RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 GAGE12JA6NER3 117 aa11.86□□□□□ -0.51
VARS2-204ENST00000467717 GAGE1Q13065 139 aa11.86□□□□□ -0.51
VARS2-204ENST00000467717 GAGE4Q13068 117 aa11.86□□□□□ -0.51
VARS2-204ENST00000467717 GAGE5Q13069 117 aa11.86□□□□□ -0.51
VARS2-204ENST00000467717 GAGE13Q4V321 117 aa11.86□□□□□ -0.51
VARS2-204ENST00000467717 SH2D6Q7Z4S9 175 aa11.86□□□□□ -0.51
VARS2-204ENST00000467717 RNF185Q96GF1 192 aa11.86□□□□□ -0.51
VARS2-204ENST00000467717 Q9UF83 564 aa11.86□□□□□ -0.51
VARS2-204ENST00000467717 TRAV26-2A0A0B4J265 109 aa11.85□□□□□ -0.51
VARS2-204ENST00000467717 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
VARS2-204ENST00000467717 NEGR1Q7Z3B1 354 aa11.85□□□□□ -0.51
VARS2-204ENST00000467717 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
VARS2-204ENST00000467717 SMCO4Q9NRQ5 59 aa11.85□□□□□ -0.51
VARS2-204ENST00000467717 TRBV7-3A0A075B6L6 115 aa11.84□□□□□ -0.51
VARS2-204ENST00000467717 LINC00694P0DN24 101 aa11.84□□□□□ -0.51
VARS2-204ENST00000467717 ELOBQ15370 118 aa11.84□□□□□ -0.51
VARS2-204ENST00000467717 NEXN-AS1Q8NBZ9 246 aa11.84□□□□□ -0.51
VARS2-204ENST00000467717 ZNRF2Q8NHG8 242 aa11.84□□□□□ -0.51
VARS2-204ENST00000467717 MRAP2Q96G30 205 aa11.84□□□□□ -0.51
VARS2-204ENST00000467717 DNAJC30Q96LL9 226 aa11.84□□□□□ -0.51
VARS2-204ENST00000467717 NIT2Q9NQR4 276 aa11.83□□□□□ -0.52
VARS2-204ENST00000467717 TRBV24-1A0A075B6N3 115 aa11.82□□□□□ -0.52
VARS2-204ENST00000467717 CCL18P55774 89 aa11.82□□□□□ -0.52
VARS2-204ENST00000467717 COX19Q49B96 90 aa11.82□□□□□ -0.52
VARS2-204ENST00000467717 MRPL51Q4U2R6 128 aaKnown RBP11.82□□□□□ -0.52
VARS2-204ENST00000467717 ATP6V0E2Q8NHE4 81 aa11.82□□□□□ -0.52
VARS2-204ENST00000467717 TNFRSF18Q9Y5U5 241 aa11.82□□□□□ -0.52
VARS2-204ENST00000467717 TGIF2-C20orf24A0A0A6YYL0 155 aa11.81□□□□□ -0.52
VARS2-204ENST00000467717 ATP6V1G1O75348 118 aa11.81□□□□□ -0.52
VARS2-204ENST00000467717 S100A1P23297 94 aa11.81□□□□□ -0.52
VARS2-204ENST00000467717 UBE2D3P61077 147 aa11.81□□□□□ -0.52
VARS2-204ENST00000467717 UBE2D2P62837 147 aa11.81□□□□□ -0.52
VARS2-204ENST00000467717 TMEM136Q6ZRR5 245 aa11.81□□□□□ -0.52
VARS2-204ENST00000467717 CBLN2Q8IUK8 224 aa11.81□□□□□ -0.52
VARS2-204ENST00000467717 CKS2P33552 79 aa11.8□□□□□ -0.52
VARS2-204ENST00000467717 ESRGQ1W209 222 aa11.8□□□□□ -0.52
VARS2-204ENST00000467717 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
VARS2-204ENST00000467717 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.8□□□□□ -0.52
VARS2-204ENST00000467717 RPL39LQ96EH5 51 aaKnown RBP11.8□□□□□ -0.52
VARS2-204ENST00000467717 YPEL4Q96NS1 127 aa11.8□□□□□ -0.52
VARS2-204ENST00000467717 GNB1LQ9BYB4 327 aa11.8□□□□□ -0.52
VARS2-204ENST00000467717 SMKR1H3BMG3 65 aa11.79□□□□□ -0.52
VARS2-204ENST00000467717 GAS8-AS1O95177 125 aa11.79□□□□□ -0.52
VARS2-204ENST00000467717 NCR2O95944 276 aa11.79□□□□□ -0.52
VARS2-204ENST00000467717 PPP1R17O96001 155 aa11.79□□□□□ -0.52
VARS2-204ENST00000467717 HLA-DQA1P01909 254 aa11.79□□□□□ -0.52
VARS2-204ENST00000467717 PPBPP02775 128 aa11.79□□□□□ -0.52
VARS2-204ENST00000467717 TIRAPP58753 221 aa11.79□□□□□ -0.52
VARS2-204ENST00000467717 OR10J3Q5JRS4 329 aa11.79□□□□□ -0.52
VARS2-204ENST00000467717 LGALS9CQ6DKI2 356 aa11.79□□□□□ -0.52
VARS2-204ENST00000467717 DAZ4Q86SG3 579 aaKnown RBP11.79□□□□□ -0.52
VARS2-204ENST00000467717 GTSF1LQ9H1H1 148 aa11.79□□□□□ -0.52
VARS2-204ENST00000467717 DAZ3Q9NR90 486 aaKnown RBP11.79□□□□□ -0.52
VARS2-204ENST00000467717 TRBV6-5A0A0K0K1A5 114 aa11.78□□□□□ -0.52
VARS2-204ENST00000467717 D6R8Y8 96 aa11.78□□□□□ -0.52
VARS2-204ENST00000467717 RPS10P46783 165 aaKnown RBP11.78□□□□□ -0.52
VARS2-204ENST00000467717 UBE2DNLQ8IWF7 75 aa11.78□□□□□ -0.52
VARS2-204ENST00000467717 LINC00588Q9Y4M8 146 aa11.78□□□□□ -0.52
VARS2-204ENST00000467717 MT-ND6P03923 174 aa11.77□□□□□ -0.53
VARS2-204ENST00000467717 ORMDL3Q8N138 153 aa11.77□□□□□ -0.53
VARS2-204ENST00000467717 NRACQ8N912 160 aa11.77□□□□□ -0.53
VARS2-204ENST00000467717 LINC00476Q8WZB0 136 aa11.77□□□□□ -0.53
VARS2-204ENST00000467717 APCSP02743 223 aa11.76□□□□□ -0.53
VARS2-204ENST00000467717 ST20Q9HBF5 79 aa11.76□□□□□ -0.53
VARS2-204ENST00000467717 IGHV3-38A0A0C4DH36 116 aa11.75□□□□□ -0.53
VARS2-204ENST00000467717 SDHAF1A6NFY7 115 aa11.75□□□□□ -0.53
VARS2-204ENST00000467717 MRPS16Q9Y3D3 137 aaKnown RBP11.75□□□□□ -0.53
VARS2-204ENST00000467717 KMT2AQ03164 3969 aa11.75□□□□□ -0.53
VARS2-204ENST00000467717 DNAH6Q9C0G6 4158 aa11.74□□□□□ -0.53
VARS2-204ENST00000467717 LCE6AA0A183 80 aa11.74□□□□□ -0.53
VARS2-204ENST00000467717 PHOX2AO14813 284 aa11.74□□□□□ -0.53
VARS2-204ENST00000467717 TNFRSF6BO95407 300 aa11.74□□□□□ -0.53
VARS2-204ENST00000467717 LY6G6CO95867 125 aa11.74□□□□□ -0.53
VARS2-204ENST00000467717 TMEM97Q5BJF2 176 aa11.74□□□□□ -0.53
VARS2-204ENST00000467717 LELP1Q5T871 98 aa11.74□□□□□ -0.53
VARS2-204ENST00000467717 PRELID3AQ96N28 172 aa11.74□□□□□ -0.53
VARS2-204ENST00000467717 C20orf78Q9BR46 151 aa11.74□□□□□ -0.53
VARS2-204ENST00000467717 UPK3BQ9BT76 320 aa11.74□□□□□ -0.53
VARS2-204ENST00000467717 LAMTOR2Q9Y2Q5 125 aa11.74□□□□□ -0.53
VARS2-204ENST00000467717 SCO1O75880 301 aa11.73□□□□□ -0.53
VARS2-204ENST00000467717 SUMO2P61956 95 aaKnown RBP11.73□□□□□ -0.53
VARS2-204ENST00000467717 TMEM70Q9BUB7 260 aa11.73□□□□□ -0.53
VARS2-204ENST00000467717 MRPL18Q9H0U6 180 aaKnown RBP11.73□□□□□ -0.53
VARS2-204ENST00000467717 TRAPPC1Q9Y5R8 145 aa11.73□□□□□ -0.53
VARS2-204ENST00000467717 HYDINQ4G0P3 5121 aa11.72□□□□□ -0.53
VARS2-204ENST00000467717 NPYP01303 97 aa11.72□□□□□ -0.53
VARS2-204ENST00000467717 POLR2KP53803 58 aaKnown RBP11.72□□□□□ -0.53
VARS2-204ENST00000467717 FABP9Q0Z7S8 132 aa11.72□□□□□ -0.53
VARS2-204ENST00000467717 TRBV6-8A0A0A6YYG3 113 aa11.71□□□□□ -0.53
VARS2-204ENST00000467717 TRAV8-6A0A0B4J262 113 aa11.71□□□□□ -0.53
VARS2-204ENST00000467717 I3L3M4 83 aa11.71□□□□□ -0.53
VARS2-204ENST00000467717 VCYO14598 125 aa11.71□□□□□ -0.53
VARS2-204ENST00000467717 COTL1Q14019 142 aa11.71□□□□□ -0.53
VARS2-204ENST00000467717 KIAA1644Q3SXP7 199 aa11.71□□□□□ -0.53
VARS2-204ENST00000467717 TRBV27A0A0K0K1C4 114 aa11.7□□□□□ -0.54
VARS2-204ENST00000467717 COLCA2A8K830 154 aa11.7□□□□□ -0.54
VARS2-204ENST00000467717 PMCHP20382 165 aa11.7□□□□□ -0.54
VARS2-204ENST00000467717 RPL32P62910 135 aaKnown RBP11.7□□□□□ -0.54
VARS2-204ENST00000467717 NTM-AS1Q6ZSK4 140 aa11.69□□□□□ -0.54
VARS2-204ENST00000467717 Q9H8V8 135 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms