RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 RPRMQ9NS64 109 aa-0.34□□□□□ -2.46
LRCH3-211ENST00000466054 GSKIPQ9P0R6 139 aa-0.34□□□□□ -2.46
LRCH3-211ENST00000466054 ABCA2Q9BZC7 2435 aa-0.35□□□□□ -2.46
LRCH3-211ENST00000466054 PDZD2O15018 2839 aa-0.35□□□□□ -2.47
LRCH3-211ENST00000466054 SRRM2Q9UQ35 2752 aaKnown RBP-0.35□□□□□ -2.47
LRCH3-211ENST00000466054 AKAP14Q86UN6 197 aa-0.35□□□□□ -2.47
LRCH3-211ENST00000466054 IBTKQ9P2D0 1353 aaPredicted RBP-0.35□□□□□ -2.47
LRCH3-211ENST00000466054 GOLGA3Q08378 1498 aa-0.35□□□□□ -2.47
LRCH3-211ENST00000466054 HSPG2P98160 4391 aa-0.36□□□□□ -2.47
LRCH3-211ENST00000466054 MYH6P13533 1939 aa-0.36□□□□□ -2.47
LRCH3-211ENST00000466054 J3QR89 54 aa-0.36□□□□□ -2.47
LRCH3-211ENST00000466054 IFNA17P01571 189 aa-0.36□□□□□ -2.47
LRCH3-211ENST00000466054 RPL7L1Q6DKI1 246 aaKnown RBP-0.36□□□□□ -2.47
LRCH3-211ENST00000466054 WFDC6Q9BQY6 131 aa-0.36□□□□□ -2.47
LRCH3-211ENST00000466054 NEBP20929 6669 aa-0.36□□□□□ -2.47
LRCH3-211ENST00000466054 ZANQ9Y493 2812 aa-0.37□□□□□ -2.47
LRCH3-211ENST00000466054 DAPK1P53355 1430 aa-0.37□□□□□ -2.47
LRCH3-211ENST00000466054 A6NIN4 97 aa-0.37□□□□□ -2.47
LRCH3-211ENST00000466054 UBE2D1P51668 147 aa-0.37□□□□□ -2.47
LRCH3-211ENST00000466054 CKS1BP61024 79 aa-0.37□□□□□ -2.47
LRCH3-211ENST00000466054 CTAGE3PQ8IX95 158 aa-0.37□□□□□ -2.47
LRCH3-211ENST00000466054 CYP4F30PQ9H0H9 118 aa-0.37□□□□□ -2.47
LRCH3-211ENST00000466054 FAT1Q14517 4588 aa-0.37□□□□□ -2.47
LRCH3-211ENST00000466054 TMEM2Q9UHN6 1383 aa-0.37□□□□□ -2.47
LRCH3-211ENST00000466054 PRG4Q92954 1404 aaPredicted RBP-0.38□□□□□ -2.47
LRCH3-211ENST00000466054 CHD9Q3L8U1 2897 aa-0.38□□□□□ -2.47
LRCH3-211ENST00000466054 KMT2AQ03164 3969 aa-0.38□□□□□ -2.47
LRCH3-211ENST00000466054 TRBV10-3A0A0K0K1G6 114 aa-0.38□□□□□ -2.47
LRCH3-211ENST00000466054 ZNF815PA8K554 130 aa-0.38□□□□□ -2.47
LRCH3-211ENST00000466054 M0R129 80 aa-0.38□□□□□ -2.47
LRCH3-211ENST00000466054 KRTAP19-7Q3SYF9 63 aa-0.38□□□□□ -2.47
LRCH3-211ENST00000466054 Q5VV11 94 aa-0.38□□□□□ -2.47
LRCH3-211ENST00000466054 C10orf82Q8WW14 230 aa-0.38□□□□□ -2.47
LRCH3-211ENST00000466054 SMIM3Q9BZL3 60 aa-0.38□□□□□ -2.47
LRCH3-211ENST00000466054 HYDINQ4G0P3 5121 aa-0.39□□□□□ -2.47
LRCH3-211ENST00000466054 ARHGEF10O15013 1369 aa-0.39□□□□□ -2.47
LRCH3-211ENST00000466054 G3V318 75 aa-0.39□□□□□ -2.47
LRCH3-211ENST00000466054 PIN1P1O15428 100 aa-0.39□□□□□ -2.47
LRCH3-211ENST00000466054 PITX3O75364 302 aa-0.39□□□□□ -2.47
LRCH3-211ENST00000466054 LINC00694P0DN24 101 aa-0.39□□□□□ -2.47
LRCH3-211ENST00000466054 Q6ZUT4 128 aa-0.39□□□□□ -2.47
LRCH3-211ENST00000466054 SSBP3-AS1Q7Z2R9 100 aa-0.39□□□□□ -2.47
LRCH3-211ENST00000466054 PSMG3Q9BT73 122 aaPredicted RBP-0.39□□□□□ -2.47
LRCH3-211ENST00000466054 CNFNQ9BYD5 112 aa-0.39□□□□□ -2.47
LRCH3-211ENST00000466054 CACNA1AO00555 2505 aa-0.39□□□□□ -2.47
LRCH3-211ENST00000466054 A0A0D9SFI3 127 aa-0.4□□□□□ -2.47
LRCH3-211ENST00000466054 CLPSL1A2RUU4 121 aa-0.4□□□□□ -2.47
LRCH3-211ENST00000466054 M0R2Z0 102 aa-0.4□□□□□ -2.47
LRCH3-211ENST00000466054 SPINK8P0C7L1 97 aa-0.4□□□□□ -2.47
LRCH3-211ENST00000466054 PIPP12273 146 aaPredicted RBP-0.4□□□□□ -2.47
LRCH3-211ENST00000466054 UBE2G1P62253 170 aa-0.4□□□□□ -2.47
LRCH3-211ENST00000466054 SCIMPQ6UWF3 145 aa-0.4□□□□□ -2.47
LRCH3-211ENST00000466054 LPAP08519 4548 aa-0.4□□□□□ -2.47
LRCH3-211ENST00000466054 HECTD4Q9Y4D8 3996 aa-0.41□□□□□ -2.47
LRCH3-211ENST00000466054 LRRC37A3O60309 1634 aa-0.41□□□□□ -2.47
LRCH3-211ENST00000466054 FLNAP21333 2647 aaKnown RBP-0.41□□□□□ -2.47
LRCH3-211ENST00000466054 RYR3Q15413 4870 aa-0.41□□□□□ -2.47
LRCH3-211ENST00000466054 BIVM-ERCC5R4GMW8 1640 aa-0.41□□□□□ -2.47
LRCH3-211ENST00000466054 TRAV1-2A0A0B4J238 106 aa-0.41□□□□□ -2.48
LRCH3-211ENST00000466054 APOC4-APOC2K7ER74 178 aa-0.41□□□□□ -2.48
LRCH3-211ENST00000466054 CFDP00746 253 aaPredicted RBP-0.41□□□□□ -2.48
LRCH3-211ENST00000466054 RRAS2P62070 204 aaPredicted RBP-0.41□□□□□ -2.48
LRCH3-211ENST00000466054 ZNF818PQ6ZRF7 136 aa-0.41□□□□□ -2.48
LRCH3-211ENST00000466054 LAMA5O15230 3695 aa-0.42□□□□□ -2.48
LRCH3-211ENST00000466054 ARPC5O15511 151 aa-0.42□□□□□ -2.48
LRCH3-211ENST00000466054 IL5P05113 134 aa-0.42□□□□□ -2.48
LRCH3-211ENST00000466054 LZICQ8WZA0 190 aa-0.42□□□□□ -2.48
LRCH3-211ENST00000466054 MYCBP2O75592 4640 aa-0.42□□□□□ -2.48
LRCH3-211ENST00000466054 ZMYM4Q5VZL5 1548 aa-0.43□□□□□ -2.48
LRCH3-211ENST00000466054 CBLN1P23435 193 aa-0.43□□□□□ -2.48
LRCH3-211ENST00000466054 RYR1P21817 5038 aa-0.43□□□□□ -2.48
LRCH3-211ENST00000466054 NHSL1Q5SYE7 1610 aa-0.43□□□□□ -2.48
LRCH3-211ENST00000466054 UBR4Q5T4S7 5183 aa-0.43□□□□□ -2.48
LRCH3-211ENST00000466054 IFT172Q9UG01 1749 aa-0.44□□□□□ -2.48
LRCH3-211ENST00000466054 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.44□□□□□ -2.48
LRCH3-211ENST00000466054 FHAD1B1AJZ9 1412 aa-0.44□□□□□ -2.48
LRCH3-211ENST00000466054 MYH9P35579 1960 aaKnown RBP-0.44□□□□□ -2.48
LRCH3-211ENST00000466054 K7ERU9 68 aa-0.44□□□□□ -2.48
LRCH3-211ENST00000466054 SMIM6P0DI80 62 aa-0.44□□□□□ -2.48
LRCH3-211ENST00000466054 BAGE3Q86Y29 109 aa-0.44□□□□□ -2.48
LRCH3-211ENST00000466054 SPTSSAQ969W0 71 aa-0.44□□□□□ -2.48
LRCH3-211ENST00000466054 NCOR1O75376 2440 aa-0.44□□□□□ -2.48
LRCH3-211ENST00000466054 CEP152O94986 1710 aa-0.44□□□□□ -2.48
LRCH3-211ENST00000466054 USH2AO75445 5202 aa-0.44□□□□□ -2.48
LRCH3-211ENST00000466054 CREBBPQ92793 2442 aa-0.45□□□□□ -2.48
LRCH3-211ENST00000466054 HIVEP1P15822 2718 aa-0.45□□□□□ -2.48
LRCH3-211ENST00000466054 NPFFO15130 113 aa-0.45□□□□□ -2.48
LRCH3-211ENST00000466054 NDUFB6O95139 128 aa-0.45□□□□□ -2.48
LRCH3-211ENST00000466054 GUCA1AP43080 201 aaPredicted RBP-0.45□□□□□ -2.48
LRCH3-211ENST00000466054 PRO0255Q9UI72 69 aa-0.45□□□□□ -2.48
LRCH3-211ENST00000466054 STARD9Q9P2P6 4700 aa-0.45□□□□□ -2.48
LRCH3-211ENST00000466054 KIAA1109Q2LD37 5005 aa-0.45□□□□□ -2.48
LRCH3-211ENST00000466054 SETXQ7Z333 2677 aaKnown RBP-0.45□□□□□ -2.48
LRCH3-211ENST00000466054 EPPK1P58107 5090 aaKnown RBP-0.45□□□□□ -2.48
LRCH3-211ENST00000466054 TENM2Q9NT68 2774 aa-0.46□□□□□ -2.48
LRCH3-211ENST00000466054 NF1P21359 2839 aa-0.46□□□□□ -2.48
LRCH3-211ENST00000466054 MAP1AP78559 2803 aaPredicted RBP-0.46□□□□□ -2.48
LRCH3-211ENST00000466054 FAM208BQ5VWN6 2430 aa-0.46□□□□□ -2.48
LRCH3-211ENST00000466054 SPTBN2O15020 2390 aa-0.47□□□□□ -2.48
LRCH3-211ENST00000466054 FAM92AA1XBS5 289 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms