RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 RPL36ALQ969Q0 106 aaKnown RBP3.39□□□□□ -1.87
SF3B1-208ENST00000470268 RCHY1Q96PM5 261 aa3.39□□□□□ -1.87
SF3B1-208ENST00000470268 C1QTNF4Q9BXJ3 329 aa3.39□□□□□ -1.87
SF3B1-208ENST00000470268 GEMIN7Q9H840 131 aaKnown RBP3.39□□□□□ -1.87
SF3B1-208ENST00000470268 NAT8BQ9UHF3 227 aa3.39□□□□□ -1.87
SF3B1-208ENST00000470268 HUWE1Q7Z6Z7 4374 aaKnown RBP3.39□□□□□ -1.87
SF3B1-208ENST00000470268 PRKDCP78527 4128 aaKnown RBP3.39□□□□□ -1.87
SF3B1-208ENST00000470268 DNAH9Q9NYC9 4486 aa3.39□□□□□ -1.87
SF3B1-208ENST00000470268 IGHV1OR15-1A0A075B7D0 117 aa3.39□□□□□ -1.87
SF3B1-208ENST00000470268 IGLV5-39A0A0G2JS06 123 aa3.39□□□□□ -1.87
SF3B1-208ENST00000470268 PLAC8L1A1L4L8 177 aa3.39□□□□□ -1.87
SF3B1-208ENST00000470268 ORM1P02763 201 aa3.39□□□□□ -1.87
SF3B1-208ENST00000470268 RNASE3P12724 160 aaKnown RBP3.39□□□□□ -1.87
SF3B1-208ENST00000470268 LINC01587Q99440 93 aa3.39□□□□□ -1.87
SF3B1-208ENST00000470268 C20orf144Q9BQM9 153 aa3.39□□□□□ -1.87
SF3B1-208ENST00000470268 OVOL2Q9BRP0 275 aa3.39□□□□□ -1.87
SF3B1-208ENST00000470268 MDFICQ9P1T7 246 aa3.39□□□□□ -1.87
SF3B1-208ENST00000470268 NBEAL2Q6ZNJ1 2754 aa3.38□□□□□ -1.87
SF3B1-208ENST00000470268 SERF1AO75920 110 aa3.38□□□□□ -1.87
SF3B1-208ENST00000470268 ARMS2P0C7Q2 107 aa3.38□□□□□ -1.87
SF3B1-208ENST00000470268 SRIP30626 198 aa3.38□□□□□ -1.87
SF3B1-208ENST00000470268 COA6Q5JTJ3 125 aaKnown RBP3.38□□□□□ -1.87
SF3B1-208ENST00000470268 FAM159AQ6UWV7 190 aa3.38□□□□□ -1.87
SF3B1-208ENST00000470268 C11orf72Q8NBR9 251 aa3.38□□□□□ -1.87
SF3B1-208ENST00000470268 OR11H2Q8NH07 326 aa3.38□□□□□ -1.87
SF3B1-208ENST00000470268 TM2D3Q9BRN9 247 aa3.38□□□□□ -1.87
SF3B1-208ENST00000470268 IGHV3-16A0A0C4DH30 117 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 A0A1B0GXF2 115 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 TMEM189A5PLL7 270 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 DEFB4AO15263 64 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 APCSP02743 223 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 IGLC6P0CF74 106 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 Q8NAQ8 132 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 LINC00467Q9BRT7 94 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 GNB1LQ9BYB4 327 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 A0A1B0GW15 77 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 H3BVH4 76 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 GAS8-AS1O95177 125 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 PMCHL1Q16048 86 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 BATFQ16520 125 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 RRN3P1Q2M238 152 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 LYZL1Q6UWQ5 148 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 FAM19A2Q8N3H0 131 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 URB1-AS1Q96HZ7 61 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 KCNS1Q96KK3 526 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 B9D2Q9BPU9 175 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 TP53TG1Q9Y2A0 90 aa3.37□□□□□ -1.87
SF3B1-208ENST00000470268 IGHV4-28A0A0C4DH34 117 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 C20orf202A1L168 122 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 A8MWL6 223 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 EMP1P54849 157 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 COL5A1-AS1Q5SY13 56 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 BAGE3Q86Y29 109 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 OR10AG1Q8NH19 301 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 TMEM263Q8WUH6 116 aaKnown RBP3.36□□□□□ -1.87
SF3B1-208ENST00000470268 C9orf85Q96MD7 179 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 MIEN1Q9BRT3 115 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 SCRT2Q9NQ03 307 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 TIMM8BQ9Y5J9 83 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-208ENST00000470268 FBN3Q75N90 2809 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 TRAV9-1A0A075B6T8 112 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 SMKR1H3BMG3 65 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 K7EP13 123 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 CCL25O15444 150 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 SNAI2O43623 268 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 MIFP14174 115 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 PMCHP20382 165 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 ASIPP42127 132 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 HBBP68871 147 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 C18orf32Q8TCD1 76 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 C16orf74Q96GX8 76 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 NOP10Q9NPE3 64 aaKnown RBP3.36□□□□□ -1.87
SF3B1-208ENST00000470268 CELA1Q9UNI1 258 aa3.36□□□□□ -1.87
SF3B1-208ENST00000470268 TENM3Q9P273 2699 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 COL7A1Q02388 2944 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 FAM231BA6NCW3 169 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 SMIM9A6NGZ8 99 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 NCR2O95944 276 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 HLA-DQA1P01909 254 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 PPBPP02775 128 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 OR5AL1P0C617 328 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 S100A4P26447 101 aaKnown RBP3.35□□□□□ -1.87
SF3B1-208ENST00000470268 CTRLP40313 264 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 RPS20P60866 119 aaKnown RBP3.35□□□□□ -1.87
SF3B1-208ENST00000470268 ZNF493Q6ZR52 646 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 Q6ZTI0 123 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 AMN1Q8IY45 258 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 NRACQ8N912 160 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 FER1L6-AS1Q8NA97 138 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 GFRA4Q9GZZ7 299 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 JPT2Q9H910 190 aa3.35□□□□□ -1.87
SF3B1-208ENST00000470268 MRPL16Q9NX20 251 aaKnown RBP3.35□□□□□ -1.87
SF3B1-208ENST00000470268 A0A0J9YWU9 116 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 A0A1B0GUT8 65 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 M0R381 172 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 NXPH4O95158 308 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 GATA1P15976 413 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-208ENST00000470268 NTF3P20783 257 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 ZNF415Q09FC8 603 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 Q0VG73 95 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms