RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 TRAV9-1A0A075B6T8 112 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 LCE6AA0A183 80 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 H7C1H1 209 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 GAS8-AS1O95177 125 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 S100A8P05109 93 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 UBE2D3P61077 147 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 UBE2D2P62837 147 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 FAM104BQ5XKR9 115 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 RASL11AQ6T310 242 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 LYPD5Q6UWN5 251 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 ZNRF2Q8NHG8 242 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 LYSTQ99698 3801 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 URGCP-MRPS24S4R325 110 aa7.28□□□□□ -1.24
SMC1A-206ENST00000470241 TRBV7-3A0A075B6L6 115 aa7.27□□□□□ -1.25
SMC1A-206ENST00000470241 LY6G6CO95867 125 aa7.27□□□□□ -1.25
SMC1A-206ENST00000470241 S100PP25815 95 aa7.27□□□□□ -1.25
SMC1A-206ENST00000470241 CCL18P55774 89 aa7.27□□□□□ -1.25
SMC1A-206ENST00000470241 RPL36AP83881 106 aaKnown RBP7.27□□□□□ -1.25
SMC1A-206ENST00000470241 SH2D6Q7Z4S9 175 aa7.27□□□□□ -1.25
SMC1A-206ENST00000470241 ATP6V0E2Q8NHE4 81 aa7.27□□□□□ -1.25
SMC1A-206ENST00000470241 RPL36ALQ969Q0 106 aaKnown RBP7.27□□□□□ -1.25
SMC1A-206ENST00000470241 TENM2Q9NT68 2774 aa7.27□□□□□ -1.25
SMC1A-206ENST00000470241 TIRAPP58753 221 aa7.26□□□□□ -1.25
SMC1A-206ENST00000470241 MRPL51Q4U2R6 128 aaKnown RBP7.26□□□□□ -1.25
SMC1A-206ENST00000470241 UBE2DNLQ8IWF7 75 aa7.26□□□□□ -1.25
SMC1A-206ENST00000470241 FRZBQ92765 325 aa7.26□□□□□ -1.25
SMC1A-206ENST00000470241 RPL39LQ96EH5 51 aaKnown RBP7.26□□□□□ -1.25
SMC1A-206ENST00000470241 MRAP2Q96G30 205 aa7.26□□□□□ -1.25
SMC1A-206ENST00000470241 DNAJC30Q96LL9 226 aa7.26□□□□□ -1.25
SMC1A-206ENST00000470241 GTSF1LQ9H1H1 148 aa7.26□□□□□ -1.25
SMC1A-206ENST00000470241 NIT2Q9NQR4 276 aa7.26□□□□□ -1.25
SMC1A-206ENST00000470241 MRPS16Q9Y3D3 137 aaKnown RBP7.26□□□□□ -1.25
SMC1A-206ENST00000470241 SMKR1H3BMG3 65 aa7.25□□□□□ -1.25
SMC1A-206ENST00000470241 NCR2O95944 276 aa7.25□□□□□ -1.25
SMC1A-206ENST00000470241 RPS10P46783 165 aaKnown RBP7.25□□□□□ -1.25
SMC1A-206ENST00000470241 UPK3BQ9BT76 320 aa7.25□□□□□ -1.25
SMC1A-206ENST00000470241 TNFRSF18Q9Y5U5 241 aa7.25□□□□□ -1.25
SMC1A-206ENST00000470241 RYR2Q92736 4967 aa7.25□□□□□ -1.25
SMC1A-206ENST00000470241 TGIF2-C20orf24A0A0A6YYL0 155 aa7.24□□□□□ -1.25
SMC1A-206ENST00000470241 IGHV3-38A0A0C4DH36 116 aa7.24□□□□□ -1.25
SMC1A-206ENST00000470241 TRBV6-5A0A0K0K1A5 114 aa7.24□□□□□ -1.25
SMC1A-206ENST00000470241 ELOBQ15370 118 aa7.24□□□□□ -1.25
SMC1A-206ENST00000470241 TMEM136Q6ZRR5 245 aa7.24□□□□□ -1.25
SMC1A-206ENST00000470241 NRACQ8N912 160 aa7.24□□□□□ -1.25
SMC1A-206ENST00000470241 YPEL4Q96NS1 127 aa7.24□□□□□ -1.25
SMC1A-206ENST00000470241 HYDINQ4G0P3 5121 aa7.23□□□□□ -1.25
SMC1A-206ENST00000470241 OR10J3Q5JRS4 329 aa7.23□□□□□ -1.25
SMC1A-206ENST00000470241 DAZ4Q86SG3 579 aaKnown RBP7.23□□□□□ -1.25
