RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 C12orf73Q69YU5 71 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 C5orf38Q86SI9 138 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 C10orf82Q8WW14 230 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 IFI27L1Q96BM0 104 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 DMAC1Q96GE9 116 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 WFDC10AQ9H1F0 79 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 ATG5Q9H1Y0 275 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 DPH3P1Q9H4G8 78 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 MRPL36Q9P0J6 103 aaKnown RBP1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 TENM1Q9UKZ4 2725 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 PARP14Q460N5 1801 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 ARFGEF1Q9Y6D6 1849 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 ABCC5O15440 1437 aa1.16□□□□□ -2.22
CDC42BPA-211ENST00000466538 TMEM262E9PQX1 116 aa1.16□□□□□ -2.22
CDC42BPA-211ENST00000466538 CBLN1P23435 193 aa1.16□□□□□ -2.22
CDC42BPA-211ENST00000466538 NDUFA11Q86Y39 141 aa1.16□□□□□ -2.22
CDC42BPA-211ENST00000466538 AMELYQ99218 206 aa1.16□□□□□ -2.22
CDC42BPA-211ENST00000466538 LINC00312Q9Y6C7 94 aa1.16□□□□□ -2.22
CDC42BPA-211ENST00000466538 AFDNP55196 1824 aaKnown RBP1.16□□□□□ -2.22
CDC42BPA-211ENST00000466538 TEX14Q8IWB6 1497 aa1.16□□□□□ -2.22
CDC42BPA-211ENST00000466538 FCGBPQ9Y6R7 5405 aaPredicted RBP1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 RBAKDNA6NC62 111 aa1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 FAM24AA6NFZ4 105 aa1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 GNG2P59768 71 aa1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 S100A10P60903 97 aa1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 RBM3P98179 157 aaKnown RBP1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 SPATA45Q537H7 98 aa1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 S100A7L2Q5SY68 101 aa1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 LINC00322Q6ZN03 302 aaPredicted RBP1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 C4orf33Q8N1A6 199 aa1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 LINC00474Q9P2X8 69 aa1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 MAGI1Q96QZ7 1491 aaPredicted RBP1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 SIPA1L3O60292 1781 aaPredicted RBP1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 MED12Q93074 2177 aa1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 DOCK2Q92608 1830 aa1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 PEAK1Q9H792 1746 aa1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 KDM6BO15054 1643 aa1.15□□□□□ -2.23
CDC42BPA-211ENST00000466538 TANC1Q9C0D5 1861 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 LOC285556D6RIA3 1793 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 COL4A6Q14031 1691 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 MED14O60244 1454 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 PXDNQ92626 1479 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 ROS1P08922 2347 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 KIAA0100Q14667 2235 aaKnown RBP1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 TRAV12-3A0A0B4J271 114 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 TCRBV3S1A0A5B6 114 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 HIGD1CA8MV81 97 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 SNRNP200O75643 2136 aaKnown RBP1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 UBE2D1P51668 147 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 SPTSSBQ8NFR3 76 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 AQP10Q96PS8 301 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 MRPL35Q9NZE8 188 aaKnown RBP1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 UNC79Q9P2D8 2635 aa1.14□□□□□ -2.23
CDC42BPA-211ENST00000466538 LAMC3Q9Y6N6 1575 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 SHANK2Q9UPX8 1470 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 PSME4Q14997 1843 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 SBF2Q86WG5 1849 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 PRDM2Q13029 1718 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 TRBV10-3A0A0K0K1G6 114 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 HCG22E2RYF7 251 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 MT-ATP8P03928 68 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 CCKP06307 115 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 RPL37AP61513 92 aaKnown RBP1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 CCL8P80075 99 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 COMMD6Q7Z4G1 85 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 PPP1R1CQ8WVI7 109 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 KRTAP4-1Q9BYQ7 146 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 ESPL1Q14674 2120 aa1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 BLMP54132 1417 aaPredicted RBP1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 KDM5AP29375 1690 aaKnown RBP1.13□□□□□ -2.23
CDC42BPA-211ENST00000466538 MAP2P11137 1827 aaKnown RBP1.12□□□□□ -2.23
CDC42BPA-211ENST00000466538 GAPVD1Q14C86 1478 aa1.12□□□□□ -2.23
CDC42BPA-211ENST00000466538 ABCA4P78363 2273 aa1.12□□□□□ -2.23
CDC42BPA-211ENST00000466538 A0A087WTM6 91 aa1.12□□□□□ -2.23
CDC42BPA-211ENST00000466538 UBE2L5PA0A1B0GUS4 154 aa1.12□□□□□ -2.23
CDC42BPA-211ENST00000466538 LOC101927531A0A1B0GV80 90 aa1.12□□□□□ -2.23
CDC42BPA-211ENST00000466538 PVALEFA0A1B0GWK0 134 aa1.12□□□□□ -2.23
CDC42BPA-211ENST00000466538 UBE2L3P68036 154 aaKnown RBP1.12□□□□□ -2.23
CDC42BPA-211ENST00000466538 COL5A1-AS1Q5SY13 56 aa1.12□□□□□ -2.23
CDC42BPA-211ENST00000466538 SCAPERQ9BY12 1400 aa1.12□□□□□ -2.23
CDC42BPA-211ENST00000466538 ARHGEF5Q12774 1597 aa1.12□□□□□ -2.23
CDC42BPA-211ENST00000466538 FYCO1Q9BQS8 1478 aa1.12□□□□□ -2.23
CDC42BPA-211ENST00000466538 PRDM15P57071 1507 aaPredicted RBP1.11□□□□□ -2.23
CDC42BPA-211ENST00000466538 H3BQ15 152 aa1.11□□□□□ -2.23
CDC42BPA-211ENST00000466538 SSSCA1O60232 199 aa1.11□□□□□ -2.23
CDC42BPA-211ENST00000466538 SIX6O95475 246 aa1.11□□□□□ -2.23
CDC42BPA-211ENST00000466538 FXYD4P59646 89 aa1.11□□□□□ -2.23
CDC42BPA-211ENST00000466538 DCDP81605 110 aaKnown RBP1.11□□□□□ -2.23
CDC42BPA-211ENST00000466538 FXYD3Q14802 87 aa1.11□□□□□ -2.23
CDC42BPA-211ENST00000466538 CYP2G1PQ6ZSU1 146 aa1.11□□□□□ -2.23
CDC42BPA-211ENST00000466538 C9orf62Q8N4C0 152 aa1.11□□□□□ -2.23
CDC42BPA-211ENST00000466538 C5orf56Q8N8D9 126 aa1.11□□□□□ -2.23
CDC42BPA-211ENST00000466538 AP4S1Q9Y587 144 aa1.11□□□□□ -2.23
CDC42BPA-211ENST00000466538 MARF1Q9Y4F3 1742 aaKnown RBP1.1□□□□□ -2.23
CDC42BPA-211ENST00000466538 TRAV13-2A0A0B4J235 113 aa1.1□□□□□ -2.23
CDC42BPA-211ENST00000466538 TEX49A0A1B0GTD5 131 aa1.1□□□□□ -2.23
CDC42BPA-211ENST00000466538 LINC00032P0C843 101 aa1.1□□□□□ -2.23
CDC42BPA-211ENST00000466538 ATP5EP56381 51 aaPredicted RBP1.1□□□□□ -2.23
CDC42BPA-211ENST00000466538 Q0VG73 95 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms