RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 TNFRSF18Q9Y5U5 241 aa8.74□□□□□ -1.01
SPTLC1-204ENST00000469778 LINC00694P0DN24 101 aa8.73□□□□□ -1.01
SPTLC1-204ENST00000469778 SUMO4Q6EEV6 95 aa8.73□□□□□ -1.01
SPTLC1-204ENST00000469778 DAZ4Q86SG3 579 aaKnown RBP8.73□□□□□ -1.01
SPTLC1-204ENST00000469778 GATD1Q8NB37 220 aa8.73□□□□□ -1.01
SPTLC1-204ENST00000469778 DAZ3Q9NR90 486 aaKnown RBP8.73□□□□□ -1.01
SPTLC1-204ENST00000469778 A0A1B0GXF2 115 aa8.72□□□□□ -1.01
SPTLC1-204ENST00000469778 GAGE12JA6NER3 117 aa8.72□□□□□ -1.01
SPTLC1-204ENST00000469778 CAMPP49913 170 aa8.72□□□□□ -1.01
SPTLC1-204ENST00000469778 UBE2D3P61077 147 aa8.72□□□□□ -1.01
SPTLC1-204ENST00000469778 UBE2D2P62837 147 aa8.72□□□□□ -1.01
SPTLC1-204ENST00000469778 GAGE1Q13065 139 aa8.72□□□□□ -1.01
SPTLC1-204ENST00000469778 GAGE4Q13068 117 aa8.72□□□□□ -1.01
SPTLC1-204ENST00000469778 GAGE5Q13069 117 aa8.72□□□□□ -1.01
SPTLC1-204ENST00000469778 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
SPTLC1-204ENST00000469778 ZNRF2Q8NHG8 242 aa8.72□□□□□ -1.01
SPTLC1-204ENST00000469778 LINC00588Q9Y4M8 146 aa8.72□□□□□ -1.01
SPTLC1-204ENST00000469778 TRAV8-6A0A0B4J262 113 aa8.71□□□□□ -1.02
SPTLC1-204ENST00000469778 LOC100131303A0A0U1RQF7 123 aa8.71□□□□□ -1.02
SPTLC1-204ENST00000469778 PPBPP02775 128 aa8.71□□□□□ -1.02
SPTLC1-204ENST00000469778 RAB4AP20338 218 aa8.71□□□□□ -1.02
SPTLC1-204ENST00000469778 COX19Q49B96 90 aa8.71□□□□□ -1.02
SPTLC1-204ENST00000469778 FAM104BQ5XKR9 115 aa8.71□□□□□ -1.02
SPTLC1-204ENST00000469778 NEXN-AS1Q8NBZ9 246 aa8.71□□□□□ -1.02
SPTLC1-204ENST00000469778 RPS10P5Q9NQ39 176 aa8.71□□□□□ -1.02
SPTLC1-204ENST00000469778 BTF3P20290 206 aaKnown RBP8.7□□□□□ -1.02
SPTLC1-204ENST00000469778 LELP1Q5T871 98 aa8.7□□□□□ -1.02
SPTLC1-204ENST00000469778 SLC7A5P1Q8MH63 180 aa8.7□□□□□ -1.02
SPTLC1-204ENST00000469778 Q9H8V8 135 aa8.7□□□□□ -1.02
SPTLC1-204ENST00000469778 TRAV9-2A0A087WT02 112 aa8.69□□□□□ -1.02
SPTLC1-204ENST00000469778 TRBV6-5A0A0K0K1A5 114 aa8.69□□□□□ -1.02
SPTLC1-204ENST00000469778 PKIAP61925 76 aa8.69□□□□□ -1.02
SPTLC1-204ENST00000469778 MRPL54Q6P161 138 aaKnown RBP8.69□□□□□ -1.02
SPTLC1-204ENST00000469778 PLECQ15149 4684 aaKnown RBP8.69□□□□□ -1.02
SPTLC1-204ENST00000469778 TTC32Q5I0X7 151 aa8.68□□□□□ -1.02
SPTLC1-204ENST00000469778 AMN1Q8IY45 258 aa8.68□□□□□ -1.02
SPTLC1-204ENST00000469778 RNF185Q96GF1 192 aa8.68□□□□□ -1.02
SPTLC1-204ENST00000469778 Q9UF83 564 aa8.68□□□□□ -1.02
SPTLC1-204ENST00000469778 TRBV24-1A0A075B6N3 115 aa8.67□□□□□ -1.02
SPTLC1-204ENST00000469778 PHOX2AO14813 284 aa8.67□□□□□ -1.02
SPTLC1-204ENST00000469778 SIVA1O15304 175 aa8.67□□□□□ -1.02
SPTLC1-204ENST00000469778 C20orf78Q9BR46 151 aa8.67□□□□□ -1.02
SPTLC1-204ENST00000469778 ST20Q9HBF5 79 aa8.67□□□□□ -1.02
SPTLC1-204ENST00000469778 LAMTOR2Q9Y2Q5 125 aa8.67□□□□□ -1.02
SPTLC1-204ENST00000469778 TRBV6-8A0A0A6YYG3 113 aa8.66□□□□□ -1.02
SPTLC1-204ENST00000469778 NCR2O95944 276 aa8.66□□□□□ -1.02
SPTLC1-204ENST00000469778 DNAH10OSP0CZ25 163 aa8.66□□□□□ -1.02
SPTLC1-204ENST00000469778 CKS2P33552 79 aa8.66□□□□□ -1.02
SPTLC1-204ENST00000469778 OR10J3Q5JRS4 329 aa8.66□□□□□ -1.02
SPTLC1-204ENST00000469778 GNB1LQ9BYB4 327 aa8.66□□□□□ -1.02
SPTLC1-204ENST00000469778 IGHV3-38A0A0C4DH36 116 aa8.65□□□□□ -1.02
SPTLC1-204ENST00000469778 VCYO14598 125 aa8.65□□□□□ -1.02
SPTLC1-204ENST00000469778 TCAPO15273 167 aa8.65□□□□□ -1.02
SPTLC1-204ENST00000469778 MT-ND6P03923 174 aa8.65□□□□□ -1.02
SPTLC1-204ENST00000469778 RPL32P62910 135 aaKnown RBP8.65□□□□□ -1.02
SPTLC1-204ENST00000469778 MRPL51Q4U2R6 128 aaKnown RBP8.65□□□□□ -1.02
SPTLC1-204ENST00000469778 ORMDL3Q8N138 153 aa8.65□□□□□ -1.02
SPTLC1-204ENST00000469778 C10orf126Q8N4M7 172 aa8.65□□□□□ -1.02
SPTLC1-204ENST00000469778 CHCHD7Q9BUK0 85 aa8.65□□□□□ -1.02
SPTLC1-204ENST00000469778 LYSTQ99698 3801 aa8.64□□□□□ -1.03
SPTLC1-204ENST00000469778 TRAV26-2A0A0B4J265 109 aa8.64□□□□□ -1.03
SPTLC1-204ENST00000469778 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
SPTLC1-204ENST00000469778 NBDYA0A0U1RRE5 68 aa8.64□□□□□ -1.03
SPTLC1-204ENST00000469778 I3L3M4 83 aa8.64□□□□□ -1.03
SPTLC1-204ENST00000469778 HLA-DQA1P01909 254 aa8.64□□□□□ -1.03
SPTLC1-204ENST00000469778 COTL1Q14019 142 aa8.64□□□□□ -1.03
SPTLC1-204ENST00000469778 IQCJQ1A5X6 159 aa8.64□□□□□ -1.03
SPTLC1-204ENST00000469778 LINC01556Q5JQF7 62 aa8.64□□□□□ -1.03
SPTLC1-204ENST00000469778 SMCO4Q9NRQ5 59 aa8.64□□□□□ -1.03
SPTLC1-204ENST00000469778 ALMS1Q8TCU4 4167 aa8.63□□□□□ -1.03
SPTLC1-204ENST00000469778 TRBV25-1A0A075B6N4 114 aa8.63□□□□□ -1.03
SPTLC1-204ENST00000469778 IGHV1-24A0A0C4DH33 117 aa8.63□□□□□ -1.03
SPTLC1-204ENST00000469778 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
SPTLC1-204ENST00000469778 POLR2KP53803 58 aaKnown RBP8.63□□□□□ -1.03
SPTLC1-204ENST00000469778 SUMO2P61956 95 aaKnown RBP8.63□□□□□ -1.03
SPTLC1-204ENST00000469778 Q6ZR54 194 aa8.63□□□□□ -1.03
SPTLC1-204ENST00000469778 TMEM136Q6ZRR5 245 aa8.63□□□□□ -1.03
SPTLC1-204ENST00000469778 TMEM70Q9BUB7 260 aa8.63□□□□□ -1.03
SPTLC1-204ENST00000469778 URGCP-MRPS24S4R325 110 aa8.63□□□□□ -1.03
SPTLC1-204ENST00000469778 KMT2CQ8NEZ4 4911 aaKnown RBP8.63□□□□□ -1.03
SPTLC1-204ENST00000469778 H7C423 109 aa8.62□□□□□ -1.03
SPTLC1-204ENST00000469778 PMCHP20382 165 aa8.62□□□□□ -1.03
SPTLC1-204ENST00000469778 ELOBQ15370 118 aa8.62□□□□□ -1.03
SPTLC1-204ENST00000469778 NRACQ8N912 160 aa8.62□□□□□ -1.03
SPTLC1-204ENST00000469778 RPL39LQ96EH5 51 aaKnown RBP8.62□□□□□ -1.03
SPTLC1-204ENST00000469778 PRSS47A8MTI9 375 aa8.61□□□□□ -1.03
SPTLC1-204ENST00000469778 D6R8Y8 96 aa8.61□□□□□ -1.03
SPTLC1-204ENST00000469778 TNFRSF6BO95407 300 aa8.61□□□□□ -1.03
SPTLC1-204ENST00000469778 APCSP02743 223 aa8.61□□□□□ -1.03
SPTLC1-204ENST00000469778 RPS10P46783 165 aaKnown RBP8.61□□□□□ -1.03
SPTLC1-204ENST00000469778 WFDC10BQ8IUB3 73 aa8.61□□□□□ -1.03
SPTLC1-204ENST00000469778 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
SPTLC1-204ENST00000469778 DNAH1Q9P2D7 4330 aa8.6□□□□□ -1.03
SPTLC1-204ENST00000469778 A0A087WX48 190 aa8.6□□□□□ -1.03
SPTLC1-204ENST00000469778 SMAGPQ0VAQ4 97 aa8.6□□□□□ -1.03
SPTLC1-204ENST00000469778 NTM-AS1Q6ZSK4 140 aa8.6□□□□□ -1.03
SPTLC1-204ENST00000469778 NIT1Q86X76 327 aa8.6□□□□□ -1.03
SPTLC1-204ENST00000469778 PRELID3AQ96N28 172 aa8.6□□□□□ -1.03
SPTLC1-204ENST00000469778 CHCHD5Q9BSY4 110 aa8.6□□□□□ -1.03
SPTLC1-204ENST00000469778 TMEM243Q9BU79 118 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms