RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SPART-AS1P0CW21 52 aa10.43□□□□□ -0.74
BRAT1-203ENST00000467558 PCP4P48539 62 aa10.43□□□□□ -0.74
BRAT1-203ENST00000467558 TDRG1Q3Y452 100 aa10.43□□□□□ -0.74
BRAT1-203ENST00000467558 OVOL2Q9BRP0 275 aa10.43□□□□□ -0.74
BRAT1-203ENST00000467558 A0A0J9YY99 117 aa10.42□□□□□ -0.74
BRAT1-203ENST00000467558 CEND1Q8N111 149 aa10.42□□□□□ -0.74
BRAT1-203ENST00000467558 TRBV20-1A0A075B6N2 111 aa10.42□□□□□ -0.74
BRAT1-203ENST00000467558 SPINK8P0C7L1 97 aa10.42□□□□□ -0.74
BRAT1-203ENST00000467558 DEFB114Q30KQ6 69 aa10.42□□□□□ -0.74
BRAT1-203ENST00000467558 C2orf82Q6UX34 121 aa10.42□□□□□ -0.74
BRAT1-203ENST00000467558 TRBV7-3A0A075B6L6 115 aa10.42□□□□□ -0.74
BRAT1-203ENST00000467558 TEX48A0A1B0GUV7 120 aa10.42□□□□□ -0.74
BRAT1-203ENST00000467558 ATP5G1P05496 136 aa10.42□□□□□ -0.74
BRAT1-203ENST00000467558 ZNF124Q15973 351 aa10.42□□□□□ -0.74
BRAT1-203ENST00000467558 ANKRD39Q53RE8 183 aa10.42□□□□□ -0.74
BRAT1-203ENST00000467558 GDF5OSQ5U4N7 250 aa10.42□□□□□ -0.74
BRAT1-203ENST00000467558 HIST2H2BCQ6DN03 193 aa10.41□□□□□ -0.74
BRAT1-203ENST00000467558 C10orf99Q6UWK7 81 aa10.41□□□□□ -0.74
BRAT1-203ENST00000467558 MTURNQ8N3F0 131 aa10.41□□□□□ -0.74
BRAT1-203ENST00000467558 EPG5Q9HCE0 2579 aa10.41□□□□□ -0.74
BRAT1-203ENST00000467558 H3BMM0 161 aa10.41□□□□□ -0.74
BRAT1-203ENST00000467558 ATP6V0E2Q8NHE4 81 aa10.41□□□□□ -0.74
BRAT1-203ENST00000467558 TIMM17AQ99595 171 aa10.41□□□□□ -0.74
BRAT1-203ENST00000467558 SPEGQ15772 3267 aa10.41□□□□□ -0.74
BRAT1-203ENST00000467558 TRAV12-1A0A0B4J245 112 aa10.41□□□□□ -0.74
BRAT1-203ENST00000467558 BOD1L2Q8IYS8 172 aa10.41□□□□□ -0.74
BRAT1-203ENST00000467558 YPEL4Q96NS1 127 aa10.41□□□□□ -0.74
BRAT1-203ENST00000467558 PRO1854Q9UHT4 67 aa10.41□□□□□ -0.74
BRAT1-203ENST00000467558 GYPEP15421 78 aa10.4□□□□□ -0.74
BRAT1-203ENST00000467558 C10orf126Q8N4M7 172 aa10.4□□□□□ -0.74
BRAT1-203ENST00000467558 TMEM263Q8WUH6 116 aaKnown RBP10.4□□□□□ -0.74
BRAT1-203ENST00000467558 C20orf173Q96LM9 149 aa10.4□□□□□ -0.74
BRAT1-203ENST00000467558 MGAQ8IWI9 3026 aa10.4□□□□□ -0.74
BRAT1-203ENST00000467558 A0A0J9YXV3 536 aa10.4□□□□□ -0.74
BRAT1-203ENST00000467558 CRIP1P50238 77 aa10.4□□□□□ -0.74
BRAT1-203ENST00000467558 TOMM6Q96B49 74 aa10.4□□□□□ -0.74
BRAT1-203ENST00000467558 COL6A3P12111 3177 aa10.4□□□□□ -0.74
BRAT1-203ENST00000467558 IGLV1-40P01703 118 aa10.4□□□□□ -0.75
BRAT1-203ENST00000467558 IGLV2-11P01706 119 aa10.4□□□□□ -0.75
BRAT1-203ENST00000467558 RPL39P62891 51 aaKnown RBP10.4□□□□□ -0.75
BRAT1-203ENST00000467558 NDUFA11Q86Y39 141 aa10.4□□□□□ -0.75
BRAT1-203ENST00000467558 LURAP1LQ8IV03 231 aa10.4□□□□□ -0.75
BRAT1-203ENST00000467558 POLQO75417 2590 aa10.39□□□□□ -0.75
BRAT1-203ENST00000467558 MRPL23Q16540 153 aaKnown RBP10.39□□□□□ -0.75
BRAT1-203ENST00000467558 ZFAND2AQ8N6M9 145 aa10.39□□□□□ -0.75
BRAT1-203ENST00000467558 ZMAT4Q9H898 229 aa10.39□□□□□ -0.75
BRAT1-203ENST00000467558 ZNF702PQ9H963 129 aa10.39□□□□□ -0.75
BRAT1-203ENST00000467558 PKD1L2Q7Z442 2459 aa10.39□□□□□ -0.75
BRAT1-203ENST00000467558 REV3LO60673 3130 aa10.39□□□□□ -0.75
BRAT1-203ENST00000467558 C9JAW5 83 aa10.39□□□□□ -0.75
BRAT1-203ENST00000467558 AVPP01185 164 aa10.39□□□□□ -0.75
BRAT1-203ENST00000467558 CELSR3Q9NYQ7 3312 aa10.39□□□□□ -0.75
BRAT1-203ENST00000467558 FASNP49327 2511 aaKnown RBP10.39□□□□□ -0.75
BRAT1-203ENST00000467558 TRAV8-3A0A0A6YYJ7 113 aa10.39□□□□□ -0.75
BRAT1-203ENST00000467558 TRAV8-4A0A0B4J246 113 aa10.38□□□□□ -0.75
BRAT1-203ENST00000467558 SH2D6Q7Z4S9 175 aa10.38□□□□□ -0.75
BRAT1-203ENST00000467558 CRLF1O75462 422 aa10.38□□□□□ -0.75
BRAT1-203ENST00000467558 SPATA12Q7Z6I5 190 aa10.38□□□□□ -0.75
BRAT1-203ENST00000467558 FN1P02751 2386 aaKnown RBP10.37□□□□□ -0.75
BRAT1-203ENST00000467558 TRBV10-1A0A0K0K1A3 114 aa10.37□□□□□ -0.75
BRAT1-203ENST00000467558 Q6ZS46 218 aa10.37□□□□□ -0.75
BRAT1-203ENST00000467558 XCL1P47992 114 aa10.37□□□□□ -0.75
BRAT1-203ENST00000467558 DEFB135Q30KP9 77 aa10.37□□□□□ -0.75
BRAT1-203ENST00000467558 CLPSL2Q6UWE3 100 aa10.37□□□□□ -0.75
BRAT1-203ENST00000467558 BAALCQ8WXS3 180 aa10.37□□□□□ -0.75
BRAT1-203ENST00000467558 SCRT2Q9NQ03 307 aa10.37□□□□□ -0.75
BRAT1-203ENST00000467558 C20orf203Q8NBC4 194 aa10.36□□□□□ -0.75
BRAT1-203ENST00000467558 HHLA3Q9XRX5 114 aa10.36□□□□□ -0.75
BRAT1-203ENST00000467558 NXPH4O95158 308 aa10.36□□□□□ -0.75
BRAT1-203ENST00000467558 FGF6P10767 208 aa10.36□□□□□ -0.75
BRAT1-203ENST00000467558 ODF1Q14990 250 aa10.36□□□□□ -0.75
BRAT1-203ENST00000467558 SLC25A29Q8N8R3 303 aa10.36□□□□□ -0.75
BRAT1-203ENST00000467558 SIGMAR1Q99720 223 aa10.36□□□□□ -0.75
BRAT1-203ENST00000467558 Q9H8V8 135 aa10.36□□□□□ -0.75
BRAT1-203ENST00000467558 C12orf74Q32Q52 190 aa10.36□□□□□ -0.75
BRAT1-203ENST00000467558 A0A1W2PPM0 123 aa10.35□□□□□ -0.75
BRAT1-203ENST00000467558 INAFM1C9JVW0 142 aa10.35□□□□□ -0.75
BRAT1-203ENST00000467558 DEFB125Q8N687 156 aa10.35□□□□□ -0.75
BRAT1-203ENST00000467558 RMI2Q96E14 147 aa10.35□□□□□ -0.75
BRAT1-203ENST00000467558 TP53TG3Q9ULZ0 132 aa10.35□□□□□ -0.75
BRAT1-203ENST00000467558 ICOSQ9Y6W8 199 aa10.35□□□□□ -0.75
BRAT1-203ENST00000467558 Q6ZQT7 251 aa10.35□□□□□ -0.75
BRAT1-203ENST00000467558 PRSS47A8MTI9 375 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 HERV-K104P63124 156 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 DOPEY1Q5JWR5 2465 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 MTORP42345 2549 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 K7EP34 96 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 KRTAP10-9P60411 292 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 C5orf38Q86SI9 138 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 MRAPQ8TCY5 172 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 LAMTOR3Q9UHA4 124 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 TRAV4A0A0B4J268 109 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 K7ERJ3 54 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 PLA2G2AP14555 144 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 LINC01006Q8NI28 216 aa10.34□□□□□ -0.75
BRAT1-203ENST00000467558 TRAV13-2A0A0B4J235 113 aa10.33□□□□□ -0.76
BRAT1-203ENST00000467558 A0A1B0GV72 72 aa10.33□□□□□ -0.76
BRAT1-203ENST00000467558 E9PLD3 99 aa10.33□□□□□ -0.76
BRAT1-203ENST00000467558 CRIP2P52943 208 aaPredicted RBP10.33□□□□□ -0.76
BRAT1-203ENST00000467558 UBE2WQ96B02 151 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms