RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 C2orf88Q9BSF0 95 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 TNFSF18Q9UNG2 199 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 BOD1L1Q8NFC6 3051 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 PDZD2O15018 2839 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 CSMD1Q96PZ7 3565 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 IGKV1D-17A0A075B6S4 117 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 LOC107986453A0A1B0GWG9 222 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 DLEU1O43261 78 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 CRPP02741 224 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 SLC25A5P05141 298 aaKnown RBP2.36□□□□□ -2.03
MSH2-205ENST00000467323 LINC00694P0DN24 101 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 HCP5Q6MZN7 132 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 Q8N814 137 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 FDCSPQ8NFU4 85 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 OR10AC1Q8NH08 325 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 MUCL1Q96DR8 90 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 SMR3AQ99954 134 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 LINC00470Q9BZP3 86 aa2.36□□□□□ -2.03
MSH2-205ENST00000467323 SNRNP200O75643 2136 aaKnown RBP2.36□□□□□ -2.03
MSH2-205ENST00000467323 IGKV2D-26A0A0A0MRZ7 120 aa2.35□□□□□ -2.03
MSH2-205ENST00000467323 TRGV4A0A0C4DH28 118 aa2.35□□□□□ -2.03
MSH2-205ENST00000467323 LINC00587B1AMM8 73 aa2.35□□□□□ -2.03
MSH2-205ENST00000467323 TRACP01848 142 aa2.35□□□□□ -2.03
MSH2-205ENST00000467323 HLA-DRB4P13762 266 aa2.35□□□□□ -2.03
MSH2-205ENST00000467323 ZNF93P35789 620 aaPredicted RBP2.35□□□□□ -2.03
MSH2-205ENST00000467323 DSCR4P56555 118 aaPredicted RBP2.35□□□□□ -2.03
MSH2-205ENST00000467323 CIRBPQ14011 172 aaKnown RBP2.35□□□□□ -2.03
MSH2-205ENST00000467323 TMEM91Q6ZNR0 172 aa2.35□□□□□ -2.03
MSH2-205ENST00000467323 DEFB106AQ8N104 65 aa2.35□□□□□ -2.03
MSH2-205ENST00000467323 HLA-DRB4X5D2U9 266 aa2.35□□□□□ -2.03
MSH2-205ENST00000467323 CHD3Q12873 2000 aaKnown RBP2.35□□□□□ -2.03
MSH2-205ENST00000467323 SETD2Q9BYW2 2564 aaPredicted RBP2.34□□□□□ -2.03
MSH2-205ENST00000467323 TRAV27A0A087WT01 109 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 TRAV12-1A0A0B4J245 112 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 MIF4GDA9UHW6 222 aaKnown RBP2.34□□□□□ -2.03
MSH2-205ENST00000467323 E7EUB6 86 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 H3BRN7 92 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 NPFFO15130 113 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 ZNF737O75373 536 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 IGLV1-51P01701 117 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 PRB2P02812 416 aaPredicted RBP2.34□□□□□ -2.03
MSH2-205ENST00000467323 EMX2Q04743 252 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 NEDD8Q15843 81 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 CRYBG3Q68DQ2 2970 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 IGFL3Q6UXB1 125 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 LINC00311Q8N616 119 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 SFT2D1Q8WV19 159 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 CLEC2BQ92478 149 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 TMEM203Q969S6 136 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 HIVEP1P15822 2718 aa2.34□□□□□ -2.03
MSH2-205ENST00000467323 SPG11Q96JI7 2443 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 CSMD2Q7Z408 3487 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 FBN3Q75N90 2809 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 INTS1Q8N201 2190 aaKnown RBP2.33□□□□□ -2.04
MSH2-205ENST00000467323 LRBAP50851 2863 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 GNG7O60262 68 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 SNRPD3P62318 126 aaKnown RBP2.33□□□□□ -2.04
MSH2-205ENST00000467323 BLCAPP62952 87 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 DIAPH2-AS1Q14236 149 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 C1orf134Q5TEV5 83 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 GLIPR1L1Q6UWM5 242 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 C2orf82Q6UX34 121 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 TEN1Q86WV5 123 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 OR5AK2Q8NH90 309 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 RAB37Q96AX2 223 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 COMMD3Q9UBI1 195 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 PRO0461Q9UI25 63 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 ABCA2Q9BZC7 2435 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 RP1L1Q8IWN7 2480 aaPredicted RBP2.33□□□□□ -2.04
MSH2-205ENST00000467323 OTOGQ6ZRI0 2925 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 CELSR2Q9HCU4 2923 aa2.33□□□□□ -2.04
MSH2-205ENST00000467323 KIAA2026Q5HYC2 2103 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 ZFHX3Q15911 3703 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 A0A087WSZ3 146 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 IGKV3D-11A0A0A0MRZ8 115 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 PNMA8CA0A1B0GUJ8 204 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 TCRBV4S1A1TA0A5B7 111 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 FAM25AB3EWG3 89 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 FAM25CB3EWG5 89 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 FAM25GB3EWG6 89 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 B4DSR2 109 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 F8W036 122 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 SLC25A4P12235 298 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 ETV6P41212 452 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 TPRXLQ17RH7 258 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 ASB16-AS1Q495Z4 193 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 ARPINQ7Z6K5 226 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 FKBP11Q9NYL4 201 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 METTL1Q9UBP6 276 aaKnown RBP2.32□□□□□ -2.04
MSH2-205ENST00000467323 APCP25054 2843 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 AKAP9Q99996 3911 aa2.32□□□□□ -2.04
MSH2-205ENST00000467323 CELSR1Q9NYQ6 3014 aa2.31□□□□□ -2.04
MSH2-205ENST00000467323 ADGRG4Q8IZF6 3080 aa2.31□□□□□ -2.04
MSH2-205ENST00000467323 CCDC168Q8NDH2 2452 aa2.31□□□□□ -2.04
MSH2-205ENST00000467323 CENPEQ02224 2701 aa2.31□□□□□ -2.04
MSH2-205ENST00000467323 CR1P17927 2039 aa2.31□□□□□ -2.04
MSH2-205ENST00000467323 C2orf70A6NJV1 201 aa2.31□□□□□ -2.04
MSH2-205ENST00000467323 ZNF670-ZNF695F2Z2N8 137 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms