RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 CCDC171Q6TFL3 1326 aa-1.51□□□□□ -2.65
RBM39-226ENST00000468086 GOLGA3Q08378 1498 aa-1.51□□□□□ -2.65
RBM39-226ENST00000468086 SPTA1P02549 2419 aa-1.51□□□□□ -2.65
RBM39-226ENST00000468086 PKHD1L1Q86WI1 4243 aa-1.51□□□□□ -2.65
RBM39-226ENST00000468086 USF3Q68DE3 2245 aa-1.52□□□□□ -2.65
RBM39-226ENST00000468086 E7EQ34 232 aa-1.52□□□□□ -2.65
RBM39-226ENST00000468086 CCDC179H3BU77 68 aa-1.52□□□□□ -2.65
RBM39-226ENST00000468086 POLR2HP52434 150 aaKnown RBP-1.52□□□□□ -2.65
RBM39-226ENST00000468086 THEM6Q8WUY1 208 aa-1.52□□□□□ -2.65
RBM39-226ENST00000468086 SPRR2FQ96RM1 72 aa-1.52□□□□□ -2.65
RBM39-226ENST00000468086 WFDC6Q9BQY6 131 aa-1.52□□□□□ -2.65
RBM39-226ENST00000468086 ROCK1Q13464 1354 aa-1.52□□□□□ -2.65
RBM39-226ENST00000468086 DNAH3Q8TD57 4116 aa-1.52□□□□□ -2.65
RBM39-226ENST00000468086 BCL9LQ86UU0 1499 aa-1.52□□□□□ -2.65
RBM39-226ENST00000468086 PCNX1Q96RV3 2341 aa-1.52□□□□□ -2.65
RBM39-226ENST00000468086 A0A1W2PRE2 83 aa-1.53□□□□□ -2.65
RBM39-226ENST00000468086 M0R2T5 61 aa-1.53□□□□□ -2.65
RBM39-226ENST00000468086 NPFFO15130 113 aa-1.53□□□□□ -2.65
RBM39-226ENST00000468086 ZNF142P52746 1687 aaPredicted RBP-1.53□□□□□ -2.65
RBM39-226ENST00000468086 EDDM3BP56851 147 aa-1.53□□□□□ -2.65
RBM39-226ENST00000468086 Q5VV11 94 aa-1.53□□□□□ -2.65
RBM39-226ENST00000468086 HOPXQ9BPY8 73 aaPredicted RBP-1.53□□□□□ -2.65
RBM39-226ENST00000468086 SLC35B3Q9H1N7 401 aa-1.53□□□□□ -2.65
RBM39-226ENST00000468086 PLXNA1Q9UIW2 1896 aa-1.54□□□□□ -2.66
RBM39-226ENST00000468086 C10orf71Q711Q0 1435 aa-1.54□□□□□ -2.66
RBM39-226ENST00000468086 TRAV1-2A0A0B4J238 106 aa-1.54□□□□□ -2.66
RBM39-226ENST00000468086 TRAV12-3A0A0B4J271 114 aa-1.54□□□□□ -2.66
RBM39-226ENST00000468086 SNX29P2Q8IUI4 249 aa-1.54□□□□□ -2.66
RBM39-226ENST00000468086 ATP6V0E2Q8NHE4 81 aa-1.54□□□□□ -2.66
RBM39-226ENST00000468086 NOP16Q9Y3C1 178 aaKnown RBP-1.54□□□□□ -2.66
RBM39-226ENST00000468086 COL6A5A8TX70 2615 aa-1.54□□□□□ -2.66
RBM39-226ENST00000468086 MED23Q9ULK4 1368 aa-1.55□□□□□ -2.66
RBM39-226ENST00000468086 MYH1P12882 1939 aa-1.55□□□□□ -2.66
RBM39-226ENST00000468086 AKAP11Q9UKA4 1901 aa-1.55□□□□□ -2.66
RBM39-226ENST00000468086 BCE1O60756 84 aa-1.55□□□□□ -2.66
RBM39-226ENST00000468086 DCDP81605 110 aaKnown RBP-1.55□□□□□ -2.66
RBM39-226ENST00000468086 ZMYM4Q5VZL5 1548 aa-1.56□□□□□ -2.66
RBM39-226ENST00000468086 GVINP1Q7Z2Y8 2422 aa-1.56□□□□□ -2.66
RBM39-226ENST00000468086 ARHGAP31Q2M1Z3 1444 aa-1.56□□□□□ -2.66
RBM39-226ENST00000468086 SPAG11AQ6PDA7 123 aa-1.56□□□□□ -2.66
RBM39-226ENST00000468086 TMEM91Q6ZNR0 172 aa-1.56□□□□□ -2.66
RBM39-226ENST00000468086 SCN3BQ9NY72 215 aa-1.56□□□□□ -2.66
RBM39-226ENST00000468086 ATPIF1Q9UII2 106 aa-1.56□□□□□ -2.66
RBM39-226ENST00000468086 DNAJC15Q9Y5T4 150 aa-1.56□□□□□ -2.66
RBM39-226ENST00000468086 ARAP1Q96P48 1450 aa-1.56□□□□□ -2.66
RBM39-226ENST00000468086 AKAP13Q12802 2813 aa-1.57□□□□□ -2.66
RBM39-226ENST00000468086 NBEAL2Q6ZNJ1 2754 aa-1.57□□□□□ -2.66
RBM39-226ENST00000468086 BORCS7-ASMTA0A0B4J1R7 106 aa-1.57□□□□□ -2.66
RBM39-226ENST00000468086 RPL7P18124 248 aaKnown RBP-1.57□□□□□ -2.66
RBM39-226ENST00000468086 S100A3P33764 101 aa-1.57□□□□□ -2.66
RBM39-226ENST00000468086 TRIQKQ629K1 86 aa-1.57□□□□□ -2.66
RBM39-226ENST00000468086 ATP11AUNQ6ZP68 121 aa-1.57□□□□□ -2.66
RBM39-226ENST00000468086 IQSEC2Q5JU85 1478 aa-1.57□□□□□ -2.66
RBM39-226ENST00000468086 MYO7BQ6PIF6 2116 aa-1.58□□□□□ -2.66
RBM39-226ENST00000468086 DNAH2Q9P225 4427 aa-1.58□□□□□ -2.66
RBM39-226ENST00000468086 PLECQ15149 4684 aaKnown RBP-1.58□□□□□ -2.66
RBM39-226ENST00000468086 FXYD6-FXYD2A0A087WZ82 144 aa-1.58□□□□□ -2.66
RBM39-226ENST00000468086 CCDC115Q96NT0 180 aa-1.58□□□□□ -2.66
RBM39-226ENST00000468086 TP53AIP1Q9HCN2 124 aa-1.58□□□□□ -2.66
RBM39-226ENST00000468086 NPVFQ9HCQ7 196 aa-1.58□□□□□ -2.66
RBM39-226ENST00000468086 MYH3P11055 1940 aa-1.58□□□□□ -2.66
RBM39-226ENST00000468086 IBTKQ9P2D0 1353 aaPredicted RBP-1.59□□□□□ -2.66
RBM39-226ENST00000468086 TACC2O95359 2948 aa-1.59□□□□□ -2.66
RBM39-226ENST00000468086 KIAA0100Q14667 2235 aaKnown RBP-1.59□□□□□ -2.66
RBM39-226ENST00000468086 RBP4P02753 201 aa-1.59□□□□□ -2.66
RBM39-226ENST00000468086 SMIM6P0DI80 62 aa-1.59□□□□□ -2.66
RBM39-226ENST00000468086 HAMPP81172 84 aa-1.59□□□□□ -2.66
RBM39-226ENST00000468086 OR9Q1Q8NGQ5 310 aa-1.59□□□□□ -2.66
RBM39-226ENST00000468086 GID8Q9NWU2 228 aa-1.59□□□□□ -2.66
RBM39-226ENST00000468086 UHRF1BP1LA0JNW5 1464 aa-1.59□□□□□ -2.66
RBM39-226ENST00000468086 PTPRMP28827 1452 aa-1.59□□□□□ -2.66
RBM39-226ENST00000468086 FER1L6Q2WGJ9 1857 aa-1.59□□□□□ -2.66
RBM39-226ENST00000468086 TMEM238C9JI98 176 aa-1.6□□□□□ -2.67
RBM39-226ENST00000468086 YPEL1O60688 119 aa-1.6□□□□□ -2.67
RBM39-226ENST00000468086 SMIM24O75264 130 aa-1.6□□□□□ -2.67
RBM39-226ENST00000468086 CALML5Q9NZT1 146 aa-1.6□□□□□ -2.67
RBM39-226ENST00000468086 CASZ1Q86V15 1759 aa-1.6□□□□□ -2.67
RBM39-226ENST00000468086 PRKDCP78527 4128 aaKnown RBP-1.6□□□□□ -2.67
RBM39-226ENST00000468086 KIF13AQ9H1H9 1805 aa-1.61□□□□□ -2.67
RBM39-226ENST00000468086 URB1O60287 2271 aaKnown RBP-1.61□□□□□ -2.67
RBM39-226ENST00000468086 FAM92AA1XBS5 289 aa-1.61□□□□□ -2.67
RBM39-226ENST00000468086 J3QLW9 94 aa-1.61□□□□□ -2.67
RBM39-226ENST00000468086 HLA-DRB4P13762 266 aa-1.61□□□□□ -2.67
RBM39-226ENST00000468086 CFAP126Q5VTH2 177 aa-1.61□□□□□ -2.67
RBM39-226ENST00000468086 BAGE3Q86Y29 109 aa-1.61□□□□□ -2.67
RBM39-226ENST00000468086 HLA-DRB4X5D2U9 266 aa-1.61□□□□□ -2.67
RBM39-226ENST00000468086 ZNF609O15014 1411 aa-1.61□□□□□ -2.67
RBM39-226ENST00000468086 PLXNA2O75051 1894 aa-1.61□□□□□ -2.67
RBM39-226ENST00000468086 J3KT08 172 aa-1.62□□□□□ -2.67
RBM39-226ENST00000468086 LAMA3Q16787 3333 aa-1.62□□□□□ -2.67
RBM39-226ENST00000468086 BICRAQ9NZM4 1560 aa-1.63□□□□□ -2.67
RBM39-226ENST00000468086 PHIPQ8WWQ0 1821 aa-1.63□□□□□ -2.67
RBM39-226ENST00000468086 LAMA1P25391 3075 aa-1.63□□□□□ -2.67
RBM39-226ENST00000468086 PAEPP09466 180 aa-1.63□□□□□ -2.67
RBM39-226ENST00000468086 SPRR1BP22528 89 aa-1.63□□□□□ -2.67
RBM39-226ENST00000468086 TRBV6-1A0A0K0K1D8 114 aa-1.64□□□□□ -2.67
RBM39-226ENST00000468086 DPM2O94777 84 aa-1.64□□□□□ -2.67
RBM39-226ENST00000468086 MT1AP04731 61 aa-1.64□□□□□ -2.67
RBM39-226ENST00000468086 DEFA5Q01523 94 aa-1.64□□□□□ -2.67
RBM39-226ENST00000468086 PIGYQ3MUY2 71 aa-1.64□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms