RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	NUPR1	O60356	82 aa		6.28	□□□□□ -1.4
UBA3-208	ENST00000465627	ESD	P10768	282 aa		6.28	□□□□□ -1.4
UBA3-208	ENST00000465627	GATA1	P15976	413 aa	Predicted RBP	6.28	□□□□□ -1.4
UBA3-208	ENST00000465627	HOXA5	P20719	270 aa		6.28	□□□□□ -1.4
UBA3-208	ENST00000465627	RRN3P1	Q2M238	152 aa		6.28	□□□□□ -1.4
UBA3-208	ENST00000465627	DEFB135	Q30KP9	77 aa		6.28	□□□□□ -1.4
UBA3-208	ENST00000465627	CFAP126	Q5VTH2	177 aa		6.28	□□□□□ -1.4
UBA3-208	ENST00000465627	SYT8	Q8NBV8	401 aa		6.28	□□□□□ -1.4
UBA3-208	ENST00000465627	C18orf15	Q96N68	181 aa		6.28	□□□□□ -1.4
UBA3-208	ENST00000465627	TP53TG1	Q9Y2A0	90 aa		6.28	□□□□□ -1.4
UBA3-208	ENST00000465627	IGLV2-18	A0A075B6J9	118 aa		6.27	□□□□□ -1.41
UBA3-208	ENST00000465627	LOC105371267	A0A1B0GV96	52 aa		6.27	□□□□□ -1.41
UBA3-208	ENST00000465627		A8MWV9	139 aa		6.27	□□□□□ -1.41
UBA3-208	ENST00000465627	SMKR1	H3BMG3	65 aa		6.27	□□□□□ -1.41
UBA3-208	ENST00000465627	NPY	P01303	97 aa		6.27	□□□□□ -1.41
UBA3-208	ENST00000465627	PPBP	P02775	128 aa		6.27	□□□□□ -1.41
UBA3-208	ENST00000465627		Q6ZTI0	123 aa		6.27	□□□□□ -1.41
UBA3-208	ENST00000465627	ORMDL3	Q8N138	153 aa		6.27	□□□□□ -1.41
UBA3-208	ENST00000465627	MRAP2	Q96G30	205 aa		6.27	□□□□□ -1.41
UBA3-208	ENST00000465627	MRPL16	Q9NX20	251 aa	Known RBP	6.27	□□□□□ -1.41
UBA3-208	ENST00000465627	LAMTOR2	Q9Y2Q5	125 aa		6.27	□□□□□ -1.41
UBA3-208	ENST00000465627	PLEC	Q15149	4684 aa	Known RBP	6.26	□□□□□ -1.41
UBA3-208	ENST00000465627		A0A087WWL8	130 aa		6.26	□□□□□ -1.41
UBA3-208	ENST00000465627	TRAV26-2	A0A0B4J265	109 aa		6.26	□□□□□ -1.41
UBA3-208	ENST00000465627	LINC01546	A6NGU7	62 aa		6.26	□□□□□ -1.41
UBA3-208	ENST00000465627		M0QY20	66 aa		6.26	□□□□□ -1.41
UBA3-208	ENST00000465627	NCR2	O95944	276 aa		6.26	□□□□□ -1.41
UBA3-208	ENST00000465627	NDUFA6	P56556	154 aa		6.26	□□□□□ -1.41
UBA3-208	ENST00000465627	SNRPE	P62304	92 aa	Known RBP	6.26	□□□□□ -1.41
UBA3-208	ENST00000465627	IQCJ	Q1A5X6	159 aa		6.26	□□□□□ -1.41
UBA3-208	ENST00000465627	ZFP2	Q6ZN57	461 aa		6.26	□□□□□ -1.41
UBA3-208	ENST00000465627		Q6ZSN1	163 aa		6.26	□□□□□ -1.41
UBA3-208	ENST00000465627	SMIM15	Q7Z3B0	74 aa		6.26	□□□□□ -1.41
UBA3-208	ENST00000465627	HIST3H2BB	Q8N257	126 aa		6.26	□□□□□ -1.41
UBA3-208	ENST00000465627	PRELID3A	Q96N28	172 aa		6.26	□□□□□ -1.41
UBA3-208	ENST00000465627	NOP10	Q9NPE3	64 aa	Known RBP	6.26	□□□□□ -1.41
UBA3-208	ENST00000465627	IGHV4-28	A0A0C4DH34	117 aa		6.25	□□□□□ -1.41
UBA3-208	ENST00000465627	TRBV6-5	A0A0K0K1A5	114 aa		6.25	□□□□□ -1.41
UBA3-208	ENST00000465627	TNFRSF6B	O95407	300 aa		6.25	□□□□□ -1.41
UBA3-208	ENST00000465627	MIF	P14174	115 aa		6.25	□□□□□ -1.41
UBA3-208	ENST00000465627	CKS2	P33552	79 aa		6.25	□□□□□ -1.41
UBA3-208	ENST00000465627	SUMO4	Q6EEV6	95 aa		6.25	□□□□□ -1.41
UBA3-208	ENST00000465627	OR11H2	Q8NH07	326 aa		6.25	□□□□□ -1.41
UBA3-208	ENST00000465627	MUC7	Q8TAX7	377 aa		6.25	□□□□□ -1.41
UBA3-208	ENST00000465627	KRTAP4-11	Q9BYQ6	195 aa		6.25	□□□□□ -1.41
UBA3-208	ENST00000465627	TRAV4	A0A0B4J268	109 aa		6.24	□□□□□ -1.41
UBA3-208	ENST00000465627	SERF1A	O75920	110 aa		6.24	□□□□□ -1.41
UBA3-208	ENST00000465627	IGHV3-53	P01767	116 aa		6.24	□□□□□ -1.41
UBA3-208	ENST00000465627	RPL32	P62910	135 aa	Known RBP	6.24	□□□□□ -1.41
UBA3-208	ENST00000465627	RPL39L	Q96EH5	51 aa	Known RBP	6.24	□□□□□ -1.41
UBA3-208	ENST00000465627	TM2D3	Q9BRN9	247 aa		6.24	□□□□□ -1.41
UBA3-208	ENST00000465627	ALMS1	Q8TCU4	4167 aa		6.24	□□□□□ -1.41
UBA3-208	ENST00000465627	DNAH10	Q8IVF4	4471 aa		6.23	□□□□□ -1.41
UBA3-208	ENST00000465627	TRGV1	A0A0A0MS02	117 aa		6.23	□□□□□ -1.41
UBA3-208	ENST00000465627	RHOD	O00212	210 aa		6.23	□□□□□ -1.41
UBA3-208	ENST00000465627	POLR2K	P53803	58 aa	Known RBP	6.23	□□□□□ -1.41
UBA3-208	ENST00000465627	DEFB121	Q5J5C9	76 aa		6.23	□□□□□ -1.41
UBA3-208	ENST00000465627	NIT1	Q86X76	327 aa		6.23	□□□□□ -1.41
UBA3-208	ENST00000465627	SBSPON	Q8IVN8	264 aa		6.23	□□□□□ -1.41
UBA3-208	ENST00000465627	ZNF479	Q96JC4	524 aa		6.23	□□□□□ -1.41
UBA3-208	ENST00000465627	PACRG	Q96M98	296 aa	Predicted RBP	6.23	□□□□□ -1.41
UBA3-208	ENST00000465627	C20orf78	Q9BR46	151 aa		6.23	□□□□□ -1.41
UBA3-208	ENST00000465627	RETN	Q9HD89	108 aa		6.23	□□□□□ -1.41
UBA3-208	ENST00000465627	DKK2	Q9UBU2	259 aa		6.23	□□□□□ -1.41
UBA3-208	ENST00000465627		Q9UF83	564 aa		6.23	□□□□□ -1.41
UBA3-208	ENST00000465627		A0A096LNJ9	63 aa		6.22	□□□□□ -1.41
UBA3-208	ENST00000465627	LYRM9	A8MSI8	78 aa		6.22	□□□□□ -1.41
UBA3-208	ENST00000465627	S100A6	P06703	90 aa		6.22	□□□□□ -1.41
UBA3-208	ENST00000465627	MGP	P08493	103 aa		6.22	□□□□□ -1.41
UBA3-208	ENST00000465627	SMIM17	P0DL12	118 aa		6.22	□□□□□ -1.41
UBA3-208	ENST00000465627	IFI27	P40305	119 aa	Predicted RBP	6.22	□□□□□ -1.41
UBA3-208	ENST00000465627	FAM74A4	Q5TZK3	123 aa		6.22	□□□□□ -1.41
UBA3-208	ENST00000465627	HIST1H2BL	Q99880	126 aa		6.22	□□□□□ -1.41
UBA3-208	ENST00000465627	CELA1	Q9UNI1	258 aa		6.22	□□□□□ -1.41
UBA3-208	ENST00000465627	GAGE12B	A1L429	117 aa		6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	KRTAP9-7	A8MTY7	169 aa		6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	CIDEA	O60543	219 aa		6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	GAGE7	O76087	117 aa		6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	LINC00614	P0C842	121 aa		6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	GAGE12F	P0CL80	117 aa		6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	GAGE12G	P0CL81	117 aa		6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	GAGE12I	P0CL82	117 aa		6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	SUMO2	P61956	95 aa	Known RBP	6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	FHL2	Q14192	279 aa		6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	FAM222A	Q5U5X8	452 aa		6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	BAGE3	Q86Y29	109 aa		6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	CHCHD1	Q96BP2	118 aa	Known RBP	6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	C11orf68	Q9H3H3	251 aa	Known RBP	6.21	□□□□□ -1.41
UBA3-208	ENST00000465627	IGHV3-73	A0A0B4J1V6	119 aa		6.2	□□□□□ -1.42
UBA3-208	ENST00000465627	TRBV27	A0A0K0K1C4	114 aa		6.2	□□□□□ -1.42
UBA3-208	ENST00000465627	DEFB4A	O15263	64 aa		6.2	□□□□□ -1.42
UBA3-208	ENST00000465627	PPP1R17	O96001	155 aa		6.2	□□□□□ -1.42
UBA3-208	ENST00000465627		P0DMU3	169 aa		6.2	□□□□□ -1.42
UBA3-208	ENST00000465627	FAM231A	P0DMU4	169 aa		6.2	□□□□□ -1.42
UBA3-208	ENST00000465627	FAM231C	P0DMU5	169 aa		6.2	□□□□□ -1.42
UBA3-208	ENST00000465627	LINC00694	P0DN24	101 aa		6.2	□□□□□ -1.42
UBA3-208	ENST00000465627	ZNF56	Q15929	161 aa		6.2	□□□□□ -1.42
UBA3-208	ENST00000465627		Q8N8P6	123 aa		6.2	□□□□□ -1.42
UBA3-208	ENST00000465627	OR4C5	Q8NGB2	326 aa		6.2	□□□□□ -1.42
UBA3-208	ENST00000465627	TMEM70	Q9BUB7	260 aa		6.2	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms