RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 SPATA45Q537H7 98 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 GNB1LQ9BYB4 327 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 IGKV3-20P01619 116 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 CTRLP40313 264 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 TTC32Q5I0X7 151 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 LYZL1Q6UWQ5 148 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 GATD1Q8NB37 220 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 CNFNQ9BYD5 112 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 JMJD1CQ15652 2540 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 PKD1L1Q8TDX9 2849 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 TRAV12-2A0A075B6T6 113 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 GRIFINA4D1Z8 144 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 CD7P09564 240 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 RPL13AP40429 203 aaKnown RBP6.06□□□□□ -1.44
BRCA1-208ENST00000468300 TEX43Q6ZNM6 134 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 ZNF747Q9BV97 191 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 CDIP1Q9H305 208 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 MRPS16Q9Y3D3 137 aaKnown RBP6.06□□□□□ -1.44
BRCA1-208ENST00000468300 MT-ATP8P03928 68 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 TSPOP30536 169 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 ATP5L2Q7Z4Y8 100 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 WFDC9Q8NEX5 89 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 C2orf48Q96LS8 159 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 WFDC10AQ9H1F0 79 aa6.06□□□□□ -1.44
BRCA1-208ENST00000468300 GPX1P07203 203 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 GIG44P09565 113 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-208ENST00000468300 NHLRC4P0CG21 123 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-208ENST00000468300 SPINK13Q1W4C9 94 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 EBLN2Q6P2I7 272 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 TRAPPC1Q9Y5R8 145 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 MUC21A0A140T8X8 626 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 SRIP30626 198 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 LEPP41159 167 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 MUC21Q5SSG8 566 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 C11orf45Q8TAV5 145 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 MRPL18Q9H0U6 180 aaKnown RBP6.05□□□□□ -1.44
BRCA1-208ENST00000468300 MSRB1Q9NZV6 116 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 TP53TG3Q9ULZ0 132 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 TRAV21A0A0B4J279 112 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 SNURFLB1AK76 121 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 GNRH2O43555 120 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 DUSP14O95147 198 aaKnown RBP6.05□□□□□ -1.44
BRCA1-208ENST00000468300 RNASE3P12724 160 aaKnown RBP6.05□□□□□ -1.44
BRCA1-208ENST00000468300 FXYD7P58549 80 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 TRPT1Q86TN4 253 aaKnown RBP6.05□□□□□ -1.44
BRCA1-208ENST00000468300 ZNRF2Q8NHG8 242 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 SCRT2Q9NQ03 307 aa6.05□□□□□ -1.44
BRCA1-208ENST00000468300 MUC4Q99102 2169 aa6.04□□□□□ -1.44
BRCA1-208ENST00000468300 TRAV12-3A0A0B4J271 114 aa6.04□□□□□ -1.44
BRCA1-208ENST00000468300 CRYGDP07320 174 aa6.04□□□□□ -1.44
BRCA1-208ENST00000468300 IGLC3P0DOY3 106 aa6.04□□□□□ -1.44
BRCA1-208ENST00000468300 LINC00310P59036 64 aa6.04□□□□□ -1.44
BRCA1-208ENST00000468300 HBBP68871 147 aa6.04□□□□□ -1.44
BRCA1-208ENST00000468300 ZNF493Q6ZR52 646 aa6.04□□□□□ -1.44
BRCA1-208ENST00000468300 TP53TG1Q9Y2A0 90 aa6.04□□□□□ -1.44
BRCA1-208ENST00000468300 IGHV4-4A0A075B6R2 117 aa6.03□□□□□ -1.44
BRCA1-208ENST00000468300 A0A1B0GUT8 65 aa6.03□□□□□ -1.44
BRCA1-208ENST00000468300 CARD19Q96LW7 228 aa6.03□□□□□ -1.44
BRCA1-208ENST00000468300 PRM2P04554 102 aa6.03□□□□□ -1.44
BRCA1-208ENST00000468300 OR5AL1P0C617 328 aa6.03□□□□□ -1.44
BRCA1-208ENST00000468300 OR10AG1Q8NH19 301 aa6.03□□□□□ -1.44
BRCA1-208ENST00000468300 USP17L23D6RBM5 183 aa6.02□□□□□ -1.45
BRCA1-208ENST00000468300 F2Z2F3 143 aa6.02□□□□□ -1.45
BRCA1-208ENST00000468300 HLA-DQA1P01909 254 aa6.02□□□□□ -1.45
BRCA1-208ENST00000468300 NDUFV3P56181 108 aaKnown RBP6.02□□□□□ -1.45
BRCA1-208ENST00000468300 UFSP1Q6NVU6 142 aa6.02□□□□□ -1.45
BRCA1-208ENST00000468300 SPANXB1Q9NS25 103 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-208ENST00000468300 NUPR1O60356 82 aa6.02□□□□□ -1.45
BRCA1-208ENST00000468300 MT-ND6P03923 174 aa6.02□□□□□ -1.45
BRCA1-208ENST00000468300 COA6Q5JTJ3 125 aaKnown RBP6.02□□□□□ -1.45
BRCA1-208ENST00000468300 DEFB125Q8N687 156 aa6.02□□□□□ -1.45
BRCA1-208ENST00000468300 SYT8Q8NBV8 401 aa6.02□□□□□ -1.45
BRCA1-208ENST00000468300 OR5A1Q8NGJ0 315 aa6.02□□□□□ -1.45
BRCA1-208ENST00000468300 RNF185Q96GF1 192 aa6.02□□□□□ -1.45
BRCA1-208ENST00000468300 TM2D2Q9BX73 214 aa6.02□□□□□ -1.45
BRCA1-208ENST00000468300 IGLL1P15814 213 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 INSL3P51460 131 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 Q8N1Y9 231 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 STAB1Q9NY15 2570 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 IGHV3-16A0A0C4DH30 117 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 H3BVH4 76 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 K7EP34 96 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 NXPH4O95158 308 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 APCSP02743 223 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 MPV17L2Q567V2 206 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 C9orf66Q5T8R8 295 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 CSNK1G2-AS1Q8NCQ2 148 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 C9orf85Q96MD7 179 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 JPT2Q9H910 190 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 MDFICQ9P1T7 246 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 FAM236AA0A1B0GUQ0 79 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 FAM236BA0A1B0GV22 79 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 MED14OSP0DP75 135 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 CD164Q04900 197 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 C1orf158Q8N1D5 194 aa6.01□□□□□ -1.45
BRCA1-208ENST00000468300 A0A1B0GX51 115 aa6□□□□□ -1.45
BRCA1-208ENST00000468300 GAS8-AS1O95177 125 aa6□□□□□ -1.45
BRCA1-208ENST00000468300 RIGQ13278 110 aa6□□□□□ -1.45
BRCA1-208ENST00000468300 Q6ZUT4 128 aa6□□□□□ -1.45
BRCA1-208ENST00000468300 U3KQK5 164 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms