RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 TPT1P13693 172 aaKnown RBP-2.28□□□□□ -2.77
SSB-208ENST00000468600 UBE2D3P61077 147 aa-2.28□□□□□ -2.77
SSB-208ENST00000468600 UBE2D2P62837 147 aa-2.28□□□□□ -2.77
SSB-208ENST00000468600 LIN52Q52LA3 116 aa-2.28□□□□□ -2.77
SSB-208ENST00000468600 UHRF1BP1Q6BDS2 1440 aa-2.28□□□□□ -2.77
SSB-208ENST00000468600 CAMSAP2Q08AD1 1489 aa-2.28□□□□□ -2.77
SSB-208ENST00000468600 ZFHX3Q15911 3703 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 CSMD1Q96PZ7 3565 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 SMIM23A6NLE4 172 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 AIPO00170 330 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 GNG5P63218 68 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 DEFB110Q30KQ9 67 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 PPDPFLQ8WWR9 84 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 AP3S1Q92572 193 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 USMG5Q96IX5 58 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 CARD19Q96LW7 228 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 OTORQ9NRC9 128 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 PRNDQ9UKY0 176 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 ARAP1Q96P48 1450 aa-2.29□□□□□ -2.78
SSB-208ENST00000468600 LRBAP50851 2863 aa-2.3□□□□□ -2.78
SSB-208ENST00000468600 CXorf51AA0A1B0GTR3 108 aa-2.3□□□□□ -2.78
SSB-208ENST00000468600 RTL8BQ17RB0 113 aa-2.3□□□□□ -2.78
SSB-208ENST00000468600 IFI27L1Q96BM0 104 aa-2.3□□□□□ -2.78
SSB-208ENST00000468600 RTL8AQ9BWD3 113 aa-2.3□□□□□ -2.78
SSB-208ENST00000468600 TRIOO75962 3097 aa-2.31□□□□□ -2.78
SSB-208ENST00000468600 TLN1Q9Y490 2541 aaKnown RBP-2.31□□□□□ -2.78
SSB-208ENST00000468600 SSSCA1O60232 199 aa-2.31□□□□□ -2.78
SSB-208ENST00000468600 ADCYAP1P18509 176 aa-2.31□□□□□ -2.78
SSB-208ENST00000468600 MAXP61244 160 aa-2.31□□□□□ -2.78
SSB-208ENST00000468600 TPM4P67936 248 aa-2.31□□□□□ -2.78
SSB-208ENST00000468600 Q6JHZ5 121 aa-2.31□□□□□ -2.78
SSB-208ENST00000468600 TMEM91Q6ZNR0 172 aa-2.31□□□□□ -2.78
SSB-208ENST00000468600 SNX29P2Q8IUI4 249 aa-2.31□□□□□ -2.78
SSB-208ENST00000468600 NUP35Q8NFH5 326 aa-2.31□□□□□ -2.78
SSB-208ENST00000468600 NEK7Q8TDX7 302 aa-2.31□□□□□ -2.78
SSB-208ENST00000468600 SMIM4Q8WVI0 70 aa-2.31□□□□□ -2.78
SSB-208ENST00000468600 PRAP1Q96NZ9 151 aa-2.31□□□□□ -2.78
SSB-208ENST00000468600 KDM5AP29375 1690 aaKnown RBP-2.31□□□□□ -2.78
SSB-208ENST00000468600 POLA1P09884 1462 aaPredicted RBP-2.32□□□□□ -2.78
SSB-208ENST00000468600 F8VRH5 84 aa-2.32□□□□□ -2.78
SSB-208ENST00000468600 H7C1C5 153 aa-2.32□□□□□ -2.78
SSB-208ENST00000468600 CETN3O15182 167 aa-2.32□□□□□ -2.78
SSB-208ENST00000468600 NPC2P61916 151 aa-2.32□□□□□ -2.78
SSB-208ENST00000468600 LCN6P62502 163 aa-2.32□□□□□ -2.78
SSB-208ENST00000468600 KRTAP19-5Q3LI72 72 aa-2.32□□□□□ -2.78
SSB-208ENST00000468600 NDUFA11Q86Y39 141 aa-2.32□□□□□ -2.78
SSB-208ENST00000468600 OR5H6Q8NGV6 325 aa-2.32□□□□□ -2.78
SSB-208ENST00000468600 VSTM2AQ8TAG5 236 aa-2.32□□□□□ -2.78
SSB-208ENST00000468600 C9orf16Q9BUW7 83 aa-2.32□□□□□ -2.78
SSB-208ENST00000468600 LRTM1Q9HBL6 345 aa-2.32□□□□□ -2.78
SSB-208ENST00000468600 S4R3F8 94 aa-2.32□□□□□ -2.78
SSB-208ENST00000468600 MAGI1Q96QZ7 1491 aaPredicted RBP-2.33□□□□□ -2.78
SSB-208ENST00000468600 KIF13AQ9H1H9 1805 aa-2.33□□□□□ -2.78
SSB-208ENST00000468600 IGHV1-24A0A0C4DH33 117 aa-2.33□□□□□ -2.78
SSB-208ENST00000468600 APOA2P02652 100 aa-2.33□□□□□ -2.78
SSB-208ENST00000468600 CST2P09228 141 aa-2.33□□□□□ -2.78
SSB-208ENST00000468600 SLC25A4P12235 298 aa-2.33□□□□□ -2.78
SSB-208ENST00000468600 S100A5P33763 92 aa-2.33□□□□□ -2.78
SSB-208ENST00000468600 SPCS2Q15005 226 aa-2.33□□□□□ -2.78
SSB-208ENST00000468600 TLN2Q9Y4G6 2542 aa-2.33□□□□□ -2.78
SSB-208ENST00000468600 PTPRGP23470 1445 aa-2.34□□□□□ -2.78
SSB-208ENST00000468600 IFT172Q9UG01 1749 aa-2.34□□□□□ -2.78
SSB-208ENST00000468600 ZNF142P52746 1687 aaPredicted RBP-2.34□□□□□ -2.78
SSB-208ENST00000468600 G3V2T6 193 aa-2.34□□□□□ -2.78
SSB-208ENST00000468600 H3BQV1 296 aa-2.34□□□□□ -2.78
SSB-208ENST00000468600 PITX3O75364 302 aa-2.34□□□□□ -2.78
SSB-208ENST00000468600 E2F6O75461 281 aa-2.34□□□□□ -2.78
SSB-208ENST00000468600 MT1BP07438 61 aa-2.34□□□□□ -2.78
SSB-208ENST00000468600 PRELID3AQ96N28 172 aa-2.34□□□□□ -2.78
SSB-208ENST00000468600 LAMTOR3Q9UHA4 124 aa-2.34□□□□□ -2.78
SSB-208ENST00000468600 ERG28Q9UKR5 140 aa-2.34□□□□□ -2.78
SSB-208ENST00000468600 PHIPQ8WWQ0 1821 aa-2.35□□□□□ -2.79
SSB-208ENST00000468600 SMG1Q96Q15 3661 aaKnown RBP-2.35□□□□□ -2.79
SSB-208ENST00000468600 SLC25A6P12236 298 aa-2.35□□□□□ -2.79
SSB-208ENST00000468600 PIPP12273 146 aaPredicted RBP-2.35□□□□□ -2.79
SSB-208ENST00000468600 MT1GP13640 62 aa-2.35□□□□□ -2.79
SSB-208ENST00000468600 CKS2P33552 79 aa-2.35□□□□□ -2.79
SSB-208ENST00000468600 CCL7P80098 99 aa-2.35□□□□□ -2.79
SSB-208ENST00000468600 RPL19P84098 196 aaKnown RBP-2.35□□□□□ -2.79
SSB-208ENST00000468600 MORN4Q8NDC4 146 aa-2.35□□□□□ -2.79
SSB-208ENST00000468600 PYCARDQ9ULZ3 195 aa-2.35□□□□□ -2.79
SSB-208ENST00000468600 TRAPPC8Q9Y2L5 1435 aa-2.35□□□□□ -2.79
SSB-208ENST00000468600 LRP5O75197 1615 aa-2.35□□□□□ -2.79
SSB-208ENST00000468600 IBTKQ9P2D0 1353 aaPredicted RBP-2.36□□□□□ -2.79
SSB-208ENST00000468600 TRANK1O15050 2925 aa-2.36□□□□□ -2.79
SSB-208ENST00000468600 TRAV16A0A0A6YYK6 109 aaPredicted RBP-2.36□□□□□ -2.79
SSB-208ENST00000468600 TRBV7-4A0A0J9YYF1 115 aa-2.36□□□□□ -2.79
SSB-208ENST00000468600 ARPC5O15511 151 aa-2.36□□□□□ -2.79
SSB-208ENST00000468600 FABP2P12104 132 aa-2.36□□□□□ -2.79
SSB-208ENST00000468600 CEBPGP53567 150 aa-2.36□□□□□ -2.79
SSB-208ENST00000468600 BLCAPP62952 87 aa-2.36□□□□□ -2.79
SSB-208ENST00000468600 TMEM170BQ5T4T1 132 aa-2.36□□□□□ -2.79
SSB-208ENST00000468600 AKAP14Q86UN6 197 aa-2.36□□□□□ -2.79
SSB-208ENST00000468600 SH3BGRL3Q9H299 93 aa-2.36□□□□□ -2.79
SSB-208ENST00000468600 ARMC1Q9NVT9 282 aa-2.36□□□□□ -2.79
SSB-208ENST00000468600 SSR3Q9UNL2 185 aa-2.36□□□□□ -2.79
SSB-208ENST00000468600 HMGXB3Q12766 1538 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 DLC1Q96QB1 1528 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 FER1L6Q2WGJ9 1857 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 SPTAN1Q13813 2472 aaKnown RBP-2.37□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms