RNA–Protein interactions for RNA: ENST00000468937.2

SYNE1-218, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 2

Gene SYNE1, Length 688 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-218ENST00000468937 DEFB114Q30KQ6 69 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 SOHLH1Q5JUK2 328 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 LCN12Q6JVE5 192 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 FAM24BQ8N5W8 94 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 HIST1H2BAQ96A08 127 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 NARS2Q96I59 477 aaKnown RBP2.63□□□□□ -1.99
SYNE1-218ENST00000468937 IGF2BP2-AS1Q96M15 143 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 SMIM7Q9BQ49 75 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 OTORQ9NRC9 128 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 EPDR1Q9UM22 224 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 KLF12Q9Y4X4 402 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 DNAH6Q9C0G6 4158 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 PLECQ15149 4684 aaKnown RBP2.62□□□□□ -1.99
SYNE1-218ENST00000468937 IGKV2-40A0A087WW87 121 aaPredicted RBP2.62□□□□□ -1.99
SYNE1-218ENST00000468937 TRAV8-1A0A0A6YYK1 113 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 TRAV2A0A0B4J234 112 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 TRBV6-1A0A0K0K1D8 114 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 IZUMO1RA6ND01 250 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 ZNF727A8MUV8 499 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 ZNF705FA8MVS1 300 aaPredicted RBP2.62□□□□□ -1.99
SYNE1-218ENST00000468937 ISLRO14498 428 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 LTAP01374 205 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 IGKV2D-40P01614 121 aaPredicted RBP2.62□□□□□ -1.99
SYNE1-218ENST00000468937 IGLV1-51P01701 117 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 APOC3P02656 99 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 PRB4P10163 310 aaPredicted RBP2.62□□□□□ -1.99
SYNE1-218ENST00000468937 BMI1P35226 326 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 AKR1C3P42330 323 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 RPL35P42766 123 aaKnown RBP2.62□□□□□ -1.99
SYNE1-218ENST00000468937 CEBPGP53567 150 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 TAS2R60P59551 318 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 RPL23P62829 140 aaKnown RBP2.62□□□□□ -1.99
SYNE1-218ENST00000468937 PSG3Q16557 428 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 COX19Q49B96 90 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 PRR9Q5T870 116 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 Q86TA4 180 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 TMEM75Q8N9X5 138 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 MS4A6AQ9H2W1 248 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 NAT8Q9UHE5 227 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 PRELID1Q9Y255 219 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 LY96Q9Y6Y9 160 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 U3KQK5 164 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 HYDINQ4G0P3 5121 aa2.62□□□□□ -1.99
SYNE1-218ENST00000468937 IGKV3-7A0A075B6H7 116 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 TRAV25A0A0B4J276 109 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 SERTM2A0A1B0GWG4 89 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 RBAKDNA6NC62 111 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 A8MTW9 85 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 H0Y8G0 127 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 K7EN84 100 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 S100A9P06702 114 aaKnown RBP2.61□□□□□ -1.99
SYNE1-218ENST00000468937 TLX1NBP0CAT3 122 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 CSN1S1P47710 185 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 GNG4P50150 75 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 DEFB1P60022 68 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 FLI1Q01543 452 aaPredicted RBP2.61□□□□□ -1.99
SYNE1-218ENST00000468937 TMEM241Q24JQ0 296 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 CENPWQ5EE01 88 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 GDF5OSQ5U4N7 250 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 SAMD13Q5VXD3 122 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 GOLT1AQ6ZVE7 132 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 SVBPQ8N300 66 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 OR2K2Q8NGT1 345 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 Q8TAT8 98 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 MUC7Q8TAX7 377 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 CMTM2Q8TAZ6 248 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 DYNLRB2Q8TF09 96 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 ISOC2Q96AB3 205 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 TVP23CQ96ET8 276 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 SMIM12Q96EX1 92 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 FMC1Q96HJ9 113 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 XCL2Q9UBD3 114 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 PSG8Q9UQ74 426 aa2.61□□□□□ -1.99
SYNE1-218ENST00000468937 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 A0A087WWC5 75 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 A0A0J9YX75 114 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 LCE6AA0A183 80 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 C7orf77A4D0Y5 90 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 C19orf71A6NCJ1 209 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 ZNF705GA8MUZ8 300 aaPredicted RBP2.6□□□□□ -1.99
SYNE1-218ENST00000468937 B4DEV8 164 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 F6UB75 175 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 K7EQM0 130 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 DNASE2O00115 360 aaPredicted RBP2.6□□□□□ -1.99
SYNE1-218ENST00000468937 SCO1O75880 301 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 GCGP01275 180 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 IGKV4-1P06312 121 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 ZNF688P0C7X2 276 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 ZNF705DP0CH99 300 aaPredicted RBP2.6□□□□□ -1.99
SYNE1-218ENST00000468937 ZNF705BP0CI00 300 aaPredicted RBP2.6□□□□□ -1.99
SYNE1-218ENST00000468937 CRIP1P50238 77 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 INSL3P51460 131 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 DEFB131AP59861 70 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 UBE2G1P62253 170 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 PAFAH1B2P68402 229 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 ERCC8Q13216 396 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 OR5I1Q13606 314 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 RHEBQ15382 184 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 ADIRFQ15847 76 aa2.6□□□□□ -1.99
SYNE1-218ENST00000468937 DEFB121Q5J5C9 76 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms