa12.58□□□□□ -0.4
CCDC171-206ENST00000474193 IGHV3-30-3P0DP02 117 aa12.58□□□□□ -0.4
CCDC171-206ENST00000474193 IGHV3-30-5P0DP03 117 aa12.58□□□□□ -0.4
CCDC171-206ENST00000474193 ATRAIDQ6UW56 229 aa12.58□□□□□ -0.4
CCDC171-206ENST00000474193 SMCO4Q9NRQ5 59 aa12.58□□□□□ -0.4
CCDC171-206ENST00000474193 DYNC1H1Q14204 4646 aaKnown RBP12.58□□□□□ -0.4
CCDC171-206ENST00000474193 HERC2O95714 4834 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms