RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 ZFP82Q8N141 532 aa5.24□□□□□ -1.57
USP48-207ENST00000471752 C15orf54Q8N8G6 183 aa5.24□□□□□ -1.57
USP48-207ENST00000471752 SYT8Q8NBV8 401 aa5.24□□□□□ -1.57
USP48-207ENST00000471752 OR10G8Q8NGN5 311 aa5.24□□□□□ -1.57
USP48-207ENST00000471752 CIRBP-AS1Q8TBR5 109 aa5.24□□□□□ -1.57
USP48-207ENST00000471752 NKX6-2Q9C056 277 aaPredicted RBP5.24□□□□□ -1.57
USP48-207ENST00000471752 GFRA4Q9GZZ7 299 aa5.24□□□□□ -1.57
USP48-207ENST00000471752 TRBV7-3A0A075B6L6 115 aa5.23□□□□□ -1.57
USP48-207ENST00000471752 A0A087WWC5 75 aa5.23□□□□□ -1.57
USP48-207ENST00000471752 TRBV6-8A0A0A6YYG3 113 aa5.23□□□□□ -1.57
USP48-207ENST00000471752 RHODO00212 210 aa5.23□□□□□ -1.57
USP48-207ENST00000471752 SNAI2O43623 268 aa5.23□□□□□ -1.57
USP48-207ENST00000471752 PRSS1P07477 247 aa5.23□□□□□ -1.57
USP48-207ENST00000471752 SEC11BP0C7V7 166 aa5.23□□□□□ -1.57
USP48-207ENST00000471752 RPL35P42766 123 aaKnown RBP5.23□□□□□ -1.57
USP48-207ENST00000471752 GAGE6Q13070 117 aa5.23□□□□□ -1.57
USP48-207ENST00000471752 ATRAIDQ6UW56 229 aa5.23□□□□□ -1.57
USP48-207ENST00000471752 STOML3Q8TAV4 291 aa5.23□□□□□ -1.57
USP48-207ENST00000471752 A0A087WX48 190 aa5.22□□□□□ -1.57
USP48-207ENST00000471752 F5H697 171 aa5.22□□□□□ -1.57
USP48-207ENST00000471752 BCL2L11O43521 198 aa5.22□□□□□ -1.57
USP48-207ENST00000471752 RAB4BP61018 213 aa5.22□□□□□ -1.57
USP48-207ENST00000471752 RPL36AP83881 106 aaKnown RBP5.22□□□□□ -1.57
USP48-207ENST00000471752 ZNF56Q15929 161 aa5.22□□□□□ -1.57
USP48-207ENST00000471752 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
USP48-207ENST00000471752 RPL36ALQ969Q0 106 aaKnown RBP5.22□□□□□ -1.57
USP48-207ENST00000471752 CHAC1Q9BUX1 264 aa5.22□□□□□ -1.57
USP48-207ENST00000471752 TRBV20OR9-2A0A075B6H5 130 aa5.21□□□□□ -1.58
USP48-207ENST00000471752 TRBV10-1A0A0K0K1A3 114 aa5.21□□□□□ -1.58
USP48-207ENST00000471752 HMSDA8MTL9 139 aa5.21□□□□□ -1.58
USP48-207ENST00000471752 USP17L23D6RBM5 183 aa5.21□□□□□ -1.58
USP48-207ENST00000471752 M0QY20 66 aa5.21□□□□□ -1.58
USP48-207ENST00000471752 SLPIP03973 132 aa5.21□□□□□ -1.58
USP48-207ENST00000471752 FOXA3P55318 350 aaPredicted RBP5.21□□□□□ -1.58
USP48-207ENST00000471752 RBX1P62877 108 aa5.21□□□□□ -1.58
USP48-207ENST00000471752 LINC00269Q8N2A0 174 aa5.21□□□□□ -1.58
USP48-207ENST00000471752 CHCHD5Q9BSY4 110 aa5.21□□□□□ -1.58
USP48-207ENST00000471752 TPPP3Q9BW30 176 aa5.21□□□□□ -1.58
USP48-207ENST00000471752 GNG13Q9P2W3 67 aa5.21□□□□□ -1.58
USP48-207ENST00000471752 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.21□□□□□ -1.58
USP48-207ENST00000471752 URGCP-MRPS24S4R325 110 aa5.21□□□□□ -1.58
USP48-207ENST00000471752 IGLV4-60A0A075B6I1 120 aa5.2□□□□□ -1.58
USP48-207ENST00000471752 IGLV10-54A0A075B6I4 117 aa5.2□□□□□ -1.58
USP48-207ENST00000471752 C19orf71A6NCJ1 209 aa5.2□□□□□ -1.58
USP48-207ENST00000471752 KRTAP29-1A8MX34 341 aaPredicted RBP5.2□□□□□ -1.58
USP48-207ENST00000471752 ANGP03950 147 aaKnown RBP5.2□□□□□ -1.58
USP48-207ENST00000471752 OR5AL1P0C617 328 aa5.2□□□□□ -1.58
USP48-207ENST00000471752 IGLC6P0CF74 106 aa5.2□□□□□ -1.58
USP48-207ENST00000471752 RAB5CP51148 216 aa5.2□□□□□ -1.58
USP48-207ENST00000471752 ZNF345Q14585 488 aa5.2□□□□□ -1.58
USP48-207ENST00000471752 CENPWQ5EE01 88 aa5.2□□□□□ -1.58
USP48-207ENST00000471752 TOR2AQ5JU69 321 aa5.2□□□□□ -1.58
USP48-207ENST00000471752 SPANXN1Q5VSR9 72 aa5.2□□□□□ -1.58
USP48-207ENST00000471752 SUMO4Q6EEV6 95 aa5.2□□□□□ -1.58
USP48-207ENST00000471752 DAZAP1Q96EP5 407 aaKnown RBP5.2□□□□□ -1.58
USP48-207ENST00000471752 VAX2Q9UIW0 290 aa5.2□□□□□ -1.58
USP48-207ENST00000471752 A0A0D9SG52 128 aa5.19□□□□□ -1.58
USP48-207ENST00000471752 UMAD1C9J7I0 102 aa5.19□□□□□ -1.58
USP48-207ENST00000471752 HLA-DQA1P01909 254 aa5.19□□□□□ -1.58
USP48-207ENST00000471752 NKX2-5P52952 324 aaPredicted RBP5.19□□□□□ -1.58
USP48-207ENST00000471752 LRP2P98164 4655 aa5.19□□□□□ -1.58
USP48-207ENST00000471752 LYZL1Q6UWQ5 148 aa5.19□□□□□ -1.58
USP48-207ENST00000471752 C20orf203Q8NBC4 194 aa5.19□□□□□ -1.58
USP48-207ENST00000471752 OR2D3Q8NGH3 330 aa5.19□□□□□ -1.58
USP48-207ENST00000471752 C11orf52Q96A22 123 aa5.19□□□□□ -1.58
USP48-207ENST00000471752 TCEAL7Q9BRU2 100 aa5.19□□□□□ -1.58
USP48-207ENST00000471752 TRAV26-2A0A0B4J265 109 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 KANTRA0A1W2PQU2 76 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 GAS8-AS1O95177 125 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 PLA2G1BP04054 148 aaKnown RBP5.18□□□□□ -1.58
USP48-207ENST00000471752 S100A9P06702 114 aaKnown RBP5.18□□□□□ -1.58
USP48-207ENST00000471752 MGPP08493 103 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 CXCL1P09341 107 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 ODF1Q14990 250 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 SDIM1Q6ZPB5 146 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 RMI2Q96E14 147 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 C1orf43Q9BWL3 253 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 PRR34Q9NV39 138 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 COX11Q9Y6N1 276 aa5.18□□□□□ -1.58
USP48-207ENST00000471752 RNF213Q63HN8 5207 aa5.17□□□□□ -1.58
USP48-207ENST00000471752 TRAV1-1A0A0B4J248 108 aa5.17□□□□□ -1.58
USP48-207ENST00000471752 K7EN84 100 aa5.17□□□□□ -1.58
USP48-207ENST00000471752 PFDN1O60925 122 aa5.17□□□□□ -1.58
USP48-207ENST00000471752 CHTF8P0CG12 524 aa5.17□□□□□ -1.58
USP48-207ENST00000471752 NTF3P20783 257 aa5.17□□□□□ -1.58
USP48-207ENST00000471752 FER1L6-AS1Q8NA97 138 aa5.17□□□□□ -1.58
USP48-207ENST00000471752 NUDT10Q8NFP7 164 aa5.17□□□□□ -1.58
USP48-207ENST00000471752 NUDT11Q96G61 164 aa5.17□□□□□ -1.58
USP48-207ENST00000471752 CHCHD7Q9BUK0 85 aa5.17□□□□□ -1.58
USP48-207ENST00000471752 SULT1A2P50226 295 aa5.16□□□□□ -1.58
USP48-207ENST00000471752 Q0VG73 95 aa5.16□□□□□ -1.58
USP48-207ENST00000471752 ELOBQ15370 118 aa5.16□□□□□ -1.58
USP48-207ENST00000471752 IQCJQ1A5X6 159 aa5.16□□□□□ -1.58
USP48-207ENST00000471752 C9orf163Q8N9P6 203 aa5.16□□□□□ -1.58
USP48-207ENST00000471752 GATD1Q8NB37 220 aa5.16□□□□□ -1.58
USP48-207ENST00000471752 OCC1Q8TAD7 63 aa5.16□□□□□ -1.58
USP48-207ENST00000471752 RPL39LQ96EH5 51 aaKnown RBP5.16□□□□□ -1.58
USP48-207ENST00000471752 RNASE7Q9H1E1 156 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms