RNA–Protein interactions for RNA: ENST00000472800.1

AUP1-207, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 4

Gene AUP1, Length 663 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-207ENST00000472800 SUMO4Q6EEV6 95 aa13.58□□□□□ -0.24
AUP1-207ENST00000472800 SVBPQ8N300 66 aa13.58□□□□□ -0.24
AUP1-207ENST00000472800 ATP6V0E2Q8NHE4 81 aa13.58□□□□□ -0.24
AUP1-207ENST00000472800 UPK3BQ9BT76 320 aa13.58□□□□□ -0.24
AUP1-207ENST00000472800 APOC3P02656 99 aa13.57□□□□□ -0.24
AUP1-207ENST00000472800 ZNRF2Q8NHG8 242 aa13.57□□□□□ -0.24
AUP1-207ENST00000472800 Q9UF83 564 aa13.57□□□□□ -0.24
AUP1-207ENST00000472800 MRPS16Q9Y3D3 137 aaKnown RBP13.57□□□□□ -0.24
AUP1-207ENST00000472800 SNAPINO95295 136 aa13.56□□□□□ -0.24
AUP1-207ENST00000472800 RASL11AQ6T310 242 aa13.56□□□□□ -0.24
AUP1-207ENST00000472800 SLC7A5P1Q8MH63 180 aa13.56□□□□□ -0.24
AUP1-207ENST00000472800 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.56□□□□□ -0.24
AUP1-207ENST00000472800 NEXN-AS1Q8NBZ9 246 aa13.56□□□□□ -0.24
AUP1-207ENST00000472800 BTF3L4Q96K17 158 aa13.56□□□□□ -0.24
AUP1-207ENST00000472800 KRTAP17-1Q9BYP8 105 aa13.56□□□□□ -0.24
AUP1-207ENST00000472800 GTSF1LQ9H1H1 148 aa13.56□□□□□ -0.24
AUP1-207ENST00000472800 UBE2D3P61077 147 aa13.55□□□□□ -0.24
AUP1-207ENST00000472800 UBE2D2P62837 147 aa13.55□□□□□ -0.24
AUP1-207ENST00000472800 HBBP68871 147 aa13.55□□□□□ -0.24
AUP1-207ENST00000472800 KCNIP4Q6PIL6 250 aa13.55□□□□□ -0.24
AUP1-207ENST00000472800 NIT2Q9NQR4 276 aa13.55□□□□□ -0.24
AUP1-207ENST00000472800 TRAV9-1A0A075B6T8 112 aa13.54□□□□□ -0.24
AUP1-207ENST00000472800 A0A1B0GXF2 115 aa13.54□□□□□ -0.24
AUP1-207ENST00000472800 RAB4AP20338 218 aa13.54□□□□□ -0.24
AUP1-207ENST00000472800 CAMPP49913 170 aa13.54□□□□□ -0.24
AUP1-207ENST00000472800 RPS10P5Q9NQ39 176 aa13.54□□□□□ -0.24
AUP1-207ENST00000472800 TNFRSF18Q9Y5U5 241 aa13.54□□□□□ -0.24
AUP1-207ENST00000472800 S100PP25815 95 aa13.53□□□□□ -0.24
AUP1-207ENST00000472800 MRPL54Q6P161 138 aaKnown RBP13.53□□□□□ -0.24
AUP1-207ENST00000472800 GATD1Q8NB37 220 aa13.53□□□□□ -0.24
AUP1-207ENST00000472800 MRAP2Q96G30 205 aa13.53□□□□□ -0.24
AUP1-207ENST00000472800 FAM104BQ5XKR9 115 aa13.52□□□□□ -0.25
AUP1-207ENST00000472800 DAZ4Q86SG3 579 aaKnown RBP13.52□□□□□ -0.25
AUP1-207ENST00000472800 RNF185Q96GF1 192 aa13.52□□□□□ -0.25
AUP1-207ENST00000472800 Q9H8V8 135 aa13.52□□□□□ -0.25
AUP1-207ENST00000472800 DAZ3Q9NR90 486 aaKnown RBP13.52□□□□□ -0.25
AUP1-207ENST00000472800 LELP1Q5T871 98 aa13.51□□□□□ -0.25
AUP1-207ENST00000472800 AMN1Q8IY45 258 aa13.51□□□□□ -0.25
AUP1-207ENST00000472800 PPP1R17O96001 155 aa13.5□□□□□ -0.25
AUP1-207ENST00000472800 TMEM97Q5BJF2 176 aa13.5□□□□□ -0.25
AUP1-207ENST00000472800 TRAV8-6A0A0B4J262 113 aa13.49□□□□□ -0.25
AUP1-207ENST00000472800 TRAV26-2A0A0B4J265 109 aa13.49□□□□□ -0.25
AUP1-207ENST00000472800 SIVA1O15304 175 aa13.48□□□□□ -0.25
AUP1-207ENST00000472800 VPS13DQ5THJ4 4388 aa13.47□□□□□ -0.25
AUP1-207ENST00000472800 TRBV6-5A0A0K0K1A5 114 aa13.47□□□□□ -0.25
AUP1-207ENST00000472800 MRPL51Q4U2R6 128 aaKnown RBP13.47□□□□□ -0.25
AUP1-207ENST00000472800 FRAS1Q86XX4 4008 aa13.47□□□□□ -0.25
AUP1-207ENST00000472800 K7EP13 123 aa13.46□□□□□ -0.25
AUP1-207ENST00000472800 OR10J3Q5JRS4 329 aa13.46□□□□□ -0.25
AUP1-207ENST00000472800 PPBPP02775 128 aa13.45□□□□□ -0.26
AUP1-207ENST00000472800 COX19Q49B96 90 aa13.45□□□□□ -0.26
AUP1-207ENST00000472800 TRBV6-8A0A0A6YYG3 113 aa13.44□□□□□ -0.26
AUP1-207ENST00000472800 TTC32Q5I0X7 151 aa13.44□□□□□ -0.26
AUP1-207ENST00000472800 RPL39LQ96EH5 51 aaKnown RBP13.44□□□□□ -0.26
AUP1-207ENST00000472800 ST20Q9HBF5 79 aa13.44□□□□□ -0.26
AUP1-207ENST00000472800 URGCP-MRPS24S4R325 110 aa13.44□□□□□ -0.26
AUP1-207ENST00000472800 TRAV9-2A0A087WT02 112 aa13.43□□□□□ -0.26
AUP1-207ENST00000472800 IGHV3-38A0A0C4DH36 116 aa13.43□□□□□ -0.26
AUP1-207ENST00000472800 NBDYA0A0U1RRE5 68 aa13.43□□□□□ -0.26
AUP1-207ENST00000472800 DNAH10OSP0CZ25 163 aa13.43□□□□□ -0.26
AUP1-207ENST00000472800 CKS2P33552 79 aa13.43□□□□□ -0.26
AUP1-207ENST00000472800 IGLV2-18A0A075B6J9 118 aa13.42□□□□□ -0.26
AUP1-207ENST00000472800 TRBV24-1A0A075B6N3 115 aa13.42□□□□□ -0.26
AUP1-207ENST00000472800 SDHAF1A6NFY7 115 aa13.42□□□□□ -0.26
AUP1-207ENST00000472800 Q6ZR54 194 aa13.42□□□□□ -0.26
AUP1-207ENST00000472800 WFDC10BQ8IUB3 73 aa13.42□□□□□ -0.26
AUP1-207ENST00000472800 KMT2AQ03164 3969 aa13.41□□□□□ -0.26
AUP1-207ENST00000472800 GAS8-AS1O95177 125 aa13.41□□□□□ -0.26
AUP1-207ENST00000472800 LINC01556Q5JQF7 62 aa13.41□□□□□ -0.26
AUP1-207ENST00000472800 NRACQ8N912 160 aa13.41□□□□□ -0.26
AUP1-207ENST00000472800 C20orf78Q9BR46 151 aa13.41□□□□□ -0.26
AUP1-207ENST00000472800 GNB1LQ9BYB4 327 aa13.41□□□□□ -0.26
AUP1-207ENST00000472800 I3L3M4 83 aa13.4□□□□□ -0.26
AUP1-207ENST00000472800 PHOX2AO14813 284 aa13.4□□□□□ -0.26
AUP1-207ENST00000472800 NCR2O95944 276 aa13.4□□□□□ -0.26
AUP1-207ENST00000472800 BTF3P20290 206 aaKnown RBP13.4□□□□□ -0.26
AUP1-207ENST00000472800 RPS10P46783 165 aaKnown RBP13.4□□□□□ -0.26
AUP1-207ENST00000472800 POLR2KP53803 58 aaKnown RBP13.4□□□□□ -0.26
AUP1-207ENST00000472800 PKIAP61925 76 aa13.4□□□□□ -0.26
AUP1-207ENST00000472800 COTL1Q14019 142 aa13.4□□□□□ -0.26
AUP1-207ENST00000472800 IQCJQ1A5X6 159 aa13.4□□□□□ -0.26
AUP1-207ENST00000472800 TMEM136Q6ZRR5 245 aa13.4□□□□□ -0.26
AUP1-207ENST00000472800 NTM-AS1Q6ZSK4 140 aa13.4□□□□□ -0.26
AUP1-207ENST00000472800 ORMDL3Q8N138 153 aa13.4□□□□□ -0.26
AUP1-207ENST00000472800 TMEM70Q9BUB7 260 aa13.4□□□□□ -0.26
AUP1-207ENST00000472800 DNAH6Q9C0G6 4158 aa13.39□□□□□ -0.27
AUP1-207ENST00000472800 TRBV25-1A0A075B6N4 114 aa13.39□□□□□ -0.27
AUP1-207ENST00000472800 SMKR1H3BMG3 65 aa13.39□□□□□ -0.27
AUP1-207ENST00000472800 HLA-DQA1P01909 254 aa13.39□□□□□ -0.27
AUP1-207ENST00000472800 LAMTOR2Q9Y2Q5 125 aa13.39□□□□□ -0.27
AUP1-207ENST00000472800 IGHV1-24A0A0C4DH33 117 aa13.38□□□□□ -0.27
AUP1-207ENST00000472800 TRBV27A0A0K0K1C4 114 aa13.38□□□□□ -0.27
AUP1-207ENST00000472800 D6R8Y8 96 aa13.38□□□□□ -0.27
AUP1-207ENST00000472800 M0R2N4 97 aa13.38□□□□□ -0.27
AUP1-207ENST00000472800 VCYO14598 125 aa13.38□□□□□ -0.27
AUP1-207ENST00000472800 PMCHP20382 165 aa13.38□□□□□ -0.27
AUP1-207ENST00000472800 SUMO2P61956 95 aaKnown RBP13.38□□□□□ -0.27
AUP1-207ENST00000472800 RPL32P62910 135 aaKnown RBP13.38□□□□□ -0.27
AUP1-207ENST00000472800 ELOBQ15370 118 aa13.38□□□□□ -0.27
AUP1-207ENST00000472800 ATRAIDQ6UW56 229 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 309.4 ms