SMC1A-206ENST00000470241 DAZ3Q9NR90 486 aaKnown RBP7.23□□□□□ -1.25
SMC1A-206ENST00000470241 DNAH6Q9C0G6 4158 aa7.23□□□□□ -1.25
SMC1A-206ENST00000470241 TRBV24-1A0A075B6N3 115 aa7.22□□□□□ -1.25
SMC1A-206ENST00000470241 D6R8Y8 96 aa7.22□□□□□ -1.25
SMC1A-206ENST00000470241 CKS2P33552 79 aa7.22□□□□□ -1.25
SMC1A-206ENST00000470241 LELP1Q5T871 98 aa7.22□□□□□ -1.25
SMC1A-206ENST00000470241 NTM-AS1Q6ZSK4 140 aa7.22□□□□□ -1.25
SMC1A-206ENST00000470241 CBLN2Q8IUK8 224 aa7.22□□□□□ -1.25
SMC1A-206ENST00000470241 GNB1LQ9BYB4 327 aa7.22□□□□□ -1.25
SMC1A-206ENST00000470241 SMCO4Q9NRQ5 59 aa7.22□□□□□ -1.25
SMC1A-206ENST00000470241 KMT2AQ03164 3969 aa7.21□□□□□ -1.26
SMC1A-206ENST00000470241 SDHAF1A6NFY7 115 aa7.21□□□□□ -1.26
SMC1A-206ENST00000470241 PPBPP02775 128 aa7.21□□□□□ -1.26
SMC1A-206ENST00000470241 POLR2KP53803 58 aaKnown RBP7.21□□□□□ -1.26
SMC1A-206ENST00000470241 WFDC10BQ8IUB3 73 aa7.21□□□□□ -1.26
SMC1A-206ENST00000470241 TMEM70Q9BUB7 260 aa7.21□□□□□ -1.26
SMC1A-206ENST00000470241 Q9H8V8 135 aa7.21□□□□□ -1.26
SMC1A-206ENST00000470241 ST20Q9HBF5 79 aa7.21□□□□□ -1.26
SMC1A-206ENST00000470241 RYR3Q15413 4870 aa7.21□□□□□ -1.26
SMC1A-206ENST00000470241 IGLV2-18A0A075B6J9 118 aa7.2□□□□□ -1.26
SMC1A-206ENST00000470241 TRBV6-8A0A0A6YYG3 113 aa7.2□□□□□ -1.26
SMC1A-206ENST00000470241 TRAV8-6A0A0B4J262 113 aa7.2□□□□□ -1.26
SMC1A-206ENST00000470241 SIVA1O15304 175 aa7.2□□□□□ -1.26
SMC1A-206ENST00000470241 TNFRSF6BO95407 300 aa7.2□□□□□ -1.26
SMC1A-206ENST00000470241 PPP1R17O96001 155 aa7.2□□□□□ -1.26
SMC1A-206ENST00000470241 NPYP01303 97 aa7.2□□□□□ -1.26
SMC1A-206ENST00000470241 HLA-DQA1P01909 254 aa7.2□□□□□ -1.26
SMC1A-206ENST00000470241 SUMO2P61956 95 aaKnown RBP7.2□□□□□ -1.26
SMC1A-206ENST00000470241 COX19Q49B96 90 aa7.2□□□□□ -1.26
SMC1A-206ENST00000470241 ORMDL3Q8N138 153 aa7.2□□□□□ -1.26
SMC1A-206ENST00000470241 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-206ENST00000470241 DEFB104AQ8WTQ1 72 aa7.2□□□□□ -1.26
SMC1A-206ENST00000470241 DNAH2Q9P225 4427 aa7.19□□□□□ -1.26
SMC1A-206ENST00000470241 I3L3M4 83 aa7.19□□□□□ -1.26
SMC1A-206ENST00000470241 PHOX2AO14813 284 aa7.19□□□□□ -1.26
SMC1A-206ENST00000470241 APCSP02743 223 aa7.19□□□□□ -1.26
SMC1A-206ENST00000470241 KIAA1644Q3SXP7 199 aa7.19□□□□□ -1.26
SMC1A-206ENST00000470241 TMEM97Q5BJF2 176 aa7.19□□□□□ -1.26
SMC1A-206ENST00000470241 PRELID3AQ96N28 172 aa7.19□□□□□ -1.26
SMC1A-206ENST00000470241 C20orf78Q9BR46 151 aa7.19□□□□□ -1.26
SMC1A-206ENST00000470241 TRBV27A0A0K0K1C4 114 aa7.18□□□□□ -1.26
SMC1A-206ENST00000470241 ATP6V1G1O75348 118 aa7.18□□□□□ -1.26
SMC1A-206ENST00000470241 SCO1O75880 301 aa7.18□□□□□ -1.26
SMC1A-206ENST00000470241 MT-ND6P03923 174 aa7.18□□□□□ -1.26
SMC1A-206ENST00000470241 DNAH10OSP0CZ25 163 aa7.18□□□□□ -1.26
SMC1A-206ENST00000470241 PMCHP20382 165 aa7.18□□□□□ -1.26
SMC1A-206ENST00000470241 RPL32P62910 135 aaKnown RBP7.18□□□□□ -1.26
SMC1A-206ENST00000470241 COTL1Q14019 142 aa7.18□□□□□ -1.26
SMC1A-206ENST00000470241 IQCJQ1A5X6 159 aa7.18□□□□□ -1.26
SMC1A-206ENST00000470241 Q6ZR54 194 aa7.18□□□□□ -1.26
SMC1A-206ENST00000470241 KRTAP1-5Q9BYS1 174 aa7.18□□□□□ -1.26
SMC1A-206ENST00000470241 MRPL18Q9H0U6 180 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms